Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_018450.1 Length=5053 Score E Sequences producing significant alignments: (Bits) Value seq2685 87.8 6e-14 >seq2685 Length=1747149 Score = 87.8 bits (96), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 2210 TAAGTCCTCCGAGTGCTGGTAAAAACTTTTTCATAGAAACTGTTTTAGCATT-TTATTGG 2268 ||||||| || ||||||||||||| | ||| || || ||| || || |||| || || Sbjct 1455439 TAAGTCCGCCATGTGCTGGTAAAAATTATTTTATCGATACTTTTGTA-CATTATTGTTTA 1455381 Query 2269 AATACTGGTGTTATTCAAAATTTCAATCGGTATCACAGTTTTCCTCTTATGGAAGCTGTC 2328 ||| |||| | |||||||||| ||||| |||||||| | | |||| ||| Sbjct 1455380 AATTTTGGTCAAGTAGGAAATTTCAATAGGTATTGTAGTTTTCCGTTAACGGAATGTGTA 1455321 Query 2329 AATAGAAGAGTAA-ATTATTGGGATGAACCAAACTTTGAACCTGATGCAACTGAAACGTT 2387 ||| ||| ||| |||| ||| ||||||||| || ||| | ||| || ||||| || Sbjct 1455320 GATAAAAGGATAATATTA-TGGAATGAACCAATATTAGAAGCATCTGCTACAGAAACATT 1455262 Query 2388 GAAAAAATTATTTGCTGG 2405 |||| |||||| ||| Sbjct 1455261 AAAAATGTTATTTKGTGG 1455244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16057019367220