Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_027530.1 Length=1789 Score E Sequences producing significant alignments: (Bits) Value seq1076 109 6e-21 >seq1076 Length=1981 Score = 109 bits (120), Expect = 6e-21 Identities = 211/308 (69%), Gaps = 9/308 (3%) Strand=Plus/Plus Query 845 ACATTACTTGTAATCCAAATATATTTAGTTGTGAATTCCTCGAACCCTCCTTTAATCTGA 904 ||||| ||||||||| |||||||| | || |||| ||||| ||||| | | Sbjct 1222 ACATTGGATGTAATCCATATATATTTCGAAGTAAATTGTTCGAAGGACCCTTTGACTGGT 1281 Query 905 ACTTTATACGGATAACGATC-CATAATTTTAAGCATTTCATCATACTTTATCCATCCATA 963 || | || || ||||| || |||| |||||| | | ||||||| |||||||||||||| Sbjct 1282 ACCTGGTAAGGGTAACGGTCGCATATTTTTAATAAAT-CATCATATTTTATCCATCCATA 1340 Query 964 GAAATCATCTATGATGACGCATGTTTGCTGAGCGTAGCCGTCCCACCAGAGACCTCTAGG 1023 || ||||| ||||||||||| ||||| ||| || |||||||| || | ||| Sbjct 1341 AAAGTCATCGATGATGACGCACTCATGCTGTTTGTATCCATCCCACCAATCTCCGCGAGG 1400 Query 1024 TTTGTAGTAAAT--GGAATCCAGCCCTCTGATTTTAGCTTCTTCCAAGGCTGTCCTAGAT 1081 |||||||| || | ||||| | |||||| ||| | | ||| | ||| Sbjct 1401 CTTGTAGTATATTCGTCCTCCAG-----TAGCTTTAGCCTCTGCGAGCGCTCTTCTACTC 1455 Query 1082 TTGCCAGTCCCCGGTTCTCCGTAGTAGTAGAAGACCTCAGTTTTGAAGTCTCTAACGGGA 1141 ||||| | || || ||| |||||| | || || ||||| ||||||| | || Sbjct 1456 TTGCCCGATCCGGGACGTCCATAGTAGAATCTAACTTCCGTTTTAAAGTCTCGTTCTGGG 1515 Query 1142 ATAGGTCG 1149 || ||||| Sbjct 1516 ATGGGTCG 1523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5613949440450