Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025476.1 Length=1865 Score E Sequences producing significant alignments: (Bits) Value seq1076 113 5e-22 >seq1076 Length=1981 Score = 113 bits (124), Expect = 5e-22 Identities = 233/341 (68%), Gaps = 13/341 (4%) Strand=Plus/Plus Query 896 TGTGATCCATATATATTTAGATACGAAGTTTTCATATCCTCCTTTGACAGGGACTCTGTA 955 ||| |||||||||||||| || || | ||| | |||||||| || || ||| Sbjct 1230 TGTAATCCATATATATTTCGAAGTAAATTGTTCGAAGGACCCTTTGACTGGTACCTGGTA 1289 Query 956 AGGATATCTGTCGCAGATCTTGAGAAGCTCGTCGTATTTGATCCATCCGTAGAAGTCATC 1015 ||| || | |||||| || || | | || || ||||| |||||||| || |||||||| Sbjct 1290 AGGGTAACGGTCGCATATTTTTAATAAATCATCATATTTTATCCATCCATAAAAGTCATC 1349 Query 1016 GATAACAACGCAGGGTTGTCCGGTGTATCCATCCCACCATTCTCCGCGCGGCTTGTAGTA 1075 ||| | ||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 1350 GATGATGACGCACTCATGCTGTTTGTATCCATCCCACCAATCTCCGCGAGGCTTGTAGTA 1409 Query 1076 GGTTTCACCGAGAGCGCGGCTTT--CCT---CGCGCGCTTTACGGGACTTTCCAGTTCCA 1130 || || | | ||||| ||| || ||||| | | ||| || | ||| Sbjct 1410 TATTCGTCCTCCA--GTAGCTTTAGCCTCTGCGAGCGCTCTTCTACTCTTGCCCGATCCG 1467 Query 1131 GTTGATCCCCAAAAGTAAAA---GACTTCCGTTTTAAAGTCTCGTTCTTGATTTCCATGA 1187 | || | | | |||| || |||||||||||||||||||||||| | | | Sbjct 1468 G--GA-CGTCCATAGTAGAATCTAACTTCCGTTTTAAAGTCTCGTTCTGGGATGGGTCGT 1524 Query 1188 GCGACTCTAATGTATTGTTCAATTCCTTTGAAATACTTGAT 1228 | || | ||| || ||||||||| ||| |||| ||||| Sbjct 1525 GTGAGGCGAATATAAGCTTCAATTCCCTTGTAATATTTGAT 1565 Score = 77.0 bits (84), Expect = 4e-11 Identities = 73/93 (78%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 1627 GGAGGTTATATaaaaaaaaT---TACCAAAATCCCTGGAGATGTTTTGTTCCAGTTGTAG 1683 |||| |||| ||| ||||| |||||| |||| || ||||| |||||||||| || Sbjct 70 GGAGAGTATAAAAATAAAATATTTACCAATATCCTTGAAGATGGCGTGTTCCAGTTCGAG 129 Query 1684 GACAAATCTCTCGACCAAATATAGCAAATTTAC 1716 |||||||||||| ||| | |||||| |||||| Sbjct 130 GACAAATCTCTCTACCCAGGATAGCATATTTAC 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5857060641290