Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq65429 208 3e-50 >seq65429 Length=594 Score = 208 bits (230), Expect = 3e-50 Identities = 332/469 (71%), Gaps = 12/469 (3%) Strand=Plus/Minus Query 3141 CTTATGCTAAATTGCACACCCAACAAGAACGTGACTACTTCATGACTCGCTATCGCGATA 3200 |||||||||| ||||| || | ||||||||||| ||||||||| || || | ||| Sbjct 522 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 463 Query 3201 TTATGAAAGACTTCGGAGGTCACACCTCCTATGACGGTGATAACCGTCCTCTGCTGCTTA 3260 |||| || ||||| | ||||| ||||||| ||| ||||||||| | || | | Sbjct 462 TTATTTCTTCATTTGGAGGCAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 403 Query 3261 TGCGCTCTGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAATCCTCTTTAG 3320 |||||||| | | ||||| ||||||||||| || || || ||||||||| | || |||| Sbjct 402 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 343 Query 3321 GTCAGTTCTCCGGTCGCGTCCAACAAACATTCAATCACAAAGTACCTCGCTTCTATGTAC 3380 | ||||| || ||||| || ||||| || | || || || || || |||| ||| | Sbjct 342 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 283 Query 3381 CTGAACACGGCGTCATTATGACTCTCGCCGTTACTCGCTTCCCTCCTACT--CATGAAAT 3438 |||| || ||| || | ||||| || || ||| || || |||||| | ||| Sbjct 282 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA- 224 Query 3439 GGAGATGCACTATCTTGTCGGTAAAGAATCTTTAACCTATACCGACCTCGCCTGCGACCC 3498 ||||| || || ||| || ||||| |||| || |||||||| | || ||||||| Sbjct 223 -GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCC 165 Query 3499 TGCTCT-TATGGCTAACCTGCCTCCGCGCGAAGTATCCCTTAAGGAATTCTTCCACTCCT 3557 || | | |||||| || |||| ||||| ||| | || | ||||| | |||| | || Sbjct 164 TGTTTTGTATGGC-GACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCC-GTTCT 107 Query 3558 CGCCGGACTCCGCT---AAGTTCAAAATTGCCGAGGGCCAATGGTATCG 3603 | || || || ||||| || ||||| ||||| || |||||||| Sbjct 106 GG--TGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCG 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17426242266060