Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_025476.1
Length=1865
Score E
Sequences producing significant alignments: (Bits) Value
seq1076 113 5e-22
>seq1076
Length=1981
Score = 113 bits (124), Expect = 5e-22
Identities = 233/341 (68%), Gaps = 13/341 (4%)
Strand=Plus/Plus
Query 896 TGTGATCCATATATATTTAGATACGAAGTTTTCATATCCTCCTTTGACAGGGACTCTGTA 955
||| |||||||||||||| || || | ||| | |||||||| || || |||
Sbjct 1230 TGTAATCCATATATATTTCGAAGTAAATTGTTCGAAGGACCCTTTGACTGGTACCTGGTA 1289
Query 956 AGGATATCTGTCGCAGATCTTGAGAAGCTCGTCGTATTTGATCCATCCGTAGAAGTCATC 1015
||| || | |||||| || || | | || || ||||| |||||||| || ||||||||
Sbjct 1290 AGGGTAACGGTCGCATATTTTTAATAAATCATCATATTTTATCCATCCATAAAAGTCATC 1349
Query 1016 GATAACAACGCAGGGTTGTCCGGTGTATCCATCCCACCATTCTCCGCGCGGCTTGTAGTA 1075
||| | ||||| || |||||||||||||||| |||||||| |||||||||||
Sbjct 1350 GATGATGACGCACTCATGCTGTTTGTATCCATCCCACCAATCTCCGCGAGGCTTGTAGTA 1409
Query 1076 GGTTTCACCGAGAGCGCGGCTTT--CCT---CGCGCGCTTTACGGGACTTTCCAGTTCCA 1130
|| || | | ||||| ||| || ||||| | | ||| || | |||
Sbjct 1410 TATTCGTCCTCCA--GTAGCTTTAGCCTCTGCGAGCGCTCTTCTACTCTTGCCCGATCCG 1467
Query 1131 GTTGATCCCCAAAAGTAAAA---GACTTCCGTTTTAAAGTCTCGTTCTTGATTTCCATGA 1187
| || | | | |||| || |||||||||||||||||||||||| | | |
Sbjct 1468 G--GA-CGTCCATAGTAGAATCTAACTTCCGTTTTAAAGTCTCGTTCTGGGATGGGTCGT 1524
Query 1188 GCGACTCTAATGTATTGTTCAATTCCTTTGAAATACTTGAT 1228
| || | ||| || ||||||||| ||| |||| |||||
Sbjct 1525 GTGAGGCGAATATAAGCTTCAATTCCCTTGTAATATTTGAT 1565
Score = 77.0 bits (84), Expect = 4e-11
Identities = 73/93 (78%), Gaps = 3/93 (3%)
Strand=Plus/Plus
Query 1627 GGAGGTTATATaaaaaaaaT---TACCAAAATCCCTGGAGATGTTTTGTTCCAGTTGTAG 1683
|||| |||| ||| ||||| |||||| |||| || ||||| |||||||||| ||
Sbjct 70 GGAGAGTATAAAAATAAAATATTTACCAATATCCTTGAAGATGGCGTGTTCCAGTTCGAG 129
Query 1684 GACAAATCTCTCGACCAAATATAGCAAATTTAC 1716
|||||||||||| ||| | |||||| ||||||
Sbjct 130 GACAAATCTCTCTACCCAGGATAGCATATTTAC 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5857060641290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |