Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_006555.1 Length=5039 Score E Sequences producing significant alignments: (Bits) Value seq243 84.2 7e-13 >seq243 Length=2441701 Score = 84.2 bits (92), Expect = 7e-13 Identities = 143/199 (72%), Gaps = 10/199 (5%) Strand=Plus/Plus Query 2236 CCTAGTGCTGGTAAAAATTATTTTATAGACGCTATATTGTCCTTT-TATT-TGAATACTG 2293 |||| |||||||||||||| |||| | ||| | ||| | | ||| | ||||||| Sbjct 1573427 CCTAATGCTGGTAAAAATTTTTTTTTTGAC--TGCGTTGCACAATCTATGATTAATACTG 1573484 Query 2294 GAATTATATTAAACTTTAATAGATTTAGTCA--ATTTCCACTTATGGAAGCTGTTAATAG 2351 || ||| ||||||||||| ||| ||| ||||||||| || || || || ||| Sbjct 1573485 GACATATTGGTAACTTTAATAGGTTT--TCATCATTTCCACTAATTGAGGCAGTAGATAA 1573542 Query 2352 ACGTGTAAATGTATGGAATGAACCTAATTTTGAACCTGCAGCTTTAGA-CACCATAAAAA 2410 |||| | || ||||| ||||| ||| ||||||| |||| || || | | |||||| Sbjct 1573543 ACGTTTGTTAGTGTGGAACGAACCAAATGCTGAACCTTCAGCATTCGAGGATCTTAAAAA 1573602 Query 2411 TGTTGTTAGCTGGTGATCC 2429 ||| || | ||||||||| Sbjct 1573603 -GTTATTTGGTGGTGATCC 1573620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16009340809860