Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acyrthosiphon_20pisum_20[refseq_20GCF_5F000142985.2_202010-06-24]
23,925 sequences; 541,692,442 total letters
Query= NC_005040.1
Length=5499
Score E
Sequences producing significant alignments: (Bits) Value
seq20 244 4e-61
seq43 127 7e-26
seq133 120 1e-23
seq893 118 4e-23
seq317 116 1e-22
seq1343 113 2e-21
seq9810 107 7e-20
seq1409 96.9 1e-16
seq1324 93.3 1e-15
seq1816 91.5 5e-15
seq802 91.5 5e-15
seq97 91.5 5e-15
seq1008 89.7 2e-14
>seq20
Length=1368841
Score = 244 bits (270), Expect = 4e-61
Identities = 265/347 (76%), Gaps = 6/347 (2%)
Strand=Plus/Minus
Query 2166 TTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGT 2225
||||| |||| | |||||||| ||||||||| | |||||||||||||| |||||
Sbjct 1059210 TTTTTGCTAACATTGTATAATGTGTTAGACAAAAAAATTCCGAAATTAAATTCATTATGT 1059151
Query 2226 ATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTG 2285
|| | | | || ||||| ||||| |||||||||| | |||| |||||||| |||||
Sbjct 1059150 ATTTACATTGAGCCATCGGCGGGTAAAAACTTTTTTT-CAATGCAGTTGCATCATATTT- 1059093
Query 2286 CTTTCA--TATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACG 2343
||| | || ||||||||||||||||| || ||||| ||||||||| | ||||||||||
Sbjct 1059092 -TTTAAATTACGGTATGTTCGGTACAGCAAACAAAAATAATAATTTTACTTGGGCAGACG 1059034
Query 2344 GAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAAA 2403
| ||||| ||| |||||||| ||||||| ||||| || ||||||||| | ||||| | ||
Sbjct 1059033 GTGCGGGAAAAAGATTAGTTATATGGAATGAACCGAATTATGAACAACATCATATTG-AA 1058975
Query 2404 AAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACG 2463
|||| |||||| | || || || |||||||| | | || ||||||||| ||||||
Sbjct 1058974 AAATGAAAGAATTATTAGGTGGTGATACAACTCGGGTTCACGTAAAATATAAAAACGATC 1058915
Query 2464 TTAGTGTGCAAAGGGTACCCATTATTATATTAACAAATAACCACTTG 2510
| ||| | ||| ||||| ||||||| ||||| |||||
Sbjct 1058914 AACCATTACAAGGACCACCTATTATATTATTAACTAATAATTACTTG 1058868
Score = 78.8 bits (86), Expect = 3e-11
Identities = 96/131 (73%), Gaps = 5/131 (4%)
Strand=Plus/Minus
Query 4321 AACACTTTCCAACCACATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTA 4380
||||||| |||| | | ||||| || | | ||| ||||| | ||||||| |||
Sbjct 1019873 AACACTTGCCAAAC-----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTA 1019819
Query 4381 TATCCTCCCGTGTGACCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCA 4440
|||||| | | | |||||||||||||| ||||| |||||| |||||||| |||
Sbjct 1019818 TATCCTGTTGACTTATGAATTGGCCTAGGTATGACAGCATTTTCAAGACTAGGATTCCCA 1019759
Query 4441 GTATCTGGGTC 4451
|||||||| ||
Sbjct 1019758 GTATCTGGATC 1019748
>seq43
Length=922428
Score = 127 bits (140), Expect = 7e-26
Identities = 211/303 (70%), Gaps = 4/303 (1%)
Strand=Plus/Plus
Query 2165 ATTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATG 2224
|||||| ||| ||| ||| | | || |||| | |||||||| |||||| ||
Sbjct 189787 ATTTTTGCAAACTCTAGTCAATATATTGGATAAAAAAATTCCGAAAAGAAATAGCATGCT 189846
Query 2225 TATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTT 2284
||| | |||||| || || || || | ||||||||||||||| || | | |||
Sbjct 189847 AATACATTCTCCCCCCAGCGCGGGCAAAAATTATTTTTTCGATGCCGTGGCCGCCTTTTT 189906
Query 2285 GCTTTCA--TATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGAC 2342
||| | || ||||||||||| || ||||| |||| |||||||| | | ||
Sbjct 189907 --TTTGAATTACGGTATGTTCGGAACTGCCAACAAAACGAATAATTTCAGTTTCTCCGAT 189964
Query 2343 GGAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAA 2402
|| || || ||||| | || | ||||||||||| || || || || ||| | |||
Sbjct 189965 GGTGCCGGCAAACGTCTCGTCATTTGGAACGAACCTAATTACGAGGTGTATCATTTGGAA 190024
Query 2403 AAAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGAC 2462
||||| || ||||| || || || ||||| || ||| ||||||| ||||| ||||||
Sbjct 190025 AAAATGAAGGAACTATTAGGAGGGGATACCACTAGAGTACATGTCAAATACAAAAACGAT 190084
Query 2463 GTT 2465
|||
Sbjct 190085 GTT 190087
>seq133
Length=817148
Score = 120 bits (132), Expect = 1e-23
Identities = 208/301 (69%), Gaps = 1/301 (0%)
Strand=Plus/Minus
Query 2165 ATTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATG 2224
|||||| ||| ||| ||| | | || |||| | |||| ||| |||||| |||
Sbjct 230835 ATTTTTGCAAACTCTAGTCAATATATTGGATAAAAAAATTCCAAAAAGAAATAGCATACT 230776
Query 2225 TATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTT 2284
||| | ||| || || || || || | ||||||||| ||||| || | | |||
Sbjct 230775 AATACATTCTCCTCCGAGCGCGGGCAAAAATTATTTTTTCGACGCCGTAGCCGCCTTTTT 230716
Query 2285 GCTTTCAT-ATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACG 2343
|| || | ||||||||||| || ||||| |||| ||||||||| | | || |
Sbjct 230715 TTTTGAATTACGGTATGTTCGGAACTGCCAACAAAACGAATAATTTTAGTTTTTCCGATG 230656
Query 2344 GAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAAA 2403
| || || ||||| | || ||||||||||||| || || || || ||| | ||||
Sbjct 230655 GCGCCGGCAAACGTCTCGTCATATGGAACGAACCCAATTACGAGGTGTATCATTTGGAAA 230596
Query 2404 AAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACG 2463
|||| || || || || || || ||||| || ||| | ||||| |||||| |||||| |
Sbjct 230595 AAATGAAGGAGCTATTAGGAGGGGATACCACCAGAGTGCATGTTAAATATAAAAACGATG 230536
Query 2464 T 2464
|
Sbjct 230535 T 230535
>seq893
Length=162389
Score = 118 bits (130), Expect = 4e-23
Identities = 253/374 (68%), Gaps = 27/374 (7%)
Strand=Plus/Plus
Query 4096 ATAAATTTGTTCTGATTTAATGTGGCCAGGGAGCTCGTAGAGCTATTGGTTTCAAAAGCT 4155
||||||||||| ||||||||||| |||| || || || ||| |||||||||||
Sbjct 95377 ATAAATTTGTTTTGATTTAATGTTGCCAAATTACTGGTTGATGCATTAGTTTCAAAAGCA 95436
Query 4156 GTGCGAGGATTACGCATGACACCCTTGCATTTGA-CTTCAGTGCATATAGCACCTCTGGG 4214
|| |||||||||||||| || | |||||||| | || || | | || ||| | |
Sbjct 95437 GTACGAGGATTACGCATTACTACTTTGCATTTCACCTCCAACACTTTTA----CTCCGCG 95492
Query 4215 T--------AAAAAT----TTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCAC 4262
| || ||| ||||| || || || |||||||| || |||||| ||| ||
Sbjct 95493 TATTTTACAAACAATATTATTAAATTCTGAAGGAGACATATAAAAATAAGGTTTGTCTAC 95552
Query 4263 GGGCACACTCATTAAACTCGTTGTCCCAAGATAGGCGTTATC---AGTGTTAAGAT--AT 4317
|| | ||||||| ||||| || | | || || | ||| ||| | |
Sbjct 95553 AGGTAAGTACATTAAAGATGTTGTTCCCAAACGTTCGCTAGCAAAAGTTCCAAGTTGGAG 95612
Query 4318 CGCAACACTTTCCAACCACATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATA 4377
| || |||| ||| || || ||||| || | | ||| ||||| | |||||
Sbjct 95613 CTGAATACTTGCCA--CA---CCATAACTAATTATTGAATGGTTTTTTCTAAACACCATT 95667
Query 4378 GTATATCCTCCCGTGTGACCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTG 4437
||||||||| | | | |||||||||||||| ||| | ||||||| |||||||||
Sbjct 95668 GTATATCCTGTTGACTTATGAATTGGCCTAGGTATGACAACATTTTCAGTGCTAGGATTC 95727
Query 4438 CCAGTATCTGGGTC 4451
||||||||||| ||
Sbjct 95728 CCAGTATCTGGATC 95741
>seq317
Length=235664
Score = 116 bits (128), Expect = 1e-22
Identities = 208/302 (69%), Gaps = 4/302 (1%)
Strand=Plus/Plus
Query 2165 ATTTTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATG 2224
|||||| ||| ||| ||| | | || |||| | |||| ||| |||||| |||
Sbjct 118598 ATTTTTGCAAACTCTAGTCAATATATTGGATAAAAAAATTCCAAAAAGAAATAGCATACT 118657
Query 2225 TATAAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTT 2284
||| | ||| || || || || || | ||||||||| ||||| || | | |||
Sbjct 118658 AATACATTCTCCTCCGAGCGCGGGCAAAAATTATTTTTTCGACGCCGTAGCCGCCTTTTT 118717
Query 2285 GCTTTCA--TATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGAC 2342
||| | || ||||||||||| || ||||| |||| ||||||||| | | ||
Sbjct 118718 --TTTGAATTACGGTATGTTCGGAACTGCCAACAAAACGAATAATTTTAGTTTTTCCGAT 118775
Query 2343 GGAGCGGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAACAATACCATATAGAA 2402
|| | || ||||| | || ||||||||||||| || || || || ||| | |||
Sbjct 118776 GGTACCGGCAAACGTCTCGTCATATGGAACGAACCCAATTACGAGGTGTATCATTTGGAA 118835
Query 2403 AAAATAAAAGAACTTTTGGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGAC 2462
||||| || || || || || || ||||| || ||| | ||||| |||||| ||||||
Sbjct 118836 AAAATGAAGGAGCTATTAGGAGGGGATACCACCAGAGTGCATGTTAAATATAAAAACGAT 118895
Query 2463 GT 2464
||
Sbjct 118896 GT 118897
>seq1343
Length=17696
Score = 113 bits (124), Expect = 2e-21
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 2256 ttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGTTCGGTACAGCCA 2313
||| ||||||| ||||| || | | ||| ||| | || ||||||||||| || ||||
Sbjct 15594 TTTATTTTCGACGCCGTAGCCGCCTTTTTTTTTTGAATTACGGTATGTTCGGAACTGCCA 15535
Query 2314 ATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCTATGGAACG 2373
| |||| |||| |||| | | || || || || ||||| | || |||||||||
Sbjct 15534 ACAAAACGAATATTTTTAGTTTTTCCGATGGCGCCGGCAAACGTCTCGTCATATGGAACG 15475
Query 2374 AACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGGAGATACAA 2433
|||| || || || ||| ||| | |||||||| || || || || || || ||||| |
Sbjct 15474 AACCCAATTACGAGGTATATCATTTGGAAAAAATGAAGGAGCTATTAGGAGGGGATACCA 15415
Query 2434 CAAGAATACATGTAAAATATGCAAACGACGT 2464
| ||| | ||||| |||||| |||||| ||
Sbjct 15414 CCAGAGTGCATGTTAAATATAAAAACGATGT 15384
>seq9810
Length=816
Score = 107 bits (118), Expect = 7e-20
Identities = 151/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 2256 ttttttttCGATGCCGTTGCATCGTATTTGCTTTCAT-ATGGTATGTTCGGTACAGCCAA 2314
||||||||||| ||||| || | | ||| ||| || | ||||||||||| || |||||
Sbjct 1 TTTTTTTTCGACGCCGTAGCCGCCTTTTT--TTTAATTACGGTATGTTCGGAACTGCCAA 58
Query 2315 TAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCTATGGAACGA 2374
|||| ||||||||| | | || || || || ||| | || ||||||||||
Sbjct 59 CAAAACGAATAATTTTAGTTTTTCCGATGGCGCCGGCAAATTTCTCGTCATATGGAACGA 118
Query 2375 ACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGGAGATACAAC 2434
||| || || || || ||| | |||||||| || || || || || || ||||| ||
Sbjct 119 ACCCAATTACGAGGTGTATCATTTGGAAAAAATGAAGGAGCTATTAGGAGGGGATACCAC 178
Query 2435 AAGAATACATGTAAAATATGCAAACGACGT 2464
||| | ||||| |||||| |||||| ||
Sbjct 179 TAGAGTGCATGTTAAATATAAAAACGATGT 208
>seq1409
Length=15286
Score = 96.9 bits (106), Expect = 1e-16
Identities = 165/236 (70%), Gaps = 10/236 (4%)
Strand=Plus/Minus
Query 4221 TTTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCACGGGCACACTCATTAAACT 4280
|||||| || || || ||||||||||| | |||| ||| ||||| | | |||||||
Sbjct 7536 TTTAAATTCTGATGGAGACATATAGAAATATGGTTTGTCTACGGGTAGATACATTAAAGA 7477
Query 4281 CGTTGTCCCAAGATAGGCGTTATCAG-TGTTA-AGAT---ATCGCAACACTTTCCAACCA 4335
||||| || | | || || || |||| | || | | ||||||| |||| |
Sbjct 7476 GGTTGTTCCCAAACGTTCGCTAGCAAATGTTCCAAATTGGAGCTGAACACTTGCCAAAC- 7418
Query 4336 CATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTATATCCTCCCGTGTGA 4395
| ||||| || | | ||| ||||| | ||||||| ||||||||| | | |
Sbjct 7417 ----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTATATCCTGTTGACTTA 7362
Query 4396 CCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCAGTATCTGGGTC 4451
|||||||||||||| ||||| |||||| |||||||| ||||||||||| ||
Sbjct 7361 TGAATTGGCCTAGGTATGACAGCATTTTCAAGACTAGGATTCCCAGTATCTGGATC 7306
Score = 95.1 bits (104), Expect = 4e-16
Identities = 245/368 (67%), Gaps = 19/368 (5%)
