Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_012868.1 Length=6094 Score E Sequences producing significant alignments: (Bits) Value seq65429 233 7e-58 >seq65429 Length=594 Score = 233 bits (258), Expect = 7e-58 Identities = 330/464 (71%), Gaps = 0/464 (0%) Strand=Plus/Minus Query 3661 CTTATGCGCAGCTTCATACTGAGCAGGAGCGTACTTATTTCATGCAGCGTTATCGTGATG 3720 ||||||| | | |||||||| || || ||| ||| |||||||||||||| | ||||| Sbjct 522 CTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATG 463 Query 3721 TTATCTCCAGCTTTGGCGGTTCAACCTCCTATGATGCCGATAACCGACCGTTGCTTGTTA 3780 |||| || ||||| || |||||| ||||| || || ||||| || || ||||| | Sbjct 462 TTATTTCTTCATTTGGAGGCAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCA 403 Query 3781 TGCACACCGATTTCTGGGCTTCCGGTTACGACGTTGACGGTACCGACCAATCTTCCCTCG 3840 ||| | | || ||||||| || || || || ||||| || || |||||| | || | | Sbjct 402 TGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAG 343 Query 3841 GACAGTTTTCGGGTCGAGTCCAACAGACGTTTAAACACTCAGTGCCTCGATTCTTCGTGC 3900 | |||||||| ||||| || |||||||| | |||||| || ||||| || ||||| || | Sbjct 342 GCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTC 283 Query 3901 CGGAGCATGGTGTCATGATGACTTTGATGCTGGTTCGCTTCCCGCCTATCAGTCCTTTGG 3960 | |||||||| ||| | ||| | ||| ||||| || ||||||| || | Sbjct 282 CTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAAG 223 Query 3961 AGCATCATTATCTTGTTGGTCGTAATAATTTGACTTATACCGACCTTGCGGGTGACCCGG 4020 || ||| || ||| | | | ||||||||||||||| |||| || ||||| | Sbjct 222 AGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTG 163 Query 4021 CTTTGATTGGTAATTTGCCGCCACGTGAGATTTCTTATCAGGATCTTTTCCGTGATGGTC 4080 |||| ||| | |||||||| ||||| |||||| ||||| |||||||| |||| Sbjct 162 TTTTGTATGGCGACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTG 103 Query 4081 GTCCGGGCATTAAGATTAAGGTTGCCGAGTCTATCTGGTATCGT 4124 | || | ||| ||||| |||| ||| | ||||||||| Sbjct 102 ATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19366215466208