Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acromyrmex_20echinatior_20[refseq_20GCF_5F000204515.1_202011-05-03] 4,339 sequences; 295,944,863 total letters Query= NC_015115.1 Length=3893 Score E Sequences producing significant alignments: (Bits) Value seq3372 152 1e-33 >seq3372 Length=711744 Score = 152 bits (168), Expect = 1e-33 Identities = 250/356 (70%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 1984 AAATAAATGGAATGGTACTAGAGGGAATAACAAATGCAGGAAAATCACTAATATTGGACA 2043 |||| | ||| ||||||| |||||| ||||| || || ||||| | ||| | ||| Sbjct 260621 AAATCGACGGACTGGTACTGGAGGGACCGACAAACGCGGGTAAATCGATGATAATCGACT 260562 Query 2044 ACTTATTGG--CCATGGTAAAACCAGAAGAGATACCACGAGAAAGAGACAACAGCGGATT 2101 | || ||| | ||||| || |||| ||| ||||||||||||||| |||||| Sbjct 260561 GCACGGTGAGACCACTG--AAACCGGAGGAGACACCGAGAGAAAGAGACAACAACGGATT 260504 Query 2102 CCACCTTGACCAAGTACCAGGAGCAG-GATCAATCCTATTCGAAGAACCAATGATAACAC 2160 || | || ||| | ||| || | || | | ||||||| ||||| || ||||| | Sbjct 260503 TCATTTGGATCAACTTCCATTCGCGGCGAGCG-TGATATTCGAGGAACCGATAATAACGC 260445 Query 2161 CAGTAAACGTCGGAACATGGAAATTATTACTGGAAGGaaaaaccataaaaacggatgtaa 2220 || ||||||| |||||||||||| ||||| ||||||| ||||| | ||||| ||| || Sbjct 260444 CAATAAACGTAGGAACATGGAAACTATTATTGGAAGGCAAAACAACCAAAACCGATCAAA 260385 Query 2221 aaaataaaGACAAAGAGCCGATAGAGCGAACACCAACGTGGATCACTACAGCAACTCCAA 2280 || | | ||||||||| |||| ||| ||| | | || || || || || |||| Sbjct 260384 AATACAGAGACAAAGAAGCGATCACGCGGTTACCGATATACATGACAACGGCTACACCAA 260325 Query 2281 TAACAAATAACATTGATATGAATGAGACGTCACAAATACTACAAAGAATAAAACTA 2336 | ||| ||||| || || |||||| ||| ||| || ||||||||| || Sbjct 260324 TCACAGCAAACATAGACTGCAAAGAGACGGAACAGATAAATCAGAGAATAAAAATA 260269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12345014104830