Strand=Plus/Minus
Query 4098 AAATTTGTTCTGATTTAATGTGGCCAGGGAGCTCGTAGAGCTATTGGTTTCAAAAGCTGT 4157
|||||| || || ||||| || || | |||||||| ||| |||||||| || ||
Sbjct 14764 AAATTTATTTTGGTTTAAAGTAGCTAAATTACTCGTAGACGCATTTGTTTCAAATGCAGT 14705
Query 4158 GCGAGGATTACGCATGACACCCTTGCATTTGACTT-CAGTGCATATAG--CACCTCTGGG 4214
|| ||||| | ||| || | || ||| |||| || | | | || ||| | | |
Sbjct 14704 ACGTGGATTTCTCATTACTACTTTACATGAAACTTGCAATACCTTTACGCCACGTATATG 14645
Query 4215 TAAAAA------TTTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCACGGGCAC 4268
| | | |||||| || || || ||||||||||| | |||| || ||||| |
Sbjct 14644 TGATACAATATTTTTAAATTCTGATGGAGACATATAGAAATATGGTTTATCTACGGGTAG 14585
Query 4269 ACTCATTAAACTCGTTGTCCCAAGATAGGCGTTATCAG-TGTTA-AGAT---ATCGCAAC 4323
||||||| ||||| || | | || || || |||| | || | | |||
Sbjct 14584 GTACATTAAAGAGGTTGTTCCCAAACGTTCGCTAGCAAATGTTCCAAATTGGAGCTGAAC 14525
Query 4324 ACTTTCCAACCACATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTATAT 4383
|||| |||| | | ||||| || | | ||| ||||| | ||||||| ||||||
Sbjct 14524 ACTTGCCAAAC-----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTATAT 14470
Query 4384 CCTCCCGTGTGACCGATTGGCCTAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCAGTA 4443
||| | | | |||||||||||||| ||||| |||||| |||||||| ||||||
Sbjct 14469 CCTGTTGACTTATGAATTGGCCTAGGTATGACAGCATTTTCAAGACTAGGATTCCCAGTA 14410
Query 4444 TCTGGGTC 4451
||||| ||
Sbjct 14409 TCTGGATC 14402
Score = 80.6 bits (88), Expect = 9e-12
Identities = 179/265 (68%), Gaps = 8/265 (3%)
Strand=Plus/Minus
Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGT 2301
|||||||| || |||||||| || || || || |||| ||| ||| | || || |
Sbjct 9299 GCAGGTAAAAATTTTTTTTTTGACGCTGTAGCTTCGTTTTT--TTTAAATTACGGGTGTT 9242
Query 2302 TCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAG 2361
| ||||| || ||||||| |||||||| ||| || | ||| || ||||| | |
Sbjct 9241 TGGGTACTGCTAATAAAACGAATAATTTCGCGTTTATGGAAGCAGCAGGCAAACGCCTCG 9182
Query 2362 TTCTATGGAACGAACCAAACTATGAA--CAATACCATATAGAAAAAATAAAAGAACTTTT 2419
| || ||||| ||||||||||||||| |||| || | | || | |||| | | ||
Sbjct 9181 TACTTTGGAATGAACCAAACTATGAAAGCAAT--CACGTGAACGAATTGAAAGCATTATT 9124
Query 2420 GGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACGTTAGTGTGCAAAGGGT 2479
|| |||||| | ||| | || || |||||| || || | ||| |
Sbjct 9123 AGGTGGAGATTCTTGCAGAGTTCAAGTTAAATATAAAAGTGATCAACCACTTCAAGGTCC 9064
Query 2480 ACCCATTATTATATTAACAAATAAC 2504
||| |||||||||||||| ||| ||
Sbjct 9063 ACCAATTATTATATTAACTAATGAC 9039
>seq1324
Length=37283
Score = 93.3 bits (102), Expect = 1e-15
Identities = 190/280 (68%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 2109 ATAGCAAAAGAATTACTCAACTATCAATTTGGCGATGACCCTGAAG-TAGTAATTGAATT 2167
