Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_001331.1 Length=7349 Score E Sequences producing significant alignments: (Bits) Value seq1197 136 2e-28 >seq1197 Length=5327 Score = 136 bits (150), Expect = 2e-28 Identities = 295/429 (69%), Gaps = 18/429 (4%) Strand=Plus/Minus Query 4505 GTTCACCGACTTGTCAGGCGTGCGGATCCTGCGGTGCGGCGTGGACACCGTGCGGCAGTT 4564 |||||||||| |||||||||| || | || || || || || || ||||| || ||| | Sbjct 1566 GTTCACCGACCTGTCAGGCGTCCGCCTGCTTCGCTGTGGTGTCGATACCGTCCGCCAGCT 1507 Query 4565 GTACAACGGCAAGCTCCGGCCGGAAGTCATGGCGCTGTTTGACCTGTCGGT---GGATGT 4621 ||| ||| | | || || || || || ||||||| | || | | ||| | Sbjct 1506 CTACGCCGGTCTGTTGCGTCCTGACTTCCTGTCGCTGTTCGG--TGACAATCCCGGAA-T 1450 Query 4622 GGTCGAGTTCGCCGGCTA-CGAATGGTCCAAGGG--CCGTATCGGTCGCGACTCTGGCTA 4678 ||| || ||||| ||||| || | |||| | | ||| | ||||| || || ||||| Sbjct 1449 GGTTGATTTCGCGGGCTATCG---GTTCCATGCGTCCCGCGTGGGTCGTGATTCCGGCTA 1393 Query 4679 TCAGTACCGCCTGCAGAACGCCGAAATGGGCCTGATCCTGCTGATCAAGAACCACAACAT 4738 ||| | | || ||||| ||||| | || |||||||||||||||||||| |||| | Sbjct 1392 TCAATTCAAGCTCCAGAATGCCGACCTCGGTCTGATCCTGCTGATCAAGAATTTCAACGT 1333 Query 4739 CAAGGTCGACACCATTGGCTCGCACCTCAAGATCGAGGTGTCGCCCCACGCCATTGACGG 4798 || | ||| || || ||||||| || ||||| || |||||||||||||| || | Sbjct 1332 TAAAATTGACGTGATCGGGCCGCACCTGAAAATCGAAGTTTCGCCCCACGCCATCGA-TG 1274 Query 4799 CGC-CGACCCGCGTATCCTCCAGGGCGTGCTGGATGACCTGGCCGCAGCG-GTGCTGAGT 4856 ||| || || |||||| | ||| ||||| ||| || ||| | ||| Sbjct 1273 CGCATGAACCTGACCGCCTCCAAGCCGTTATGGATCGCCTCGC--CAGTGAATGCATGTC 1216 Query 4857 CACTG-CGAGACCAACCAAGCAGCTGTGCATATCGCGCTGGATGTGCAGGGCTGGACGCC 4915 | | | |||| | || || ||||| ||| | ||||| ||| | |||||||||||||| Sbjct 1215 CGCAGTCGAGCCTAAGCAGTGCGCTGTTCATCTTGCGCTTGATTTTCAGGGCTGGACGCC 1156 Query 4916 TCCGGCTGA 4924 |||| ||| Sbjct 1155 ACCGGATGA 1147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23401161395512