Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq65429 226 1e-55 >seq65429 Length=594 Score = 226 bits (250), Expect = 1e-55 Identities = 367/521 (70%), Gaps = 13/521 (2%) Strand=Plus/Minus Query 3153 TATGCTAAACTCCACACTGAACAGGAACGTGACTATTTCATGACTCGCTACCGCGATATT 3212 |||||||| | || ||||| || |||||||| || |||||| || |||| ||| || Sbjct 520 TATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTT 461 Query 3213 ATGAAAGACTTTGGCGGTCACACCTCCTACGACGGTGATAACCGTCCTCTGCTCCTGATG 3272 || ||||| || | ||||| || |||| ||| ||||||||| | || | ||| Sbjct 460 ATTTCTTCATTTGGAGGCAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATG 401 Query 3273 CGCTCTGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAAACTTCATTGGGT 3332 |||||| | | ||||| ||||||||||| || || || ||||||||||| || || || Sbjct 400 CGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGC 341 Query 3333 CAGTTCTCTGGTCGCGTCCAACAAACCTTTAATCATAAAGTGCCTCGCTTCTATGTTCCT 3392 ||||| |||||||| || ||||| |||| ||| ||| ||||| || |||| ||||||| Sbjct 340 CAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCT 281 Query 3393 GAGCATGGCGTAATTATGACTTTATCTGTTACTCGCTTCCCTCCTACT--CACGAAATGG 3450 ||||||||| || | ||| | | || ||| || || |||||| || ||| | Sbjct 280 GAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--G 223 Query 3451 AAATGCACTATCTCGTCGGTAAGGAATCTCTGACTTATACTGACATTGCCTGTGACCCTG 3510 | || || || || || ||| | || |||||||||| || ||||| | ||||||| Sbjct 222 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 163 Query 3511 CTCT-TATGGCTAACCTGCCTCCGCGTGAAATTGAGGTAAAAGACCTCTTTCACTCTGCT 3569 | | |||||| || |||| |||||||||||| | || || | || | |||| | Sbjct 162 TTTTGTATGGC-GACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGT 104 Query 3570 GGT---ACTGGTAAATTCAAAATTGCCGAAGGTCAATGGTATCGTACTCAGCCTGACCGC 3626 | | || || || || ||||| || ||||| ||||||||| | |||| Sbjct 103 GATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTAT 44 Query 3627 GTTGCCTTCC--CTTATAACGCTCTTGACGGCTTCCCTTTC 3665 ||| | ||| ||||| || |||||| |||||||| ||| Sbjct 43 GTTTC--TCCTGCTTATCACCTTCTTGAAGGCTTCCCATTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17426242266060