Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_001330.1 Length=6087 Score E Sequences producing significant alignments: (Bits) Value seq2076 95.1 5e-16 >seq2076 Length=268 Score = 95.1 bits (104), Expect = 5e-16 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 1293 GGCTGGTTCTTCGTATTTGATACGTTAACCCTTGCTGATGACCGTTTGCAGGCTTTTAAT 1352 || ||||| |||| ||||| || | || | ||||| ||||| || |||| ||| || Sbjct 73 GGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTAT 132 Query 1353 GAAAACCCCAATGCTCTTCGTGATTATTTCAGGACTGTTGGTCGAGCTGTTCTGCGCGCT 1412 || || ||||||||| | ||||| ||||| | | ||||||| ||||| || Sbjct 133 GATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCC 192 Query 1413 GAAGGTCGTTCGGTCAAGGATTCCTACAACGACTGCTATCGCTATCTTTGTGTGCCGGAG 1472 || ||||| || || ||||| || ||||||||||| ||| |||||||||| ||| Sbjct 193 GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAG 252 Query 1473 TTTGG 1477 | ||| Sbjct 253 TATGG 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19353732193932