Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq2076 208 3e-50 >seq2076 Length=268 Score = 208 bits (230), Expect = 3e-50 Identities = 202/260 (78%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 692 TCCACCATGAAATCACGTAGAGGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACT 751 ||||| |||||||| |||||||||||||| | || | | |||||||| ||||| Sbjct 1 TCCACTATGAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGATGAATGCAATGCGACAG 60 Query 752 GCCCACACTGAGGGCTGGTACGTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTT 811 || || |||| || |||| | || || || ||||| || | || || ||||| | Sbjct 61 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTA 120 Query 812 AAGGATTTCTATGATAATCCCAATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATG 871 ||| || |||||||||||||||||| | ||||||||||| |||||||||||||||||| Sbjct 121 GAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATG 180 Query 872 GTTCTCACTGCCGAGGGTCGTTCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTT 931 ||||| ||||||||||||| | |||||||| | |||||||||||||||||| Sbjct 181 GTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTT 240 Query 932 TGTGTGCCTGAGTATGGCAC 951 ||||||||||||||||| || Sbjct 241 TGTGTGCCTGAGTATGGTAC 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17434907911545