Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_001730.1 Length=6089 Score E Sequences producing significant alignments: (Bits) Value seq65429 228 3e-56 >seq65429 Length=594 Score = 228 bits (252), Expect = 3e-56 Identities = 329/464 (71%), Gaps = 0/464 (0%) Strand=Plus/Minus Query 3658 CTTATGCGCAGCTTCACACTGAGCAGGAGCGTACTTATTTTATGCAGCGTTACCGTGATG 3717 ||||||| | | || ||||| || || ||| ||| || ||||||||||||| ||||| Sbjct 522 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 463 Query 3718 TTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTA 3777 |||| || ||||| || |||||| ||||| || || ||||| || || ||||| | Sbjct 462 TTATTTCTTCATTTGGAGGCAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 403 Query 3778 TGCATACCGATTTTTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTTG 3837 ||| | || | ||||| || || || || ||||| || || |||||| | || | | Sbjct 402 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 343 Query 3838 GACAGTTTTCGGGGCGAGTTCAACAGACGTTTAAACACTCAGTGCCGCGATTCTTCGTGC 3897 | |||||||| || || ||||||||||| | |||||| || |||||||| ||||| || | Sbjct 342 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 283 Query 3898 CTGAGCATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCAGTCCTTTGG 3957 |||||||||| ||| | ||| | ||| ||||| || ||||||| || | Sbjct 282 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAG 223 Query 3958 AGCATCATTATCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCTGGTGACCCGG 4017 || ||| || ||| | | | ||||||||||||||| ||||||| ||||| | Sbjct 222 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 163 Query 4018 CTTTGATTGGTAATTTGCCGCCGCGTGAGATTTCTTATCAGGACCTTTTCCGTGATGGTC 4077 |||| ||| | |||||||||||||| |||||| |||| |||||||| |||| Sbjct 162 TTTTGTATGGCGACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTG 103 Query 4078 GCCCGGGCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGT 4121 || | ||| ||||| |||| ||| | ||||||||| Sbjct 102 ATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19350231465328