Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq65429 221 4e-54 >seq65429 Length=594 Score = 221 bits (244), Expect = 4e-54 Identities = 333/467 (71%), Gaps = 10/467 (2%) Strand=Plus/Minus Query 3197 TACGCTAAATTACATACGGAACAGGAACGTGATTACTTCATGACCCGTTACCGTGACATT 3256 || ||||| || ||||| || || |||||||||||||||||| ||||||| ||| || Sbjct 520 TATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTT 461 Query 3257 ATGAAAGAGTTCGGCGGTCATACATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATG 3316 || || || || | || || ||||| | |||||| |||||| | || ||||| Sbjct 460 ATTTCTTCATTTGGAGGCAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATG 401 Query 3317 CGCTCTGAATTTTGGGCATCTGGCTATGACGTAGACGGTACTGACCAATCTTCTCTCGGT 3376 |||||| | | ||||||||||||||||| || || || ||||||||| | || | || Sbjct 400 CGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGC 341 Query 3377 CAATTCTCTGGTCGCGTTCAGCAGACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCT 3436 || || |||||||| ||||| ||||||| || || || || || |||| ||||||| Sbjct 340 CAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCT 281 Query 3437 GAGCATCGCGTAATTATGACTCTGGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGG 3494 |||||| || || | ||||| ||| || ||| |||||||||||| | ||| | Sbjct 280 GAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--G 223 Query 3495 AAATGCACTATCTTGTAGGTAAAGAAAACTTAACTTATACCGATATTGCTTGTGACCCTG 3554 | || || || ||| | ||||| || |||||||||||||||||| | ||||||| Sbjct 222 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 163 Query 3555 CACTG-ATGGCTAACCTGCCACCTCGTGAAGTATCCTTAAAAGAATTCTTCC--ACTCCT 3611 || ||||| || |||| || |||||| | || | || || | |||| || | Sbjct 162 TTTTGTATGGC-GACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 104 Query 3612 CACCCGATTCTGCTAAATTCAAAATCGCTGAGGGCCAATGGTATCGT 3658 | || ||| || || || || |||||||| || ||||||||| Sbjct 103 GATTCG--TCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17717159170520