Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq6040 104 1e-18 >seq6040 Length=4363 Score = 104 bits (114), Expect = 1e-18 Identities = 115/146 (79%), Gaps = 8/146 (5%) Strand=Plus/Plus Query 5626 CGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGATTTAGTGCTT-TACGGCACCT 5684 |||||| ||||||||||||||||||| ||||||||||||||||| || |||| || || Sbjct 288 CGTCAACTGCTAAATCGGGGGATCCCTTCAGGGTTCCGATTTAGTGGTTGTACGACA-CT 346 Query 5685 CGACCTCCAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTG-ATAGA 5743 | ||| | || | | ||||||||||||||| | ||| |||||||||||| | || Sbjct 347 C--CCTATTCATCCTAGTTATGGGTGATGGTTCACATGGTGAGCCATCGCCCTGTAAAGC 404 Query 5744 CGGTTTT-TCGCCCTTTGA--CGTTG 5766 ||||||| | ||||| || ||||| Sbjct 405 CGGTTTTAACCCCCTTCGAGGCGTTG 430 Score = 104 bits (114), Expect = 1e-18 Identities = 115/146 (79%), Gaps = 8/146 (5%) Strand=Plus/Plus Query 5626 CGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGATTTAGTGCTT-TACGGCACCT 5684 |||||| ||||||||||||||||||| ||||||||||||||||| || |||| || || Sbjct 2438 CGTCAACTGCTAAATCGGGGGATCCCTTCAGGGTTCCGATTTAGTGGTTGTACGACA-CT 2496 Query 5685 CGACCTCCAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTG-ATAGA 5743 | ||| | || | | ||||||||||||||| | ||| |||||||||||| | || Sbjct 2497 C--CCTATTCATCCTAGTTATGGGTGATGGTTCACATGGTGAGCCATCGCCCTGTAAAGC 2554 Query 5744 CGGTTTT-TCGCCCTTTGA--CGTTG 5766 ||||||| | ||||| || ||||| Sbjct 2555 CGGTTTTAACCCCCTTCGAGGCGTTG 2580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20378795058720