Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24] 23,925 sequences; 541,692,442 total letters Query= NC_005040.1 Length=5499 Score E Sequences producing significant alignments: (Bits) Value seq20 244 4e-61 seq43 127 7e-26 seq133 120 1e-23 seq893 118 4e-23 seq317 116 1e-22 seq1343 113 2e-21 seq9810 107 7e-20 seq1409 96.9 1e-16 seq1324 93.3 1e-15 seq1816 91.5 5e-15 seq802 91.5 5e-15 seq97 91.5 5e-15 seq1008 89.7 2e-14 >seq20 Length=1368841 Score = 244 bits (270), Expect = 4e-61 Identities = 265/347 (76%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 2166 TTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGT 2225 ||||| |||| | |||||||| ||||||||| | |||||||||||||| ||||| Sbjct 1059210 TTTTTGCTAACATTGTATAATGTGTTAGACAAAAAAATTCCGAAATTAAATTCATTATGT 1059151 Query 2226 ATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTG 2285 || | | | || ||||| ||||| |||||||||| | |||| |||||||| ||||| Sbjct 1059150 ATTTACATTGAGCCATCGGCGGGTAAAAACTTTTTTT-CAATGCAGTTGCATCATATTT- 1059093 Query 2286 CTTTCA--TATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACG 2343 ||| | || ||||||||||||||||| || ||||| ||||||||| | |||||||||| Sbjct 1059092 -TTTAAATTACGGTATGTTCGGTACAGCAAACAAAAATAATAATTTTACTTGGGCAGACG 1059034 Query 2344 GAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAAA 2403 | ||||| ||| |||||||| ||||||| ||||| || ||||||||| | ||||| | || Sbjct 1059033 GTGCGGGAAAAAGATTAGTTATATGGAATGAACCGAATTATGAACAACATCATATTG-AA 1058975 Query 2404 AAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACG 2463 |||| |||||| | || || || |||||||| | | || ||||||||| |||||| Sbjct 1058974 AAATGAAAGAATTATTAGGTGGTGATACAACTCGGGTTCACGTAAAATATAAAAACGATC 1058915 Query 2464 TTAGTGTGCAAAGGGTACCCATTATTATATTAACAAATAACCACTTG 2510 | ||| | ||| ||||| ||||||| ||||| ||||| Sbjct 1058914 AACCATTACAAGGACCACCTATTATATTATTAACTAATAATTACTTG 1058868 Score = 78.8 bits (86), Expect = 3e-11 Identities = 96/131 (73%), Gaps = 5/131 (4%) Strand=Plus/Minus Query 4321 AACACTTTCCAACCACATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTA 4380 ||||||| |||| | | ||||| || | | ||| ||||| | ||||||| ||| Sbjct 1019873 AACACTTGCCAAAC-----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTA 1019819 Query 4381 TATCCTCCCGTGTGACCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCA 4440 |||||| | | | |||||||||||||| ||||| |||||| |||||||| ||| Sbjct 1019818 TATCCTGTTGACTTATGAATTGGCCTAGGTATGACAGCATTTTCAAGACTAGGATTCCCA 1019759 Query 4441 GTATCTGGGTC 4451 |||||||| || Sbjct 1019758 GTATCTGGATC 1019748 >seq43 Length=922428 Score = 127 bits (140), Expect = 7e-26 Identities = 211/303 (70%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 2165 ATTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATG 2224 |||||| ||| ||| ||| | | || |||| | |||||||| |||||| || Sbjct 189787 ATTTTTGCAAACTCTAGTCAATATATTGGATAAAAAAATTCCGAAAAGAAATAGCATGCT 189846 Query 2225 TATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTT 2284 ||| | |||||| || || || || | ||||||||||||||| || | | ||| Sbjct 189847 AATACATTCTCCCCCCAGCGCGGGCAAAAATTATTTTTTCGATGCCGTGGCCGCCTTTTT 