Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_004289.1 Length=5380 Score E Sequences producing significant alignments: (Bits) Value seq4407855 120 1e-23 >seq4407855 Length=550 Score = 120 bits (132), Expect = 1e-23 Identities = 277/414 (67%), Gaps = 10/414 (2%) Strand=Plus/Minus Query 2893 AAATCATACATAGCTAATGGATATGGTTTTTTATTACTAGCGGCTAATAATGGTGCAGTA 2952 |||||| ||| |||||| |||||||| || |||| |||||| |||| | Sbjct 409 AAATCAAACAAAGCTAAAGGATATGGCTTAAGCATACTGTTGGCTAAATATGGAAATGGT 350 Query 2953 TTCCAACGAATAGTTTTTAAACGTACATCTTTAAAGTGCGGATC-CCAACATATATCTAA 3011 ||||| ||||| | | | | ||||| | |||| || |||| || | | | | || Sbjct 349 TTCCACTGAATACTAGTAAGTCTTACATTTATAAAATGGCGATCACCGATAAGTTCCAAA 290 Query 3012 --TTCATTATTACTGATTAAAAGAA--CAGGCGTCTTAGTAAATATACAATCAGCTTTAA 3067 | |||| ||| |||| | |||| || | ||| || || ||||| ||| Sbjct 289 GGTCCATTG-----GATATAAAGCATACAGGTGTTCTGGTATATGTAGCATCAGGATTAT 235 Query 3068 ATTTAACACGAACGTTAAAAGCGGTTCCTTCGCATAATTTTTTAAAATCTTCTTTCGCTC 3127 |||||||||||| |||||||| | | ||| || | ||| ||||| || || || ||| Sbjct 234 GTTTAACACGAACATTAAAAGCAGCACTTTCACACAGTTTCTTAAAGTCCTCCTTAGCTG 175 Query 3128 CTTCTTCCATACTAATTTCATTACCAACAACTATACGTCGATTAACTACGTCTTGCAATG 3187 |||||| || | |||||| | | || || | ||||||| || ||||| || | Sbjct 174 AGTCTTCCGTAGATAGTTCATTCGCCATAATTAATCTTCGATTAGAGACTTCTTGTAAAG 115 Query 3188 CAAAATTATTTGTTTTATTATTAACTCGACCTATATGACCTACATTATTTGCTAAAGCGA 3247 ||| ||||||||| || ||||| ||||| || |||||||||| |||| || Sbjct 114 AAAATGGATTTGTTTTGTTGCAAACTCTGCCTATGTGGCCTACATTATGAGCTATTGCAG 55 Query 3248 TAATTGCGTCGAAAAAATAATTTTTCCCAGAATTCGGCGGACCAATAACACACA 3301 | ||| ||||||||||||| || || || || |||||| || ||||| Sbjct 54 CTACACAGTCCCAAAAATAATTTTTTCCGGAGTTTGGAGGACCATGAATACACA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16171136481875