Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_012636.1 Length=3776 Score E Sequences producing significant alignments: (Bits) Value seq3372 114 3e-22 >seq3372 Length=711744 Score = 114 bits (126), Expect = 3e-22 Identities = 242/357 (68%), Gaps = 8/357 (2%) Strand=Plus/Minus Query 1975 AAATAAATGGAATGGTACTAGAGGGGATCACAAATGCAGGAAAATCACTAATATTGGAC- 2033 |||| | ||| ||||||| ||||| ||||| || || ||||| | ||| | ||| Sbjct 260621 AAATCGACGGACTGGTACTGGAGGGACCGACAAACGCGGGTAAATCGATGATAATCGACT 260562 Query 2034 --AATTTATTAGCAATGGTAAAACCAGAAGAAATACCACGAGAAAGAGACAACAGTGGAT 2091 | | | || || ||||| || || | ||| ||||||||||||||| |||| Sbjct 260561 GCACGGTGAGACCACTG---AAACCGGAGGAGACACCGAGAGAAAGAGACAACAACGGAT 260505 Query 2092 TCCACCTTGATCAAGTACCAGGAGCAG-GATCAATCCTATTTGAAGAACCAATGATCACA 2150 | || | |||||| | ||| || | || | | |||| || ||||| || || || Sbjct 260504 TTCATTTGGATCAACTTCCATTCGCGGCGAGCG-TGATATTCGAGGAACCGATAATAACG 260446 Query 2151 CCAGTAAACGTCGGAACATGGAAATTATTACTAGAAGGAAAAACCATAAAAACGGATGTG 2210 ||| ||||||| |||||||||||| ||||| | ||||| ||||| | ||||| ||| Sbjct 260445 CCAATAAACGTAGGAACATGGAAACTATTATTGGAAGGCAAAACAACCAAAACCGATCAA 260386 Query 2211 AAAAATAAAGACAAAGAGCCGATAGAACGCACACCAACGTGGATCACTACAGCAACTCCA 2270 ||| | | ||||||||| |||| || ||| | | || || || || || ||| Sbjct 260385 AAATACAGAGACAAAGAAGCGATCACGCGGTTACCGATATACATGACAACGGCTACACCA 260326 Query 2271 ATTACAAATAACATTGATATGAATGAGACGTCACAAATACTACAAAGAATTAAACTA 2327 || ||| ||||| || || |||||| ||| ||| || ||||| ||| || Sbjct 260325 ATCACAGCAAACATAGACTGCAAAGAGACGGAACAGATAAATCAGAGAATAAAAATA 260269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11970631873035