189906 Query 2285 GCTTTCA--TATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGAC 2342 ||| | || ||||||||||| || ||||| |||| |||||||| | | || Sbjct 189907 --TTTGAATTACGGTATGTTCGGAACTGCCAACAAAACGAATAATTTCAGTTTCTCCGAT 189964 Query 2343 GGAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAA 2402 || || || ||||| | || | ||||||||||| || || || || ||| | ||| Sbjct 189965 GGTGCCGGCAAACGTCTCGTCATTTGGAACGAACCTAATTACGAGGTGTATCATTTGGAA 190024 Query 2403 AAAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGAC 2462 ||||| || ||||| || || || ||||| || ||| ||||||| ||||| |||||| Sbjct 190025 AAAATGAAGGAACTATTAGGAGGGGATACCACTAGAGTACATGTCAAATACAAAAACGAT 190084 Query 2463 GTT 2465 ||| Sbjct 190085 GTT 190087 >seq133 Length=817148 Score = 120 bits (132), Expect = 1e-23 Identities = 208/301 (69%), Gaps = 1/301 (0%) Strand=Plus/Minus Query 2165 ATTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATG 2224 |||||| ||| ||| ||| | | || |||| | |||| ||| |||||| ||| Sbjct 230835 ATTTTTGCAAACTCTAGTCAATATATTGGATAAAAAAATTCCAAAAAGAAATAGCATACT 230776 Query 2225 TATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTT 2284 ||| | ||| || || || || || | ||||||||| ||||| || | | ||| Sbjct 230775 AATACATTCTCCTCCGAGCGCGGGCAAAAATTATTTTTTCGACGCCGTAGCCGCCTTTTT 230716 Query 2285 GCTTTCAT-ATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACG 2343 || || | ||||||||||| || ||||| |||| ||||||||| | | || | Sbjct 230715 TTTTGAATTACGGTATGTTCGGAACTGCCAACAAAACGAATAATTTTAGTTTTTCCGATG 230656 Query 2344 GAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAAA 2403 | || || ||||| | || ||||||||||||| || || || || ||| | |||| Sbjct 230655 GCGCCGGCAAACGTCTCGTCATATGGAACGAACCCAATTACGAGGTGTATCATTTGGAAA 230596 Query 2404 AAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACG 2463 |||| || || || || || || ||||| || ||| | ||||| |||||| |||||| | Sbjct 230595 AAATGAAGGAGCTATTAGGAGGGGATACCACCAGAGTGCATGTTAAATATAAAAACGATG 230536 Query 2464 T 2464 | Sbjct 230535 T 230535 >seq893 Length=162389 Score = 118 bits (130), Expect = 4e-23 Identities = 253/374 (68%), Gaps = 27/374 (7%) Strand=Plus/Plus Query 4096 ATAAATTTGTTCTGATTTAATGTGGCCAGGGAGCTCGTAGAGCTATTGGTTTCAAAAGCT 4155 ||||||||||| ||||||||||| |||| || || || ||| ||||||||||| Sbjct 95377 ATAAATTTGTTTTGATTTAATGTTGCCAAATTACTGGTTGATGCATTAGTTTCAAAAGCA 95436 Query 4156 GTGCGAGGATTACGCATGACACCCTTGCATTTGA-CTTCAGTGCATATAGCACCTCTGGG 4214 || |||||||||||||| || | |||||||| | || || | | || ||| | | Sbjct 95437 GTACGAGGATTACGCATTACTACTTTGCATTTCACCTCCAACACTTTTA----CTCCGCG 95492 Query 4215 T--------AAAAAT----TTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCAC 4262 | || ||| ||||| || || || |||||||| || |||||| ||| || Sbjct 95493 TATTTTACAAACAATATTATTAAATTCTGAAGGAGACATATAAAAATAAGGTTTGTCTAC 95552 Query 4263 GGGCACACTCATTAAACTCGTTGTCCCAAGATAGGCGTTATC---AGTGTTAAGAT--AT 4317 || | ||||||| ||||| || | | || || | ||| ||| | | Sbjct 95553 AGGTAAGTACATTAAAGATGTTGTTCCCAAACGTTCGCTAGCAAAAGTTCCAAGTTGGAG 95612 Query 4318 CGCAACACTTTCCAACCACATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATA 4377 | || |||| ||| || || ||||| || | | ||| ||||| | ||||| Sbjct 95613 CTGAATACTTGCCA--CA---CCATAACTAATTATTGAATGGTTTTTTCTAAACACCATT 95667 Query 4378 GTATATCCTCCCGTGTGACCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTG 4437 ||||||||| | | | |||||||||||||| ||| | ||||||| ||||||||| Sbjct 95668 GTATATCCTGTTGACTTATGAATTGGCCTAGGTATGACAACATTTTCAGTGCTAGGATTC 95727 Query 4438 CCAGTATCTGGGTC 4451 ||||||||||| || Sbjct 95728 CCAGTATCTGGATC 95741 >seq317 Length=235664 Score = 116 bits (128), Expect = 1e-22 Identities = 208/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 2165 ATTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATG 2224 |||||| ||| ||| ||| | | || |||| | |||| ||| |||||| ||| Sbjct 118598 ATTTTTGCAAACTCTAGTCAATATATTGGATAAAAAAATTCCAAAAAGAAATAGCATACT 118657 Query 2225 TATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTT 2284 ||| | ||| || || || || || | ||||||||| ||||| || | | ||| Sbjct 118658 AATACATTCTCCTCCGAGCGCGGGCAAAAATTATTTTTTCGACGCCGTAGCCGCCTTTTT 118717 Query 2285 GCTTTCA--TATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGAC 2342 ||| | || ||||||||||| || ||||| |||| ||||||||| | | || Sbjct 118718 --TTTGAATTACGGTATGTTCGGAACTGCCAACAAAACGAATAATTTTAGTTTTTCCGAT 118775 Query 2343 GGAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAA 2402 || | || ||||| | || ||||||||||||| || || || || ||| | ||| Sbjct 118776 GGTACCGGCAAACGTCTCGTCATATGGAACGAACCCAATTACGAGGTGTATCATTTGGAA 118835 Query 2403 AAAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGAC 2462 ||||| || || || || || || ||||| || ||| | ||||| |||||| |||||| Sbjct 118836 AAAATGAAGGAGCTATTAGGAGGGGATACCACCAGAGTGCATGTTAAATATAAAAACGAT 118895 Query 2463 GT 2464 || Sbjct 118896 GT 118897 >seq1343 Length=17696 Score = 113 bits (124), Expect = 2e-21 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 2256 ttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGTTCGGTACAGCCA 2313 ||| ||||||| ||||| || | | ||| ||| | || ||||||||||| || |||| Sbjct 15594 TTTATTTTCGACGCCGTAGCCGCCTTTTTTTTTTGAATTACGGTATGTTCGGAACTGCCA 15535 Query 2314 ATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCTATGGAACG 2373 | |||| |||| |||| | | || || || || ||||| | || ||||||||| Sbjct 15534 ACAAAACGAATATTTTTAGTTTTTCCGATGGCGCCGGCAAACGTCTCGTCATATGGAACG 15475 Query 2374 AACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGGAGATACAA 2433 |||| || || || ||| ||| | |||||||| || || || || || || ||||| | Sbjct 15474 AACCCAATTACGAGGTATATCATTTGGAAAAAATGAAGGAGCTATTAGGAGGGGATACCA 15415 Query 2434 CAAGAATACATGTAAAATATGCAAACGACGT 2464 | ||| | ||||| |||||| |||||| || Sbjct 15414 CCAGAGTGCATGTTAAATATAAAAACGATGT 15384 >seq9810 Length=816 Score = 107 bits (118), Expect = 7e-20 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 2256 ttttttttCGATGCCGTTGCATCGTATTTGCTTTCAT-ATGGTATGTTCGGTACAGCCAA 2314 ||||||||||| ||||| || | | ||| ||| || | ||||||||||| || ||||| Sbjct 1 TTTTTTTTCGACGCCGTAGCCGCCTTTTT--TTTAATTACGGTATGTTCGGAACTGCCAA 58 Query 2315 TAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCTATGGAACGA 2374 |||| ||||||||| | | || || || || ||| | || |||||||||| Sbjct 59 CAAAACGAATAATTTTAGTTTTTCCGATGGCGCCGGCAAATTTCTCGTCATATGGAACGA 118 Query 2375 ACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGGAGATACAAC 2434 ||| || || || || ||| | |||||||| || || || || || || ||||| || Sbjct 119 ACCCAATTACGAGGTGTATCATTTGGAAAAAATGAAGGAGCTATTAGGAGGGGATACCAC 178 Query 2435 AAGAATACATGTAAAATATGCAAACGACGT 2464 ||| | ||||| |||||| |||||| || Sbjct 179 TAGAGTGCATGTTAAATATAAAAACGATGT 208 >seq1409 Length=15286 Score = 96.9 bits (106), Expect = 1e-16 Identities = 165/236 (70%), Gaps = 10/236 (4%) Strand=Plus/Minus Query 4221 TTTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCACGGGCACACTCATTAAACT 4280 |||||| || || || ||||||||||| | |||| ||| ||||| | | ||||||| Sbjct 7536 TTTAAATTCTGATGGAGACATATAGAAATATGGTTTGTCTACGGGTAGATACATTAAAGA 7477 Query 4281 CGTTGTCCCAAGATAGGCGTTATCAG-TGTTA-AGAT---ATCGCAACACTTTCCAACCA 4335 ||||| || | | || || || |||| | || | | ||||||| |||| | Sbjct 7476 GGTTGTTCCCAAACGTTCGCTAGCAAATGTTCCAAATTGGAGCTGAACACTTGCCAAAC- 7418 Query 4336 CATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTATATCCTCCCGTGTGA 4395 | ||||| || | | ||| ||||| | ||||||| ||||||||| | | | Sbjct 7417 ----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTATATCCTGTTGACTTA 7362 Query 4396 CCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCAGTATCTGGGTC 4451 |||||||||||||| ||||| |||||| |||||||| ||||||||||| || Sbjct 7361 TGAATTGGCCTAGGTATGACAGCATTTTCAAGACTAGGATTCCCAGTATCTGGATC 7306 Score = 95.1 bits (104), Expect = 4e-16 Identities = 245/368 (67%), Gaps = 19/368 (5%) Strand=Plus/Minus Query 4098 AAATTTGTTCTGATTTAATGTGGCCAGGGAGCTCGTAGAGCTATTGGTTTCAAAAGCTGT 4157 |||||| || || ||||| || || | |||||||| ||| |||||||| || || Sbjct 14764 AAATTTATTTTGGTTTAAAGTAGCTAAATTACTCGTAGACGCATTTGTTTCAAATGCAGT 14705 Query 4158 GCGAGGATTACGCATGACACCCTTGCATTTGACTT-CAGTGCATATAG--CACCTCTGGG 4214 || ||||| | ||| || | || ||| |||| || | | | || ||| | | | Sbjct 14704 ACGTGGATTTCTCATTACTACTTTACATGAAACTTGCAATACCTTTACGCCACGTATATG 14645 Query 4215 TAAAAA------TTTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCACGGGCAC 4268 | | | |||||| || || || ||||||||||| | |||| || ||||| | Sbjct 14644 TGATACAATATTTTTAAATTCTGATGGAGACATATAGAAATATGGTTTATCTACGGGTAG 14585 Query 4269 ACTCATTAAACTCGTTGTCCCAAGATAGGCGTTATCAG-TGTTA-AGAT---ATCGCAAC 4323 ||||||| ||||| || | | || || || |||| | || | | ||| Sbjct 14584 GTACATTAAAGAGGTTGTTCCCAAACGTTCGCTAGCAAATGTTCCAAATTGGAGCTGAAC 14525 Query 4324 ACTTTCCAACCACATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTATAT 4383 |||| |||| | | ||||| || | | ||| ||||| | ||||||| |||||| Sbjct 14524 ACTTGCCAAAC-----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTATAT 14470 Query 4384 CCTCCCGTGTGACCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCAGTA 4443 ||| | | | |||||||||||||| ||||| |||||| |||||||| |||||| Sbjct 14469 CCTGTTGACTTATGAATTGGCCTAGGTATGACAGCATTTTCAAGACTAGGATTCCCAGTA 14410 Query 4444 TCTGGGTC 4451 ||||| || Sbjct 14409 TCTGGATC 14402 Score = 80.6 bits (88), Expect = 9e-12 Identities = 179/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGT 2301 |||||||| || |||||||| || || || || |||| ||| ||| | || || | Sbjct 9299 GCAGGTAAAAATTTTTTTTTTGACGCTGTAGCTTCGTTTTT--TTTAAATTACGGGTGTT 9242 Query 2302 TCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAG 2361 | ||||| || ||||||| |||||||| ||| || | ||| || ||||| | | Sbjct 9241 TGGGTACTGCTAATAAAACGAATAATTTCGCGTTTATGGAAGCAGCAGGCAAACGCCTCG 9182 Query 2362 TTCTATGGAACGAACCAAACTATGAA--CAATACCATATAGAAAAAATAAAAGAACTTTT 2419 | || ||||| ||||||||||||||| |||| || | | || | |||| | | || Sbjct 9181 TACTTTGGAATGAACCAAACTATGAAAGCAAT--CACGTGAACGAATTGAAAGCATTATT 9124 Query 2420 GGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACGTTAGTGTGCAAAGGGT 2479 || |||||| | ||| | || || |||||| || || | ||| | Sbjct 9123 AGGTGGAGATTCTTGCAGAGTTCAAGTTAAATATAAAAGTGATCAACCACTTCAAGGTCC 9064 Query 2480 ACCCATTATTATATTAACAAATAAC 2504 ||| |||||||||||||| ||| || Sbjct 9063 ACCAATTATTATATTAACTAATGAC 9039 >seq1324 Length=37283 Score = 93.3 bits (102), Expect = 1e-15 Identities = 190/280 (68%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 2109 ATAGCAAAAGAATTACTCAACTATCAATTTGGCGATGACCCTGAAG-TAGTAATTGAATT 2167 || || || |||||||| ||||||||| | || | | ||| || | ||| | || Sbjct 12611 ATTGCTAATGAATTACTTTTACATCAATTTGACAATAATACCGAAAATATTTATT-ATTT 12669 Query 2168 TTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTAT 2227 ||||||| || ||| | ||||| |||||| |||| |||| ||| || || Sbjct 12670 TTTAACAGATTTAATAAATATAATAGATAAAAGAATTCCTAAATGTAATTCATTAGCAAT 12729 Query 2228 AAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCT 2287 | | ||| ||| ||||| | || | |||||| ||||| ||||| || | ||| | Sbjct 12730 ATTAGCTCCACCTCATGCAGGCGAAAATTATTTTTTTGATGCGGTTGCTTCCTTTTTCAT 12789 Query 2288 TTCATATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGC 2347 || ||| | || ||||| || || |||| ||||||||| | | || | ||| Sbjct 12790 AAATTACGGTGTTTTGGGTACTGCTAACAAAACAAATAATTTTGCATTTATGGAAGCAGC 12849 Query 2348 GGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAA 2387 || ||||| |||||||||||||| ||||| || || ||| Sbjct 12850 AGGCAAACGTTTAGTTCTATGGAATGAACCTAATTACGAA 12889 Score = 84.2 bits (92), Expect = 8e-13 Identities = 170/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 2184 AATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTATAAAAAGTCCCCCTTCG 2243 ||||| || || ||| | |||||||||| || | || ||| | || ||| Sbjct 29404 AATGTTATTGATAAACGTGTTCCGAAATGCAACACATTAGCAATACTAGCACCACCTAAC 29463 Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCATATGGTATGT-T 2302 ||||| || || | |||||| ||||| ||||| || | ||| | |||||| ||| | Sbjct 29464 GCAGGGAAAAATTATTTTTT-GATGCTGTTGCTTCTTTTTTA-TAAATTATGGT-TGTCT 29520 Query 2303 CGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGT 2362 || ||||| ||||||| ||||| || | | || | ||| |||||| | ||||| Sbjct 29521 TGGAACAGCGAATAAAACTAATAACTTCGCTTTTATGGAAGCAGCAGGTAAAAGGTTAGT 29580 Query 2363 TCTATGGAACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGG 2422 ||||||||| |||||||| |||||| | | ||| | | || | |||| ||| || || Sbjct 29581 TCTATGGAATGAACCAAATTATGAAGCAAATCATGTTAACGAACTCAAAGCACTGTTAGG 29640 