Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_021707.2 Length=1855 Score E Sequences producing significant alignments: (Bits) Value seq1076 159 4e-36 >seq1076 Length=1981 Score = 159 bits (176), Expect = 4e-36 Identities = 443/658 (67%), Gaps = 41/658 (6%) Strand=Plus/Minus Query 375 TATGTTACAGCAATTTGCAGCGACCTAAAAGATTTAACAGCATACGACAGAT--ATTTGG 432 |||||||||| | | | |||||| | ||||||||| ||| | | || | | |||| Sbjct 1819 TATGTTACAGTTCTCTTCGGCGACCCAGTAGATTTAAC-GCA-ATTAAAGCTGCAGTTGG 1762 Query 433 CGGACGAGCGCACATTGAAAGAGCTAAAGGAACTGATCTCGAAAATAAGGAATACTGCTC 492 | || ||||| |||| ||||||||||| |||| | ||||||| ||||| || Sbjct 1761 AGACCGCTGTCACATCGAAAAAGCTAAAGGAAATGATATACAAAATAAAGAATATTGTAG 1702 Query 493 TAAAG-GTGGCGATGTATGGGAATGCGGAACACCCTGTGCTCAAGGAAC-TAGAACAGA- 549 |||| | ||| || || | |||| ||||| ||||||| ||| || ||||| || Sbjct 1701 CAAAGAGGGGCAATTTACCG-AATGGGGAAC-CCCTGTGGGGCAGGGACGTAGAAGCGAT 1644 Query 550 --CCTCGAAAAGGTTGTTTCTGTCATTGAAGGAGGAGAGAGAAGCCTTAAAA--ACCTG- 604 |||||||| |||| | | | || ||||||| ||| || | | | Sbjct 1643 CTCCTCGAAA---TTGTACAACTTGTGCAGGGCGGAGAGA-----CTTCAATGGAGCGGA 1592 Query 605 --GCCATTCAGTTCCCAAT-CGCGTATATCAAGTATTACAAGGGAATTGAACAATACATT 661 ||| ||| ||| | | || |||||| |||||||||||||||||| || ||| Sbjct 1591 TCGCCCGAGAGTGCCCGGTTCAAGT-TATCAAATATTACAAGGGAATTGAAGCTTATATT 1533 Query 662 AGAATCGCTCATGGAAATTCAGAACGAGACTTTAAAACGGAAGTC---TTTTACTTTTGG 718 | || | | | ||||||||||||||||||||||||| || |||| | Sbjct 1532 CGCCTCACACGACCCATCCCAGAACGAGACTTTAAAACGGAAGTTAGATTCTACTAT--- 1476 Query 719 GGACCGACTGGAACTGGAAAGTCCCGTA-AAGCGCGCGAGGAGAGCCTC--GCTCTTGGT 775 |||| | ||| | || ||| ||| ||| |||| | |||| || ||| ||| Sbjct 1475 GGACGTCCCGGATCGGGCAAGA---GTAGAAGAGCGCTCGCAGAGGCTAAAGCTACTGGA 1419 Query 776 G-AC--ACCTACTACAAGCCGCGTGGAGAATGGTGGGATGGATACACCGGACAACCGTGC 832 | || | ||||||||||| || ||||| |||||||||||||||| || |||| Sbjct 1418 GGACGAATATACTACAAGCCTCGCGGAGATTGGTGGGATGGATACAAACAGCATGAGTGC 1359 Query 833 GTTGTTATCGATGACTTCTACGGATGGATCAAATACGATGAGCTTCTCAAGATCTGCGAC 892 || | ||||||||||| || |||||||| ||||| ||||| | | || || |||||| Sbjct 1358 GTCATCATCGATGACTTTTATGGATGGATAAAATATGATGATTTATTAAAAATATGCGAC 1299 Query 893 AGATATCCTTACAGAGTCCCTGTCAAAGGAGGATATGAAAACTTCGTATCTAAATATATA 952 | || |||||| || || |||||||| | ||| | || || ||||||||| Sbjct 1298 CGTTACCCTTACCAGGTACCAGTCAAAGGGTCCTTCGAACAATTTACTTCGAAATATATA 1239 Query 953 TGGATCACAAGCGAACGATGTTTAGAAGAGGTGTATAGATTTATAGGTTATGATTGTA 1010 ||||| ||| | | | || ||| | | ||||| ||||| || |||||||||| Sbjct 1238 TGGATTACATCCAATGTGGGGTTGGAAAATATTTATAGGTTTATTGGATATGATTGTA 1181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5825072325390