Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq2076 221 4e-54 >seq2076 Length=268 Score = 221 bits (244), Expect = 4e-54 Identities = 207/261 (79%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 698 TCCACCATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACT 757 ||||| |||||||| || | |||||||| ||||| | ||||||||||| ||||| Sbjct 1 TCCACTATGAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGATGAATGCAATGCGACAG 60 Query 758 GCCCACACTGATGGCTGGTATGTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATT 817 || || ||||||| |||| | | || || || |||||||| || ||||| || || ||| Sbjct 61 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATT 119 Query 818 A-AGGACTTCTATGCTAACCCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTAT 876 | ||| || |||| ||| ||||||||| | ||||||||||| ||||||||||| ||||| Sbjct 120 AGAGGCGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTAT 179 Query 877 GGTTCTCACTGCCGAGGGTCGTTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTT 936 |||||| ||||||||||||| || |||||||| | |||||||||||||| || Sbjct 180 GGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTT 239 Query 937 TTGTGTGCCTGAGTATGGCAC 957 |||||||||||||||||| || Sbjct 240 TTGTGTGCCTGAGTATGGTAC 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17434907911545