Query 2423 GGGAGAT 2429 || ||| Sbjct 29641 TGGTGAT 29647 >seq1816 Length=21341 Score = 91.5 bits (100), Expect = 5e-15 Identities = 170/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 2184 AATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTATAAAAAGTCCCCCTTCG 2243 ||||| || || ||| | |||||||||| || | || ||| | || ||| Sbjct 3122 AATGTTATTGATAAACGTGTTCCGAAATGCAACACATTAGCAATACTAGCACCACCTAAC 3063 Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCATATGGTATGT-T 2302 ||||| || || | |||||| ||||| ||||| || | ||| | |||||| ||| | Sbjct 3062 GCAGGGAAAAATTATTTTTTTGATGCTGTTGCTTCTTTTTTTATAAATTATGGT-TGTCT 3004 Query 2303 CGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGT 2362 || ||||| ||||||| ||||| || | | || | ||| |||||| | ||||| Sbjct 3003 TGGAACAGCGAATAAAACTAATAACTTCGCTTTTATGGAAGCAGCAGGTAAAAGGTTAGT 2944 Query 2363 TCTATGGAACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGG 2422 ||||||||| |||||||| |||||| | | ||| | | || | |||| ||| || || Sbjct 2943 TCTATGGAATGAACCAAATTATGAAGCAAATCATGTTAACGAACTCAAAGCACTGTTAGG 2884 Query 2423 GGGAGAT 2429 || ||| Sbjct 2883 TGGTGAT 2877 >seq802 Length=76345 Score = 91.5 bits (100), Expect = 5e-15 Identities = 165/237 (70%), Gaps = 11/237 (5%) Strand=Plus/Plus Query 4221 TTTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCACGGGCACACTCATTAAACT 4280 |||||| || || || ||||||||||| | |||| ||| ||||| | | ||||||| Sbjct 22933 TTTAAATTCTGATGGAGACATATAGAAATATGGTTTGTCTACGGGTAGATACATTAAAGA 22992 Query 4281 CGTTGTCCCAAGATAGGCGTTATCAG-TGTTA-AGAT---ATCGCAACACTTTCCAACCA 4335 ||||| || | | || || || |||| | || | | ||||||| |||| | Sbjct 22993 GGTTGTTCCCAAACGTTCGCTAGCAAATGTTCCAAATTGGAGCTGAACACTTGCCAAAC- 23051 Query 4336 CATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTATATCCTCCCGTGTGA 4395 | ||||| || | | ||| ||||| | ||||||| ||||||||| | | | Sbjct 23052 ----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTATATCCTGTTGACTTA 23107 Query 4396 CCGATTGGCC-TAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCAGTATCTGGGTC 4451 ||||||| ||||||| ||||| |||||| |||||||| ||||||||||| || Sbjct 23108 TGAATTGGCCATAGGTATGACAGCATTTTCAAGACTAGGATTCCCAGTATCTGGATC 23164 Score = 80.6 bits (88), Expect = 9e-12 Identities = 104/144 (72%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCATATGGTATGTTC 2303 || || || || | |||||| ||||| || || || | ||| | |||||| || Sbjct 8273 GCTGGCAAAAATTATTTTTTTGATGCTGTAGCGTCATTTTTCATAAACTATGGTTGTTTA 8332 Query 2304 GGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTT 2363 || |||||||| |||| ||||||||| ||| || | ||| |||||| | ||||| Sbjct 8333 GGAACAGCCAACAAAACTAATAATTTTGCGTTCATGGAAGCAGCTGGTAAAAGGCTAGTT 8392 Query 2364 CTATGGAACGAACCAAACTATGAA 2387 || ||||||||||| ||||| ||| Sbjct 8393 CTTTGGAACGAACCTAACTACGAA 8416 Score = 80.6 bits (88), Expect = 9e-12 Identities = 179/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGT 2301 |||||||| || |||||||| || || || || |||| ||| ||| | || || | Sbjct 21174 GCAGGTAAAAATTTTTTTTTTGACGCTGTAGCTTCGTTTTT--TTTAAATTACGGGTGTT 21231 Query 2302 TCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAG 2361 | ||||| || ||||||| |||||||| ||| || | ||| || ||||| | | Sbjct 21232 TGGGTACTGCTAATAAAACGAATAATTTCGCGTTTATGGAAGCAGCAGGCAAACGCCTCG 21291 Query 2362 TTCTATGGAACGAACCAAACTATGAA--CAATACCATATAGAAAAAATAAAAGAACTTTT 2419 | || ||||| ||||||||||||||| |||| || | | || | |||| | | || Sbjct 21292 TACTTTGGAATGAACCAAACTATGAAAGCAAT--CACGTGAACGAATTGAAAGCATTATT 21349 Query 2420 GGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACGTTAGTGTGCAAAGGGT 2479 || |||||| | ||| | || || |||||| || || | ||| | Sbjct 21350 AGGTGGAGATTCTTGCAGAGTTCAAGTTAAATATAAAAGTGATCAACCACTTCAAGGTCC 21409 Query 2480 ACCCATTATTATATTAACAAATAAC 2504 ||| |||||||||||||| ||| || Sbjct 21410 ACCAATTATTATATTAACTAATGAC 21434 >seq97 Length=644085 Score = 91.5 bits (100), Expect = 5e-15 Identities = 184/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 2193 GACAAAAGAGTTCCGAAATTAAATAGTATATGTATAAAAAGTCCCCCTTCGGCAGGTAAG 2252 || |||| | |||| ||| || ||| || | ||| | ||| || || || || Sbjct 584417 GATAAAAAAATTCCAAAAAGAAGTAGCATGTTAATACATTCTCCTCCGAGCGCGGGCAAA 584476 Query 2253 AACttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGTTCGGTACAG 2310 || | ||||||| | ||||| || | | ||| ||| | || || |||||||| || | Sbjct 584477 AAATATTTTTTCAACGCCGTAGCCGCCTTTTT--TTTAAATTACGGAATGTTCGGCACTG 584534 Query 2311 CCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCTATGGA 2370 |||| |||| |||||||| | || || || || ||| | | || |||||| Sbjct 584535 CCAACAAAACGAATAATTTAATTTTTTTCGATGGCGCTGGCAAATGTCTCGTCATATGGA 584594 Query 2371 ACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGGAGATA 2430 ||||||| || || || ||| ||| | |||||||| || || || || || | |||| Sbjct 584595 ACGAACCCAATTACGAGGTATATCATTTGGAAAAAATTAAGGAGCTATTAGGATGGGATA 584654 Query 2431 CAACAAGAATACATGTAAAATATGCAAACGA 2461 | || ||| | ||||| |||||| |||||| Sbjct 584655 CCACCAGAGTGCATGTTAAATATAAAAACGA 584685 >seq1008 Length=50610 Score = 89.7 bits (98), Expect = 2e-14 Identities = 187/279 (67%), Gaps = 6/279 (2%) Strand=Plus/Minus Query 2109 ATAGCAAAAGAATTACTCAACTATCAATTTGGCGATGACCCTGAAGTAGTAATTGAATTT 2168 || || || ||||||||| |||||||||| || | | ||| || | | ||| Sbjct 17513 ATTGCTAACGAATTACTCTTATATCAATTTGATAATAATACCGAAAATATATATTATTTT 17454 Query 2169 TTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTATA 2228 |||||| || ||| | ||||| |||||| |||| |||| |||| || ||| Sbjct 17453 TTAACAGATTTAATAAATATAATAGATAAAAGAATTCCTAAATGTAATACATTAGCAATA 17394 Query 2229 AAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTT 2288 | ||| ||| ||||| || || | | |||| ||||| ||||| || | ||| | Sbjct 17393 TTAGCTCCACCTAATGCAGGCAAAAATTATATTTTTGATGCGGTTGCTTCTTTTTTCATA 17334 Query 2289 TCATATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCG 2348 || ||| | || ||||| || || |||| | ||||||| | || | ||| Sbjct 17333 AATTACGGTGTTTTGGGTACTGCTAACAAAACAATTAATTTTATG------GAAGCAGCA 17280 Query 2349 GGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAA 2387 || ||||| |||||||||||||| ||||| || || ||| Sbjct 17279 GGCAAACGTTTAGTTCTATGGAATGAACCTAATTACGAA 17241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17480224583000