Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025792.1 Length=1790 Score E Sequences producing significant alignments: (Bits) Value seq1076 107 2e-20 >seq1076 Length=1981 Score = 107 bits (118), Expect = 2e-20 Identities = 200/293 (68%), Gaps = 13/293 (4%) Strand=Plus/Plus Query 857 GTTTTATATAATCAATTTATTTC------AATTTTACATGTAATGCGTCTTTCGAACGCT 910 |||| ||| |||||||||||||| ||||| ||| ||||||| | || Sbjct 1127 GTTTAATA-AATCAATTTATTTCTTCAATAATTTCACAA------CGTCTTTTAATTGCC 1179 Query 911 GCATTATTGTATCCAATAAAGTTGTAAAGTTTATTTGTGTCTACATTGCTCGTAAACCAT 970 | | || ||||||||||| | |||| || | | |||||| |||| |||| Sbjct 1180 GTACAATCATATCCAATAAACCTATAAATATTTTCCAACCCCACATTGGATGTAATCCAT 1239 Query 971 ATGCGTGTACTTGTAAATTCCTCGAAcccccccTTTATTTGTACTTTGTAAGGGTATCTG 1030 || | | ||||||| ||||| ||| || | | |||| | ||||||||| | | Sbjct 1240 ATATATTTCGAAGTAAATTGTTCGAAGGACCCTTTGACTGGTACCTGGTAAGGGTAACGG 1299 Query 1031 TCAGTAATTTTGAGTAGTTCGTCGTATTTGATCCACCCGTAGAAGTCGTCGATGATGACG 1090 || ||||| | || || || ||||| ||||| || || ||||| |||||||||||| Sbjct 1300 TCGCATATTTTTAATAAATCATCATATTTTATCCATCCATAAAAGTCATCGATGATGACG 1359 Query 1091 TTCTCTTGTTGCTTGTATCCGTCCCACCACAAGCCCCTTGGCTTGTAGTAGAT 1143 ||| || || |||||||| |||||||| || | ||||||||||| || Sbjct 1360 CACTCATGCTGTTTGTATCCATCCCACCAATCTCCGCGAGGCTTGTAGTATAT 1412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5617148272040