Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025824.1
Length=6408
Score E
Sequences producing significant alignments: (Bits) Value
seq6040 104 1e-18
>seq6040
Length=4363
Score = 104 bits (114), Expect = 1e-18
Identities = 115/146 (79%), Gaps = 8/146 (5%)
Strand=Plus/Plus
Query 5626 CGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGATTTAGTGCTT-TACGGCACCT 5684
|||||| ||||||||||||||||||| ||||||||||||||||| || |||| || ||
Sbjct 288 CGTCAACTGCTAAATCGGGGGATCCCTTCAGGGTTCCGATTTAGTGGTTGTACGACA-CT 346
Query 5685 CGACCTCCAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTG-ATAGA 5743
| ||| | || | | ||||||||||||||| | ||| |||||||||||| | ||
Sbjct 347 C--CCTATTCATCCTAGTTATGGGTGATGGTTCACATGGTGAGCCATCGCCCTGTAAAGC 404
Query 5744 CGGTTTT-TCGCCCTTTGA--CGTTG 5766
||||||| | ||||| || |||||
Sbjct 405 CGGTTTTAACCCCCTTCGAGGCGTTG 430
Score = 104 bits (114), Expect = 1e-18
Identities = 115/146 (79%), Gaps = 8/146 (5%)
Strand=Plus/Plus
Query 5626 CGTCAAGCTCTAAATCGGGGGATCCCTTTAGGGTTCCGATTTAGTGCTT-TACGGCACCT 5684
|||||| ||||||||||||||||||| ||||||||||||||||| || |||| || ||
Sbjct 2438 CGTCAACTGCTAAATCGGGGGATCCCTTCAGGGTTCCGATTTAGTGGTTGTACGACA-CT 2496
Query 5685 CGACCTCCAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTG-ATAGA 5743
| ||| | || | | ||||||||||||||| | ||| |||||||||||| | ||
Sbjct 2497 C--CCTATTCATCCTAGTTATGGGTGATGGTTCACATGGTGAGCCATCGCCCTGTAAAGC 2554
Query 5744 CGGTTTT-TCGCCCTTTGA--CGTTG 5766
||||||| | ||||| || |||||
Sbjct 2555 CGGTTTTAACCCCCTTCGAGGCGTTG 2580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 20378795058720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |