Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_001365.1 Length=8273 Score E Sequences producing significant alignments: (Bits) Value seq13494 443 1e-120 seq10155 352 1e-93 seq4052 322 3e-84 seq68896 223 2e-54 seq14856 212 3e-51 seq70930 129 3e-26 seq65094 105 4e-19 seq62271 105 4e-19 >seq13494 Length=2212 Score = 443 bits (490), Expect = 1e-120 Identities = 841/1225 (69%), Gaps = 80/1225 (7%) Strand=Plus/Minus Query 641 GTTTTATTGGTGGCGGCGATTGCGATATTTGGAACTGGTTTTATTACTGTTATTATTAAT 700 || ||||| || | |||| | ||||| |||||||| || ||||| || ||| |||||||| Sbjct 1502 GTGTTATTAGTTGTGGCGGTGGCGATTTTTGGAACCGGATTTATAACAGTTCTTATTAAT 1443 Query 701 CAATTTACATCAGCAAAAAATATTATTATGGATTTATATAATTCTGATACTTGGTTGATT 760 ||||| | ||| | ||||||||||||| ||||||||| ||| || ||| ||| | Sbjct 1442 CAATTGTCTGGAGCCACAAATATTATTATGAATTTATATAGTTCGAATGATTGATTGTTA 1383 Query 761 TGATTATTTGGTAGAATGGCAGTTTTGTTTAGTCATCCGTTAATGTTAACGATATCAAGT 820 | | |||||| |||||||||| ||| ||| | ||| ||| | ||| | Sbjct 1382 AAAGCAATTGGTAAGTTGGCAGTTTTATTTTCGCATGAAGTGATGCAAACTGTTTCAGGA 1323 Query 821 TTATATATTGTTGGGTTTATTGTTTCAAAAACATTGTATAGTTAGGAGTTGAGTTTA-TG 879 | ||||||||||| |||||| ||||||||||||| |||||||||||| | || || Sbjct 1322 ATTTATATTGTTGGATTTATTATTTCAAAAACATTATATAGTTAGGAGGAAAAAATAATG 1263 Query 880 AAAAAATCGttatctttatttgccatatttattttaac---ttttttgggtttggttatt 936 |||| ||| || |||| || | |||| | ||| || | || | || || Sbjct 1262 CGGAAATTTTTAGTTTGATTT------TTAACTTTACCGATTTTATTTGTTTCGTTTGTT 1209 Query 937 ccatttattactttaACGGCGTTTAGACCCTTAAATGAGGAGCAATAT---ACGCTTAAA 993 | || | | | || | | |||||| || || | || || || ||| | Sbjct 1208 CAGTTGAGTGCATTTTCTGT-TTTAGAAAAGTAC--GAAGTTAAAAATGAAACTGTTAGA 1152 Query 994 CAAGAAAGTAGTACTGGT---AAAGGTATTAATGAAACTGATTTTATTAATACAATGTTT 1050 || || | |||||| | ||| ||||||||| ||||||||||||||||||||| Sbjct 1151 AAAAAACGAAGTACTAATTTTAAA---ATTAATGAAGAAGATTTTATTAATACAATGTTT 1095 Query 1051 TTACGCAGTAGtttttttGAAAATTGGTCGGAAACAAATTATTTTATTAATCCAACTTTA 1110 || || |||||||||||||||||||| || |||||||||||| |||| ||||||||| Sbjct 1094 TTGCGAAGTAGTTTTTTTGAAAATTGAAGTGATACAAATTATTTTGTTAACCCAACTTTA 1035 Query 1111 AAAACATCAAAAAATTTATTGTTTAATGATAAATGGTATTTAGATTTTTTACAAGATAGT 1170 ||||||||||| ||| | |||||| || || ||| ||||||||||| |||| ||| Sbjct 1034 AAAACATCAAAGTTATTAACTTATAATGAAAATTGATATCTAGATTTTTTAAAAGACAGT 975 Query 1171 TATTCAACCGGAGTTGTTTATGATAAACCTGGTGAAATATTTTT-GAATTATTATCGACA 1229 ||| |||| || |||| | |||||||||| |||| | |||||| |||||| ||| | | Sbjct 974 TATGCAACTGGGATTGTGTTTGATAAACCTAGTGATAAATTTTTAGAATTA-TATAAAAA 916 Query 1230 ATGACAT-AGTTTAAAAAATAAGTATATGGTTGAaaaattttatgatgttaaaaaagaga 1288 ||| || ||| | || || |||| | || | ||||||| ||||| | ||| | Sbjct 915 TTGAGATAAGTATGTGCAACAA-TATAAATTAGATAGATTTTATAATGTTGATAAAAAAT 857 Query 1289 attttttgaatgatttaactgattttatttatgcttttGCTGTAAAATATAAGATGTTTG 1348 |||||| || |||||||| ||||||| ||| | | || ||||||| |||| Sbjct 856 TTTTTTTAAAAGATTTAACAAATTTTATGTATACACATTTTGAAAAATAT--GATGGCAC 799 Query 1349 ATGTATCGAAAGAAATTGTGGAAAATGTTGACCGCTATAAAGAAAATCATTATCCAAGAG 1408 ||| | |||||| || || | || ||| | ||||| ||| | || Sbjct 798 TGGTAAAGTAAGAAA-AATGAAACA----GA---GTATTA--AAAAT--TTAGAGCA-AG 752 Query 1409 TTAAGTTAAAACAAGATAATTGAAAATTAATTACTGATTATAATTGACTTAAAGATAATT 1468 | || || || ||||| ||||||||||||||| ||||||||||| | || |||| Sbjct 751 TAAAATTTAATCAAGACAATTGAAAATTAATTGATGATTATAATTCATTTGTTTTTAATA 692 Query 1469 TTGATAATAAATATTATTTTGTAATTTGGAAACAATCTTATAGTAAAGAATGAGAAATAA 1528 ||||||||| ||||||| | ||| ||| | | |||||||| ||||| ||||| Sbjct 691 AAAATAATAAATTTTATTTTTTTGTTTTTCAACTTTTTAATAGTAAACAATGAAAAATAT 632 Query 1529 TGAAATTTAAACATAATATGCGTTATGATATGAAAATAGA------------------AA 1570 | |||||||||||||||| || || || ||||||| | Sbjct 631 TAAAATTTAAACATAATACAGATTTTGCTAAACAAATAGATGGTATTTCTTTTATTCCTA 572 Query 1571 GTTACATTAAAAATAATTCT------------TTTAAAGGTCTTTATCGTTGAGATGGTG 1618 || | || ||| | || || ||||||||||||||||||||||||||| Sbjct 571 GTGATATAAAAGTTTATGCTGAAGCAAATAAATTTAAAGGTCTTTATCGTTGAGATGGTA 512 Query 1619 ATGGTGAACCACAAACACCTACTATCGACAAAAACACTGGTGAAATTACTGATTGAAATA 1678 | | |||||| || || || || | ||||||||||| ||||| ||||||||| | | Sbjct 511 ACAGCGAACCAACAATTCCAACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-A 453 Query 1679 GTTATCAACAAAGTCGTGTAAAACAGTTTATTGATTTATCTTTATATTCTGTTTTGCAAG 1738 ||| || || | || ||| |||| ||| | || ||| | || Sbjct 452 TTTAGTAATGAA-------ATAAATTTTTTTTGAAATAT-TACTGATGAAGTTATAAGAG 401 Query 1739 AAAATATTAGAGTTCAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAA 1798 ||||||||||||| || ||||||||||||||| ||||||||||| | || ||||| Sbjct 400 AAAATATTAGAGTGCAACAAGGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAA 341 Query 1799 CAAAGCGGATAATTTTTGATTTTGA 1823 || | ||||||||||||||||| Sbjct 340 CACAAAAAATAATTTTTGATTTTGA 316 >seq10155 Length=2122 Score = 352 bits (390), Expect = 1e-93 Identities = 602/865 (70%), Gaps = 61/865 (7%) Strand=Plus/Minus Query 991 AAACAAGAAAGTAGTACTGGTAAAGGTATTAATGAAACTGATTTTATTAATACAATGTTT 1050 ||| || ||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct 2099 AAAAAACGAAGTACTAATTTTAAA---ATTAATGAAGAAGATTTTATTAATACAATGTTT 2043 Query 1051 TTACGCAGTAGtttttttGAAAATTGGTCGGAAACAAATTATTTTATTAATCCAACTTTA 1110 || || |||||||||||||||||||| || |||||||||||| |||| ||||||||| Sbjct 2042 TTGCGAAGTAGTTTTTTTGAAAATTGAAGTGATACAAATTATTTTGTTAACCCAACTTTA 1983 Query 1111 AAAACATCAAAAAATTTATTGTTTAATGATAAATGGTATTTAGATTTTTTACAAGATAGT 1170 ||||||||||| ||| | |||||| || || ||| ||||||||||| |||| ||| Sbjct 1982 AAAACATCAAAGTTATTAACTTATAATGAAAATTGATATCTAGATTTTTTAAAAGACAGT 1923 Query 1171 TATTCAACCGGAGTTGTTTATGATAAACCTGGTGAAATATTTTT-GAATTATTATCGACA 1229 ||| |||| || |||| | |||||||||| |||| | |||||| |||||| ||| | | Sbjct 1922 TATGCAACTGGGATTGTGTTTGATAAACCTAGTGATAAATTTTTAGAATTA-TATAAAAA 1864 Query 1230 ATGACAT-AGTTTAAAAAATAAGTATATGGTTGAaaaattttatgatgttaaaaaagaga 1288 ||| || ||| | || || |||| | || | ||||||| ||||| | ||| | Sbjct 1863 TTGAGATAAGTATGTGCAACAA-TATAAATTAGATAGATTTTATAATGTTGATAAAAAAT 1805 Query 1289 attttttgaatgatttaactgattttatttatgcttttGCTGTAAAATATAAGATGTTTG 1348 |||||| || |||||||| ||||||| ||| | | || ||||||| |||| Sbjct 1804 TTTTTTTAAAAGATTTAACAAATTTTATGTATACACATTTTGAAAAATAT--GATGGCAC 1747 Query 1349 ATGTATCGAAAGAAATTGTGGAAAATGTTGACCGCTATAAAGAAAATCATTATCCAAGAG 1408 ||| | |||||| || || | || ||| | ||||| ||| | || Sbjct 1746 TGGTAAAGTAAGAAA-AATGAAACA----GA---GTATTA--AAAAT--TTAGAGCA-AG 1700 Query 1409 TTAAGTTAAAACAAGATAATTGAAAATTAATTACTGATTATAATTGACTTAAAGATAATT 1468 | || || || ||||| ||||||||||||||| ||||||||||| | || |||| Sbjct 1699 TAAAATTTAATCAAGACAATTGAAAATTAATTGATGATTATAATTCATTTGTTTTTAATA 1640 Query 1469 TTGATAATAAATATTATTTTGTAATTTGGAAACAATCTTATAGTAAAGAATGAGAAATAA 1528 ||||||||| ||||||| | ||| ||| | | |||||||| ||||| ||||| Sbjct 1639 AAAATAATAAATTTTATTTTTTTGTTTTTCAACTTTTTAATAGTAAACAATGAAAAATAT 1580 Query 1529 TGAAATTTAAACATAATATGCGTTATGATATGAAAATAGA------------------AA 1570 | |||||||||||||||| || || || ||||||| | Sbjct 1579 TAAAATTTAAACATAATACAGATTTTGCTAAACAAATAGATGGTATTTCTTTTATTCCTA 1520 Query 1571 GTTACATTAAAAATAATTCT------------TTTAAAGGTCTTTATCGTTGAGATGGTG 1618 || | || ||| | || || ||||||||||||||||||||||||||| Sbjct 1519 GTGATATAAAAGTTTATGCTGAAGCAAATAAATTTAAAGGTCTTTATCGTTGAGATGGTA 1460 Query 1619 ATGGTGAACCACAAACACCTACTATCGACAAAAACACTGGTGAAATTACTGATTGAAATA 1678 | | |||||| || || || || | ||||||||||| ||||| ||||||||| | | Sbjct 1459 ACAGCGAACCAACAATTCCAACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-A 1401 Query 1679 GTTATCAACAAAGTCGTGTAAAACAGTTTATTGATTTATCTTTATATTCTGTTTTGCAAG 1738 ||| || || | || ||| |||| ||| | || ||| | || Sbjct 1400 TTTAGTAATGAA-------ATAAATTTTTTTTGAAATAT-TACTGATGAAGTTATAAGAG 1349 Query 1739 AAAATATTAGAGTTCAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAA 1798 ||||||||||||| || ||||||||||||||| ||||||||||| | || ||||| Sbjct 1348 AAAATATTAGAGTGCAACAAGGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAA 1289 Query 1799 CAAAGCGGATAATTTTTGATTTTGA 1823 || | ||||||||||||||||| Sbjct 1288 CACAAAAAATAATTTTTGATTTTGA 1264 Score = 349 bits (386), Expect = 2e-92 Identities = 548/780 (70%), Gaps = 24/780 (3%) Strand=Plus/Minus Query 2253 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2310 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 762 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 705 Query 2311 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2370 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 704 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 645 Query 2371 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2430 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 644 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 585 Query 2431 TCTGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2490 |||||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 584 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 525 Query 2491 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAAT 2550 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 524 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAAA 468 Query 2551 ATTAAGTTAAATTCGGGTTATGTTTTTGGCGGTGATTTACAAAATAAATATGGTTTGCAA 2610 |||| || |||||| | |||| | | |||| ||||| || | | Sbjct 467 GTTAATGAGAAAGAAGGTTATTTGTTTGAAGAT------AAAAAGCAATATTCATTACGA 414 Query 2611 TATaaaaaaaTTGAAGAA--CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAA 2668 | ||| ||| | || |||||| | || ||| |||||||||||| |||||||||| Sbjct 413 GTT--AAAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCACAAA 356 Query 2669 AAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGAAA 2728 |||| ||||| | || | || || |||||||||||||| |||||||| ||| |||| Sbjct 355 AAGAAAATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAACTGAAAAGATT 296 Query 2729 TTAATAATGGTGGGTTG--TTCCCCGATAAACAATGATGACAAGTGCAATATGTAACGCC 2786 | | || | | ||||| || | || |||||| | ||| || || Sbjct 295 TAACTA--GTTTGGTTGACAAACCAGCAGGTCAGTGATGAAGCGAACAAATTGAAAATTG 238 Query 2787 AAAGGGTTGATGAGATTTTGGTGCTCATATTAAAAATGCGGTGATTTGAATTGTCAATAC 2846 || |||| ||| | | | |||||| ||||||| || |||||||| |||| Sbjct 237 TAA---ATGATACGATATGGTTTGTCATATCAAAAATGGTACCATATGAATTGTTAATAA 181 Query 2847 TATTCCCGGTGTTAAACAAGTTAATGAATTAGCGAGTGGTGTTGGTAAGGTTTTTGAAAC 2906 ||| || ||||||||||||| || || ||||| ||||| |||||||| | ||| |||| Sbjct 180 TATCCCTGGTGTTAAACAAGCAAACGAGTTAGCCAGTGGAGTTGGTAAATTATTTCAAAC 121 Query 2907 AGTATATAGtttttttAGTCAAATATTTGAAGTATGAAAATTTAATCCAGCATTGTATAG 2966 ||||| ||||||| ||||| ||||||| |||||||||| ||| || || |||| Sbjct 120 GACATATAATTTTTTTGCTCAAACATTTGAAATATGAAAATTCAATTTAGATTTTTATAT 61 Query 2967 TACAATAACAAATATTTTNNNNNNNNNNNNNTTTATGAAATTTGTGCGATTAATATAAAA 3026 | || || ||||| || |||||||||||| | ||| | | ||||| Sbjct 60 TGTCATTACTAATATATTTTTATTAATTGTATTTATGAAATTTATTCGAATGTTTTAAAA 1 >seq4052 Length=3016 Score = 322 bits (356), Expect = 3e-84 Identities = 482/675 (71%), Gaps = 22/675 (3%) Strand=Plus/Plus Query 2253 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2310 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 918 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 975 Query 2311 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2370 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 976 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 1035 Query 2371 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2430 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 1036 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 1095 Query 2431 TCTGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2490 |||||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 1096 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 1155 Query 2491 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAAT 2550 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 1156 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAAA 1212 Query 2551 ATTAAGTTAAATTCGGGTTATGTTTTTGGCGGTGATTTACAAAATAAATATGGTTTGCAA 2610 |||| || |||||| | |||| | | |||| ||||| |||| | Sbjct 1213 GTTAATGAGAAAGAAGGTTATTTGTTTGAAGAT------AAAAAGCAATATCCATTGCGA 1266 Query 2611 TATaaaaaaaTTGAAGAA--CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAA 2668 | ||| ||| | || |||||| | || ||| |||||||||||| ||||| |||| Sbjct 1267 GTT--AAAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCCCAAA 1324 Query 2669 AAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGAAA 2728 |||| ||||| | |||| ||||| |||||||||||||| ||||| |||||| ||| | Sbjct 1325 AAGAAAATGAATTTTACCATTATTACGATTTTAATTTTGGAATTTACAATTGAAAAG-AT 1383 Query 2729 TTAATAATGGTGGGTTGTTCCCCGATA-AACAATGATGACAAGTGCAATATGTAACGCCA 2787 |||| | | | | || | | ||||||||| | ||| || || Sbjct 1384 TTAACTAGTCTAGTTGACAAACCAACAGGACAATGATGGAGCGAACAAATTGAAAACTGT 1443 Query 2788 AAGGGTTGATGAGATTTTGGTGCTCATATTAAAAATGCGGTGATTTGAATTGTCAATACT 2847 ||| |||| ||| | | | |||| | ||||||| | || |||||||| |||| | Sbjct 1444 AAG---TGATATGATATGGTTTGTCATTTAAAAAATGGTGCCATATGAATTGTAAATAAT 1500 Query 2848 ATTCCCGGTGTTAAACAAGTTAATGAATTAGCGAGTGGTGTTGGTAAGGTTTTTGAAACA 2907 || || ||||||||||||| || || ||||||||||| || ||||| | ||| |||| Sbjct 1501 ATACCAGGTGTTAAACAAGCAAACGAGTTAGCGAGTGGAGTAGGTAAATTATTTCAAACG 1560 Query 2908 GTATATAGttttttt 2922 ||||| ||||||| Sbjct 1561 ACATATAATTTTTTT 1575 Score = 152 bits (168), Expect = 3e-33 Identities = 286/425 (67%), Gaps = 39/425 (9%) Strand=Plus/Plus Query 1429 TGAAAATTAATTACTGATTATAATTGACTTAAAGATAATTTTGATAATAAATATTATTTT 1488 |||||||||||| ||||||||||| | || |||| ||||||||| ||||||| Sbjct 1 TGAAAATTAATTGATGATTATAATTCATTTGTTTTTAATAAAAATAATAAATTTTATTTT 60 Query 1489 GTAATTTGGAAACAATCTTATAGTAAAGAATGAGAAATAATGAAATTTAAACATAATATG 1548 | ||| ||| | | |||||||| ||||| ||||| | |||||||||||||||| Sbjct 61 TTTGTTTTTCAACTTTTTAATAGTAAACAATGAAAAATATTAAAATTTAAACATAATACA 120 Query 1549 CGTTATGATATGAAAATAGA------------------AAGTTACATTAAAAATAATTCT 1590 || || || ||||||| ||| | || ||| | || || Sbjct 121 GATTTTGCTAAACAAATAGATGGTATTTCTTTTATTCCTAGTGATATAAAAGTTTATGCT 180 Query 1591 ------------TTTAAAGGTCTTTATCGTTGAGATGGTGATGGTGAACCACAAACACCT 1638 ||||||||||||||||||||||||||| | | |||||| || || Sbjct 181 GAAGCAAATAAATTTAAAGGTCTTTATCGTTGAGATGGTAACAGCGAACCAACAATTCCA 240 Query 1639 ACTATCGACAAAAACACTGGTGAAATTACTGATTGAAATAGTTATCAACAAAGTCGTGTA 1698 || || | ||||||||||| ||||| ||||||||| | | ||| || || | Sbjct 241 ACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-ATTTAGTAATGAA-------A 292 Query 1699 AAACAGTTTATTGATTTATCTTTATATTCTGTTTTGCAAGAAAATATTAGAGTTCAGCAA 1758 || ||| |||| ||| | || ||| | ||||||||||||||| || ||| Sbjct 293 TAAATTTTTTTTGAAATAT-TACTGATGAAGTTATAAGAGAAAATATTAGAGTGCAACAA 351 Query 1759 GGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGAT 1818 |||||||||||| ||||||||||| | || ||||||| | |||||||||||| Sbjct 352 GGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAACACAAAAAATAATTTTTGAT 411 Query 1819 TTTGA 1823 ||||| Sbjct 412 TTTGA 416 >seq68896 Length=2876 Score = 223 bits (246), Expect = 2e-54 Identities = 365/525 (70%), Gaps = 56/525 (11%) Strand=Plus/Minus Query 2253 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2310 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 617 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 560 Query 2311 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2370 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 559 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 500 Query 2371 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2430 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 499 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 440 Query 2431 TCTGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2490 |||||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 439 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 380 Query 2491 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAAT 2550 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 379 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAAA 323 Query 2551 ATTAAGTTAAATTCGGGTTATGTTTTTG----------------------GCG-GT---- 2583 |||| || |||||| | |||| ||| || Sbjct 322 GTTAATGAGAAAGAAGGTTATTTGTTTGAAGATAAAAAGCAATATCCATTGCGAGTTAAA 263 Query 2584 GATTTA-CAA---AATAAATATGGT------TTGCAATAT----------aaaaaaaTTG 2623 |||||| ||| || || || ||| || ||||| ||| ||| Sbjct 262 GATTTATCAATTCAAAAAGTAGGGTATGGTGTTTNAATATTCATTACGAGTTAAAGATTT 203 Query 2624 AAGAA--CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAAAAGAGAATGATAT 2681 | || |||||| | || ||| |||||||||||| |||||||||||||| ||||| | Sbjct 202 ATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCACAAAAAGAAAATGAGTT 143 Query 2682 GTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGA 2726 || | || || |||||||||||||| |||||||| ||| |||| Sbjct 142 TTATCATTACTACGATTTTAATTTTGGAATTTATAACTGAAAAGA 98 Score = 197 bits (218), Expect = 7e-47 Identities = 327/467 (70%), Gaps = 29/467 (6%) Strand=Plus/Minus Query 624 AAGTAATGATTAAATTAGTTTTATTGGTGGCGGCGATTGCGATATTTGGAACTGGTTTTA 683 |||||||||||||||| || ||||| || | |||| | ||||| |||||||| || |||| Sbjct 2375 AAGTAATGATTAAATTGGTGTTATTAGTTGTGGCGGTGGCGATTTTTGGAACCGGATTTA 2316 Query 684 TTACTGTTATTATTAATCAATTTACATCAGCAAAAAATATTATTATGGATTTATATAATT 743 | || ||| ||||||||||||| | ||| | ||||||||||||| ||||||||| || Sbjct 2315 TAACAGTTCTTATTAATCAATTGTCTGGAGCCACAAATATTATTATGAATTTATATAGTT 2256 Query 744 CTGATACTTGGTTGATTTGATTATTTGGTAGAATGGCAGTTTTGTTTAGTCATCCGTTAA 803 | || ||| ||| | | | |||||| |||||||||| ||| ||| | | Sbjct 2255 CGAATGATTGATTGTTAAAAGCAATTGGTAAGTTGGCAGTTTTATTTTCGCATGAAGTGA 2196 Query 804 TGTTAACGATATCAAGTTTATATATTGTTGGGTTTATTGTTTCAAAAACATTGTATAGTT 863 || ||| | ||| | | ||||||||||| |||||| ||||||||||||| ||||||| Sbjct 2195 TGCAAACTGTTTCAGGAATTTATATTGTTGGATTTATTATTTCAAAAACATTATATAGTT 2136 Query 864 AGGAGTTGAGTTTATGAAAAAAT-----CGttatctttatttgccatatttatttta--- 915 ||||| |||||||| | || |||| || | | || | |||| Sbjct 2135 AGGAG---------GGAAAAAATAATGCGGAAATTTTTAGTTTCATTTTTAACTTTACCG 2085 Query 916 acttttttgggtttggttattccatttattactttaACGGCGTTTAGACCCTTAAATGAG 975 | ||| || | || | || ||| || | | | || | | |||||| || ||| Sbjct 2084 ATTTTATTTGTTTCGTTTGTTCAGTTAAGTGCATTTTCTG-TTTTAGA--AAAAAGTGAA 2028 Query 976 G--AGCAAT-ATACGCTTAAACAAGAAAGTAGTAC---TGGTAAAGGTATTAATGAAACT 1029 | | ||| | | ||| | || || ||||||| | |||| ||||||||| Sbjct 2027 GTTAAAAATGAAAGTGTTAGAAAAAAACGTAGTACTAATTTTAAA---ATTAATGAAGAA 1971 Query 1030 GATTTTATTAATACAATGTTTTTACGCAGTAGtttttttGAAAATTG 1076 |||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct 1970 TATTTTATTAACACAATATTTTTACGCAGCAGTTTTTTTGAAAATTG 1924 Score = 194 bits (214), Expect = 9e-46 Identities = 171/213 (80%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 36 TTGCTAATAAGTATGATAGTCAATGGTTAAAGTTTGTGCGTGATTTAAAGAATGATGAAA 95 |||||||||| ||||||||| | || ||| ||||| ||||||||||| |||||||||| Sbjct 2876 TTGCTAATAAATATGATAGTTATTGATTATCATTTGTTCGTGATTTAAAAAATGATGAAA 2817 Query 96 TTGTTAATAAAAAAGAATATTATTGGTCGGAAATCACAAAATTAAGTGTTAAAGAACGAT 155 ||| ||||||| |||||||| ||| | || || | ||||| | | ||||||||| | Sbjct 2816 TTGAAAATAAAACAGAATATTTTTGAACTGATATTGCTAAATTGACTAATAAAGAACGCT 2757 Query 156 TGGAGTTATTTGATATTGATATTTTgaaaaagaatttaaaacctaaaa---aagagaaag 212 | || |||||||| ||||||||||||||||| ||||||||||| |||| || |||||| Sbjct 2756 TAGAATTATTTGACATTGATATTTTGAAAAATAATTTAAAACCAAAAACAGAAAAGAAAG 2697 Query 213 gaaatggtaaagaTGATTAATTTATTAGTTGAA 245 |||| | |||||||||||| |||| |||| Sbjct 2696 GAAAAAAAGATGATGATTAATTTTTTAGCTGAA 2664 Score = 113 bits (124), Expect = 2e-21 Identities = 163/227 (72%), Gaps = 11/227 (5%) Strand=Plus/Minus Query 1601 TTTATCGTTGAGATGGTGATGGTGAACCACAAACACCTACTATCGACAAAAACACTGGTG 1660 ||||| |||||||||||| ||| ||||||||||||| || || | || |||| Sbjct 1385 TTTATTGTTGAGATGGTGGGGGTCAACCACAAACACCACAGATTGATACCAA---TGGTA 1329 Query 1661 AAATTACTGATTGAAATAG----TTATCAACAAAGTCGTGTAAAACAGTTTATTGATTTA 1716 | ||| | || |||||| |||| |||||| || ||| | ||| | || | Sbjct 1328 ATGTTAA-GTTTAAAATAGATATTTATAAACAAAAA---GTTAAAGATTTTTTAAATGAA 1273 Query 1717 TCTTTATATTCTGTTTTGCAAGAAAATATTAGAGTTCAGCAAGGTGGTAGTGCGGATTAT 1776 | |||| || | || | ||||||||||||||||| || ||||||||| ||||| ||||| Sbjct 1272 TATTTAGATATTATTATTCAAGAAAATATTAGAGTGCAACAAGGTGGTGGTGCGAATTAT 1213 Query 1777 GAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGATTTTGA 1823 |||||| || | ||||||| | ||||||||||||||||| Sbjct 1212 GAAAATTTAGATCAACATGGAACACAAAAAATAATTTTTGATTTTGA 1166 >seq14856 Length=1519 Score = 212 bits (234), Expect = 3e-51 Identities = 229/299 (77%), Gaps = 7/299 (2%) Strand=Plus/Plus Query 2253 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2310 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 1145 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 1202 Query 2311 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2370 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 1203 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 1262 Query 2371 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2430 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 1263 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 1322 Query 2431 TCTGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2490 |||||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 1323 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 1382 Query 2491 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAA 2549 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 1383 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAA 1438 Score = 183 bits (202), Expect = 2e-42 Identities = 444/665 (67%), Gaps = 58/665 (9%) Strand=Plus/Plus Query 1191 TGATAAACCTGGTGAAATATTTTT-GAATTATTATCGACAATGACATA-GTTTAAAAAAT 1248 |||||||||| |||| | |||||| ||||||| || | | ||| ||| || | || Sbjct 5 TGATAAACCTAGTGATAAATTTTTAGAATTAT-ATAAAAATTGAGATAAGTATGTGCAAC 63 Query 1249 AAGTATATGGTTGAaaaattttatgatgttaaaaaagagaattttttgaatgatttaact 1308 || |||| | || | ||||||| ||||| | ||| | |||||| || |||||||| Sbjct 64 