|| || || |||||||| ||||||||| | || | | ||| || | ||| | ||
Sbjct 12611 ATTGCTAATGAATTACTTTTACATCAATTTGACAATAATACCGAAAATATTTATT-ATTT 12669
Query 2168 TTTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTAT 2227
||||||| || ||| | ||||| |||||| |||| |||| ||| || ||
Sbjct 12670 TTTAACAGATTTAATAAATATAATAGATAAAAGAATTCCTAAATGTAATTCATTAGCAAT 12729
Query 2228 AAAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCT 2287
| | ||| ||| ||||| | || | |||||| ||||| ||||| || | ||| |
Sbjct 12730 ATTAGCTCCACCTCATGCAGGCGAAAATTATTTTTTTGATGCGGTTGCTTCCTTTTTCAT 12789
Query 2288 TTCATATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGC 2347
|| ||| | || ||||| || || |||| ||||||||| | | || | |||
Sbjct 12790 AAATTACGGTGTTTTGGGTACTGCTAACAAAACAAATAATTTTGCATTTATGGAAGCAGC 12849
Query 2348 GGGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAA 2387
|| ||||| |||||||||||||| ||||| || || |||
Sbjct 12850 AGGCAAACGTTTAGTTCTATGGAATGAACCTAATTACGAA 12889
Score = 84.2 bits (92), Expect = 8e-13
Identities = 170/247 (69%), Gaps = 4/247 (2%)
Strand=Plus/Plus
Query 2184 AATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTATAAAAAGTCCCCCTTCG 2243
||||| || || ||| | |||||||||| || | || ||| | || |||
Sbjct 29404 AATGTTATTGATAAACGTGTTCCGAAATGCAACACATTAGCAATACTAGCACCACCTAAC 29463
Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCATATGGTATGT-T 2302
||||| || || | |||||| ||||| ||||| || | ||| | |||||| ||| |
Sbjct 29464 GCAGGGAAAAATTATTTTTT-GATGCTGTTGCTTCTTTTTTA-TAAATTATGGT-TGTCT 29520
Query 2303 CGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGT 2362
|| ||||| ||||||| ||||| || | | || | ||| |||||| | |||||
Sbjct 29521 TGGAACAGCGAATAAAACTAATAACTTCGCTTTTATGGAAGCAGCAGGTAAAAGGTTAGT 29580
Query 2363 TCTATGGAACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGG 2422
||||||||| |||||||| |||||| | | ||| | | || | |||| ||| || ||
Sbjct 29581 TCTATGGAATGAACCAAATTATGAAGCAAATCATGTTAACGAACTCAAAGCACTGTTAGG 29640
Query 2423 GGGAGAT 2429
|| |||
Sbjct 29641 TGGTGAT 29647
>seq1816
Length=21341
Score = 91.5 bits (100), Expect = 5e-15
Identities = 170/247 (69%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 2184 AATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTATAAAAAGTCCCCCTTCG 2243
||||| || || ||| | |||||||||| || | || ||| | || |||
Sbjct 3122 AATGTTATTGATAAACGTGTTCCGAAATGCAACACATTAGCAATACTAGCACCACCTAAC 3063
Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCATATGGTATGT-T 2302
||||| || || | |||||| ||||| ||||| || | ||| | |||||| ||| |
Sbjct 3062 GCAGGGAAAAATTATTTTTTTGATGCTGTTGCTTCTTTTTTTATAAATTATGGT-TGTCT 3004
Query 2303 CGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGT 2362
|| ||||| ||||||| ||||| || | | || | ||| |||||| | |||||
Sbjct 3003 TGGAACAGCGAATAAAACTAATAACTTCGCTTTTATGGAAGCAGCAGGTAAAAGGTTAGT 2944
Query 2363 TCTATGGAACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGG 2422
||||||||| |||||||| |||||| | | ||| | | || | |||| ||| || ||
Sbjct 2943 TCTATGGAATGAACCAAATTATGAAGCAAATCATGTTAACGAACTCAAAGCACTGTTAGG 2884
Query 2423 GGGAGAT 2429
|| |||
Sbjct 2883 TGGTGAT 2877
>seq802
Length=76345
Score = 91.5 bits (100), Expect = 5e-15
Identities = 165/237 (70%), Gaps = 11/237 (5%)
Strand=Plus/Plus
Query 4221 TTTAAACTCGGACGGCGACATATAGAACCAAGGTTGGTCCACGGGCACACTCATTAAACT 4280
|||||| || || || ||||||||||| | |||| ||| ||||| | | |||||||
Sbjct 22933 TTTAAATTCTGATGGAGACATATAGAAATATGGTTTGTCTACGGGTAGATACATTAAAGA 22992
Query 4281 CGTTGTCCCAAGATAGGCGTTATCAG-TGTTA-AGAT---ATCGCAACACTTTCCAACCA 4335
||||| || | | || || || |||| | || | | ||||||| |||| |
Sbjct 22993 GGTTGTTCCCAAACGTTCGCTAGCAAATGTTCCAAATTGGAGCTGAACACTTGCCAAAC- 23051
Query 4336 CATCCGTAACTGATGAAAGTATGTACTTTTCGGTAAACCATAGTATATCCTCCCGTGTGA 4395
| ||||| || | | ||| ||||| | ||||||| ||||||||| | | |
Sbjct 23052 ----CATAACTAATAATTGAATGATTTTTTCTGAAAACCATTGTATATCCTGTTGACTTA 23107
Query 4396 CCGATTGGCC-TAGGTATAACAGCGTTTTCAGAGCTAGGATTGCCAGTATCTGGGTC 4451
||||||| ||||||| ||||| |||||| |||||||| ||||||||||| ||
Sbjct 23108 TGAATTGGCCATAGGTATGACAGCATTTTCAAGACTAGGATTCCCAGTATCTGGATC 23164
Score = 80.6 bits (88), Expect = 9e-12
Identities = 104/144 (72%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCATATGGTATGTTC 2303
|| || || || | |||||| ||||| || || || | ||| | |||||| ||
Sbjct 8273 GCTGGCAAAAATTATTTTTTTGATGCTGTAGCGTCATTTTTCATAAACTATGGTTGTTTA 8332
Query 2304 GGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTT 2363
|| |||||||| |||| ||||||||| ||| || | ||| |||||| | |||||
Sbjct 8333 GGAACAGCCAACAAAACTAATAATTTTGCGTTCATGGAAGCAGCTGGTAAAAGGCTAGTT 8392
Query 2364 CTATGGAACGAACCAAACTATGAA 2387
|| ||||||||||| ||||| |||
Sbjct 8393 CTTTGGAACGAACCTAACTACGAA 8416
Score = 80.6 bits (88), Expect = 9e-12
Identities = 179/265 (68%), Gaps = 8/265 (3%)
Strand=Plus/Plus
Query 2244 GCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGT 2301
|||||||| || |||||||| || || || || |||| ||| ||| | || || |
Sbjct 21174 GCAGGTAAAAATTTTTTTTTTGACGCTGTAGCTTCGTTTTT--TTTAAATTACGGGTGTT 21231
Query 2302 TCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAG 2361
| ||||| || ||||||| |||||||| ||| || | ||| || ||||| | |
Sbjct 21232 TGGGTACTGCTAATAAAACGAATAATTTCGCGTTTATGGAAGCAGCAGGCAAACGCCTCG 21291
Query 2362 TTCTATGGAACGAACCAAACTATGAA--CAATACCATATAGAAAAAATAAAAGAACTTTT 2419
| || ||||| ||||||||||||||| |||| || | | || | |||| | | ||
Sbjct 21292 TACTTTGGAATGAACCAAACTATGAAAGCAAT--CACGTGAACGAATTGAAAGCATTATT 21349
Query 2420 GGGGGGAGATACAACAAGAATACATGTAAAATATGCAAACGACGTTAGTGTGCAAAGGGT 2479
|| |||||| | ||| | || || |||||| || || | ||| |
Sbjct 21350 AGGTGGAGATTCTTGCAGAGTTCAAGTTAAATATAAAAGTGATCAACCACTTCAAGGTCC 21409
Query 2480 ACCCATTATTATATTAACAAATAAC 2504
||| |||||||||||||| ||| ||
Sbjct 21410 ACCAATTATTATATTAACTAATGAC 21434
>seq97
Length=644085
Score = 91.5 bits (100), Expect = 5e-15
Identities = 184/271 (68%), Gaps = 4/271 (1%)
Strand=Plus/Plus
Query 2193 GACAAAAGAGTTCCGAAATTAAATAGTATATGTATAAAAAGTCCCCCTTCGGCAGGTAAG 2252
|| |||| | |||| ||| || ||| || | ||| | ||| || || || ||
Sbjct 584417 GATAAAAAAATTCCAAAAAGAAGTAGCATGTTAATACATTCTCCTCCGAGCGCGGGCAAA 584476
Query 2253 AACttttttttCGATGCCGTTGCATCGTATTTGCTTTCA--TATGGTATGTTCGGTACAG 2310
|| | ||||||| | ||||| || | | ||| ||| | || || |||||||| || |
Sbjct 584477 AAATATTTTTTCAACGCCGTAGCCGCCTTTTT--TTTAAATTACGGAATGTTCGGCACTG 584534
Query 2311 CCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCTATGGA 2370
|||| |||| |||||||| | || || || || ||| | | || ||||||
Sbjct 584535 CCAACAAAACGAATAATTTAATTTTTTTCGATGGCGCTGGCAAATGTCTCGTCATATGGA 584594
Query 2371 ACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGGAGATA 2430
||||||| || || || ||| ||| | |||||||| || || || || || | ||||
Sbjct 584595 ACGAACCCAATTACGAGGTATATCATTTGGAAAAAATTAAGGAGCTATTAGGATGGGATA 584654
Query 2431 CAACAAGAATACATGTAAAATATGCAAACGA 2461
| || ||| | ||||| |||||| ||||||
Sbjct 584655 CCACCAGAGTGCATGTTAAATATAAAAACGA 584685
>seq1008
Length=50610
Score = 89.7 bits (98), Expect = 2e-14
Identities = 187/279 (67%), Gaps = 6/279 (2%)
Strand=Plus/Minus
Query 2109 ATAGCAAAAGAATTACTCAACTATCAATTTGGCGATGACCCTGAAGTAGTAATTGAATTT 2168
|| || || ||||||||| |||||||||| || | | ||| || | | |||
Sbjct 17513 ATTGCTAACGAATTACTCTTATATCAATTTGATAATAATACCGAAAATATATATTATTTT 17454
Query 2169 TTAACAACACTATATAATGTCATAGACAAAAGAGTTCCGAAATTAAATAGTATATGTATA 2228
|||||| || ||| | ||||| |||||| |||| |||| |||| || |||
Sbjct 17453 TTAACAGATTTAATAAATATAATAGATAAAAGAATTCCTAAATGTAATACATTAGCAATA 17394
Query 2229 AAAAGTCCCCCTTCGGCAGGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTT 2288
| ||| ||| ||||| || || | | |||| ||||| ||||| || | ||| |
Sbjct 17393 TTAGCTCCACCTAATGCAGGCAAAAATTATATTTTTGATGCGGTTGCTTCTTTTTTCATA 17334
Query 2289 TCATATGGTATGTTCGGTACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCG 2348
|| ||| | || ||||| || || |||| | ||||||| | || | |||
Sbjct 17333 AATTACGGTGTTTTGGGTACTGCTAACAAAACAATTAATTTTATG------GAAGCAGCA 17280
Query 2349 GGTAAACGATTAGTTCTATGGAACGAACCAAACTATGAA 2387
|| ||||| |||||||||||||| ||||| || || |||
Sbjct 17279 GGCAAACGTTTAGTTCTATGGAATGAACCTAATTACGAA 17241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17480224583000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |