Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_021568.1
Length=1832
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 123 3e-25
>seq1076
Length=1981
Score = 123 bits (136), Expect = 3e-25
Identities = 220/317 (69%), Gaps = 8/317 (3%)
Strand=Plus/Minus
Query 548 AGTTCCCGGT-CGCGTATATTAAATATTTCAAAGGAATTGAACAGTACATACGAATCGCT 606
||| |||||| | || ||| ||||||| ||| ||||||||| || || || || |
Sbjct 1582 AGTGCCCGGTTCAAGT-TATCAAATATTACAAGGGAATTGAAGCTTATATTCGCCTCACA 1524
Query 607 CATGGAAGTGGAGAACGAGATTTTAAGACCGAATGCTTCTTTTACTGGGGAGCTACCGGG 666
| | ||||||||| ||||| || ||| || |||| ||| | ||||
Sbjct 1523 CGACCCATCCCAGAACGAGACTTTAAAACGGAAGTTAGATTCTACTATGGACGTCCCGGA 1464
Query 667 CTGGGCAAGTCCAGAGCCGCCCGCGAAGAAAGCAAAGCTACAGGAGAAGATACCTACTAC 726
||||||| ||| || | || ||| |||||||| |||| | | ||||||
Sbjct 1463 TCGGGCAAGAGTAGAAGAGCGCTCGCAGAGGCTAAAGCTACTGGAGGACGAATATACTAC 1404
Query 727 AAACCAAGAGGAGAATGGTGGGATGGATACTGTGGACAACCTAAT---GTGGTCATCGAC 783
|| || | ||||| ||||||||||||||| ||| | | | || |||||||
Sbjct 1403 AAGCCTCGCGGAGATTGGTGGGATGGATACAA---ACAGCATGAGTGCGTCATCATCGAT 1347
Query 784 GACTTTTATGGATGGATTAAATATGACGAACTTCTCAAAATTTGCGACCGATACCCCTAC 843
||||||||||||||||| |||||||| || | | ||||| |||||||| ||||| |||
Sbjct 1346 GACTTTTATGGATGGATAAAATATGATGATTTATTAAAAATATGCGACCGTTACCCTTAC 1287
Query 844 CGCGTCCCAGTCAAAGG 860
| || |||||||||||
Sbjct 1286 CAGGTACCAGTCAAAGG 1270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5751499198820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |