Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq65429 935 0.0 >seq65429 Length=594 Score = 935 bits (1036), Expect = 0.0 Identities = 556/581 (96%), Gaps = 0/581 (0%) Strand=Plus/Minus Query 1536 AGCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTG 1595 |||| | || |||| || |||| | | ||||||| ||||||| | || | Sbjct 582 AGCTATAACGACAAAAAACCACTTAAAAAAAATCTATTCACATTATCATTAAAAAAAATT 523 Query 1596 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 1655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 522 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 463 Query 1656 TTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 1715 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 462 TTATTTCTTCATTTGGAGGCAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 403 Query 1716 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 1775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 402 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 343 Query 1776 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 1835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 342 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 283 Query 1836 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAG 1895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAG 223 Query 1896 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 1955 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 163 Query 1956 TTTTGTATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTG 2015 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 TTTTGTATGGCGACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTG 103 Query 2016 ATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATG 2075 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 102 ATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATG 43 Query 2076 TTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATT 2116 ||||||||||||||||||||||||||||||||||||||||| Sbjct 42 TTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATTCATT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17106553360060