Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calliphora_20vicina_20[genbank_20GCA_5F001017275.1_202015-06-01] 197,510 sequences; 459,231,066 total letters Query= NC_030296.1 Length=5071 Score E Sequences producing significant alignments: (Bits) Value seq193988 107 6e-20 >seq193988 Length=7806 Score = 107 bits (118), Expect = 6e-20 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 1928 aaaaaaaaTACCTTTTTTGTTCTCTCCCCATCGAATGCTGGCAAAAATTTTTTCTTCGAT 1987 |||||||| || ||||| | | || ||| | |||||||| ||||||| ||| || ||| Sbjct 218 AAAAAAAACACTATTTTTATATTATCACCACCCAATGCTGGGAAAAATTATTTTTTTGAT 277 Query 1988 TGCATTGTACATTTTTATTTGAATTTCGGTCTGATCGGTAATTTTAATAAGTACCAAAAT 2047 | || ||||||||| |||||||||||| | | | || ||||||||| || | Sbjct 278 TCTTTTATACATTTTTGTTTGAATTTCGGACAGGTTGGAAATTTTAATCGTTATTGTTCT 337 Query 2048 TTCCCTTTACAAGAGTGTGTTCACAAACGTATTCTTCTGTGGAACGAACCACAAGCTGAG 2107 || || ||| |||||||| ||||| | || | ||||||||||||| | ||| Sbjct 338 TTTCCATTAATGGAGTGTGTGGACAAAAGGATAATATTGTGGAACGAACCTGTATTAGAG 397 Query 2108 CCTAGTGCTTTTGAAACTCTGAAAACGTTACTCGGAGGCGAT 2149 || || |||||| | |||| |||| | ||||||||| Sbjct 398 CCATCAGCAACAGAAACTTTAAAAATGTTATTTGGAGGCGAT 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16080386887400