Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_011317.1 Length=4139 Score E Sequences producing significant alignments: (Bits) Value seq3372 114 3e-22 >seq3372 Length=711744 Score = 114 bits (126), Expect = 3e-22 Identities = 193/277 (70%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 2139 AAACCAGAAGAAATACCACGAGAACGAGACAACAGTGGATTCCACCTTGACCAAGTACCA 2198 ||||| || || | ||| ||||| ||||||||| ||||| || | || ||| | ||| Sbjct 260544 AAACCGGAGGAGACACCGAGAGAAAGAGACAACAACGGATTTCATTTGGATCAACTTCCA 260485 Query 2199 GGAGCAG-GATCGATCCTATTTGAAGAACCAATGATCACACCAGTAAACGTCGGAACATG 2257 || | || || | |||| || ||||| || || || ||| ||||||| |||||||| Sbjct 260484 TTCGCGGCGAGCG-TGATATTCGAGGAACCGATAATAACGCCAATAAACGTAGGAACATG 260426 Query 2258 GAAATTATTACTAGAAGGAAAAACCATAAAAACAGATGTGAAAAATAAAGACAAAGAGCC 2317 |||| ||||| | ||||| ||||| | ||||| ||| ||| | | ||||||||| | Sbjct 260425 GAAACTATTATTGGAAGGCAAAACAACCAAAACCGATCAAAAATACAGAGACAAAGAAGC 260366 Query 2318 GATAGAACGCACACCAACGTGGATCACAACAGCAACTCCAATTACAAATAACATTGATAT 2377 ||| || ||| | | || ||||| || || ||||| ||| ||||| || Sbjct 260365 GATCACGCGGTTACCGATATACATGACAACGGCTACACCAATCACAGCAAACATAGACTG 260306 Query 2378 GAATGAGACATCACAAATACTACAAAGAATAAAATTA 2414 || ||||| ||| ||| || ||||||||| || Sbjct 260305 CAAAGAGACGGAACAGATAAATCAGAGAATAAAAATA 260269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13132176746040