Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_018450.1
Length=5053
Score E
Sequences producing significant alignments: (Bits) Value
seq2685 87.8 6e-14
>seq2685
Length=1747149
Score = 87.8 bits (96), Expect = 6e-14
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 2210 TAAGTCCTCCGAGTGCTGGTAAAAACTTTTTCATAGAAACTGTTTTAGCATT-TTATTGG 2268
||||||| || ||||||||||||| | ||| || || ||| || || |||| || ||
Sbjct 1455439 TAAGTCCGCCATGTGCTGGTAAAAATTATTTTATCGATACTTTTGTA-CATTATTGTTTA 1455381
Query 2269 AATACTGGTGTTATTCAAAATTTCAATCGGTATCACAGTTTTCCTCTTATGGAAGCTGTC 2328
||| |||| | |||||||||| ||||| |||||||| | | |||| |||
Sbjct 1455380 AATTTTGGTCAAGTAGGAAATTTCAATAGGTATTGTAGTTTTCCGTTAACGGAATGTGTA 1455321
Query 2329 AATAGAAGAGTAA-ATTATTGGGATGAACCAAACTTTGAACCTGATGCAACTGAAACGTT 2387
||| ||| ||| |||| ||| ||||||||| || ||| | ||| || ||||| ||
Sbjct 1455320 GATAAAAGGATAATATTA-TGGAATGAACCAATATTAGAAGCATCTGCTACAGAAACATT 1455262
Query 2388 GAAAAAATTATTTGCTGG 2405
|||| |||||| |||
Sbjct 1455261 AAAAATGTTATTTKGTGG 1455244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16057019367220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |