Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_030296.1 Length=5071 Score E Sequences producing significant alignments: (Bits) Value seq1266 78.8 3e-11 >seq1266 Length=9838 Score = 78.8 bits (86), Expect = 3e-11 Identities = 123/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1923 TAGCTaaaaaaaaTACCTTTTTTGTTCTCTCCCCATCGAATGCTGGCAAAAATTTTTTCT 1982 || |||||||||||| ||||| || | || ||| | ||| |||| ||||||| ||||| Sbjct 3903 TACCTAAAAAAAATAGTATTTTTATTTTATCACCACCTAATTCTGGAAAAAATTATTTCT 3962 Query 1983 TCGATTGCATTGTACATTTTTATTTGAATTTCGGTCTGATCGGTAATTTTAATAAGTACC 2042 | ||| || |||| || | | |||| || | || || |||||||||| || Sbjct 3963 TTGATGCTGAGGTTCATTATTGTATAAATTATGGCCAAATGGGCAATTTTAATAGATATT 4022 Query 2043 AAAATTTCCCTTTACAAGAGTGTGTTCACAAACGTATTCTTCTGTGGAACGAACCA 2098 | || || ||| || || ||| | ||||||||| | | |||||||||||| Sbjct 4023 GTACATTTCCATTAATGGAATGCGTTGATAAACGTATTATATTATGGAACGAACCA 4078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16114617284440