Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq2076 219 1e-53 >seq2076 Length=268 Score = 219 bits (242), Expect = 1e-53 Identities = 205/261 (79%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 692 TCAACTATGAAGTCTCGACGTGGCTTTACCGTTCAAAGATTAATGAATGCTATGCGTACT 751 || |||||||| || || | |||||||| |||| | || |||||||| ||||| Sbjct 1 TCCACTATGAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGATGAATGCAATGCGACAG 60 Query 752 GCCCATTCTAAGGGCTGGTATGTCGTATTCGATACTCTTACTCTAGCCGATGACCGCTTA 811 || ||| || | || |||| | |||| || || ||||| || | || || ||||| ||| Sbjct 61 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTA 120 Query 812 AAGGATTTCTATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATG 871 ||| || |||||||||||||||||| | |||||||| || |||||||||||||||||| Sbjct 121 GAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATG 180 Query 872 GTGCTTACTGCCGAAGGTCGCTCGGTGCATGACTCATCTTCCGACTGCTATCAGTATTTT 931 || ||| ||||||| |||||| || |||| ||| |||||||||||||||||||| Sbjct 181 GTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTT 240 Query 932 TGTGTGCCAGAGTATGGTACA 952 |||||||| |||||||||||| Sbjct 241 TGTGTGCCTGAGTATGGTACA 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17725969481890