Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_004285.1 Length=4176 Score E Sequences producing significant alignments: (Bits) Value seq3372 185 2e-43 >seq3372 Length=711744 Score = 185 bits (204), Expect = 2e-43 Identities = 227/306 (74%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 2013 AAATCAACGGCATGGTACTAGAAGGTATAACAAACGCAGGTAAATCGCTAATATTAGACA 2072 ||||| |||| ||||||| || || |||||||| ||||||||| | ||| | ||| Sbjct 260621 AAATCGACGGACTGGTACTGGAGGGACCGACAAACGCGGGTAAATCGATGATAATCGACT 260562 Query 2073 ACTTATT---AGCAATGGTTAAACCGGAAGAAATACCAAGAGAAAGAGACAACAGCGGAT 2129 | | | || || |||||||| || | ||| |||||||||||||||| ||||| Sbjct 260561 GCACGGTGAGACCACTG---AAACCGGAGGAGACACCGAGAGAAAGAGACAACAACGGAT 260505 Query 2130 TCCACTTGGATCAACTACCAGGAGCAG-GATCAGTACTATTTGAAGAACCGATGATTACA 2188 | || ||||||||||| ||| || | || | || |||| || |||||||| || || Sbjct 260504 TTCATTTGGATCAACTTCCATTCGCGGCGAGC-GTGATATTCGAGGAACCGATAATAACG 260446 Query 2189 CCAGTAAACGTAGGAACATGGAAATTATTATTGGAAGGAAAAACAATCAAAACGGACGTA 2248 ||| |||||||||||||||||||| ||||||||||||| ||||||| |||||| || | Sbjct 260445 CCAATAAACGTAGGAACATGGAAACTATTATTGGAAGGCAAAACAACCAAAACCGATCAA 260386 Query 2249 AAAAACAAAGACAAGGAACCCATAGAGAGAACACCAACTTGGATCACCACAGCTACACCA 2308 ||| ||| |||||| ||| | || | | ||| | | || || || ||||||||| Sbjct 260385 AAATACAGAGACAAAGAAGCGATCACGCGGTTACCGATATACATGACAACGGCTACACCA 260326 Query 2309 ATAACA 2314 || ||| Sbjct 260325 ATCACA 260320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13250571127035