Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq8899 82.4 4e-12 >seq8899 Length=8765 Score = 82.4 bits (90), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 8/141 (6%) Strand=Plus/Plus Query 6927 GTGTGCACCAGCCCCGAGTCCGCATCCACACCAATGTGCGCTTTCATGCCGAAATGCCAC 6986 || ||||||||||| ||||||| || || || |||||| ||||| ||||| Sbjct 8111 GTATGCACCAGCCCGCTCCCCGCATCTACCCCTGCATGGCATTTCATCCCGAAGCGCCAC 8170 Query 6987 TGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCAC--GC--TTGCCGCTGCCATTCTT 7042 ||||| || || |||||||||||||| || ||||| | || || ||| | ||||| Sbjct 8171 TGGTTTCCCTTTTTGGTCTGGTGCATTTCCGGGTCCCTGGCTTTTTCCG----CGTTCTT 8226 Query 7043 GGTCGAACTGGGCGCGGCAAT 7063 ||| || ||||||||| |||| Sbjct 8227 GGTGGAGCTGGGCGCGTCAAT 8247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27320377947520