AA-TATAAATTAGATAGATTTTATAATGTTGATAAAAAATTTTTTTTAAAAGATTTAACA 122 Query 1309 gattttatttatgcttttGCTGTAAAATATAAGATGTTTGATGTATCGAAAGAAATTGTG 1368 ||||||| ||| | | || ||||||| |||| ||| | |||||| || Sbjct 123 AATTTTATGTATACACATTTTGAAAAATAT--GATGGCACTGGTAAAGTAAGAAAAA-TG 179 Query 1369 GAAAATGTTGACCGCTATAAAGAAAATCATTATCCAAGAGTTAAGTTAAAACAAGATAAT 1428 || | || ||| || |||| ||| | ||| || || || ||||| ||| Sbjct 180 AAACA----GAG---TATTAA--AAAT--TTAGAGCA-AGTAAAATTTAATCAAGACAAT 227 Query 1429 TGAAAATTAATTACTGATTATAATTGACTTAAAGATAATTTTGATAATAAATATTATTTT 1488 |||||||||||| ||||||||||| | || |||| ||||||||| ||||||| Sbjct 228 TGAAAATTAATTGATGATTATAATTCATTTGTTTTTAATAAAAATAATAAATTTTATTTT 287 Query 1489 GTAATTTGGAAACAATCTTATAGTAAAGAATGAGAAATAATGAAATTTAAACATAATATG 1548 | ||| ||| | | |||||||| ||||| ||||| | |||||||||||||||| Sbjct 288 TTTGTTTTTCAACTTTTTAATAGTAAACAATGAAAAATATTAAAATTTAAACATAATACA 347 Query 1549 CGTTATGATATGAAAATAGA------------------AAGTTACATTAAAAATAATTCT 1590 || || || ||||||| ||| | || ||| | || || Sbjct 348 GATTTTGCTAAACAAATAGATGGTATTTCTTTTATTCCTAGTGATATAAAAGTTTATGCT 407 Query 1591 ------------TTTAAAGGTCTTTATCGTTGAGATGGTGATGGTGAACCACAAACACCT 1638 ||||||||||||||||||||||||||| | | |||||| || || Sbjct 408 GAAGCAAATAAATTTAAAGGTCTTTATCGTTGAGATGGTAACAGCGAACCAACAATTCCA 467 Query 1639 ACTATCGACAAAAACACTGGTGAAATTACTGATTGAAATAGTTATCAACAAAGTCGTGTA 1698 || || | ||||||||||| ||||| ||||||||| | | ||| || || | Sbjct 468 ACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-ATTTAGTAATGAA-------A 519 Query 1699 AAACAGTTTATTGATTTATCTTTATATTCTGTTTTGCAAGAAAATATTAGAGTTCAGCAA 1758 || ||| |||| ||| | || ||| | ||||||||||||||| || ||| Sbjct 520 TAAATTTTTTTTGAAATAT-TACTGATGAAGTTATAAGAGAAAATATTAGAGTGCAACAA 578 Query 1759 GGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGAT 1818 |||||||||||| ||||||||||| | || ||||||| | |||||||||||| Sbjct 579 GGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAACACAAAAAATAATTTTTGAT 638 Query 1819 TTTGA 1823 ||||| Sbjct 639 TTTGA 643 >seq70930 Length=3022 Score = 129 bits (142), Expect = 3e-26 Identities = 212/303 (70%), Gaps = 8/303 (3%) Strand=Plus/Minus Query 2666 AAAAAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAG 2725 ||||||| ||||| | || | || || |||||||||||||| |||||||||||| ||| Sbjct 1743 AAAAAGAAAATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAATTGAAAAG 1684 Query 2726 AAATTAATAATGGTGGGTTGTTCCCCGATAA--ACAATGATGACAA-GTGCAATATGTAA 2782 | | | || | || ||| | | | ||||||||| | ||| || || Sbjct 1683 ATTTAACTAGTCTTG--TTGACAAACCAACAGGACAATGATGNNNNNGAACAAATTGAAA 1626 Query 2783 CGCCAAAGGGTTGATGAGATTTTGGTGCTCATATTAAAAATGCGGTGATTTGAATTGTCA 2842 || |||| ||| | | | |||||| ||||||| || |||||||| | Sbjct 1625 ATTGTAAA---TGATACGATATGGTTTGTCATATCAAAAATGGTACCATATGAATTGTTA 1569 Query 2843 ATACTATTCCCGGTGTTAAACAAGTTAATGAATTAGCGAGTGGTGTTGGTAAGGTTTTTG 2902 ||| ||| || ||||||||||||| || || ||||| ||||| |||||||| | ||| Sbjct 1568 ATAATATCCCTGGTGTTAAACAAGCAAACGAGTTAGCCAGTGGAGTTGGTAAATTATTTC 1509 Query 2903 AAACAGTATATAGtttttttAGTCAAATATTTGAAGTATGAAAATTTAATCCAGCATTGT 2962 |||| ||||| ||||||| |||| ||||||| |||||||||||||| || || | Sbjct 1508 AAACGACATATAATTTTTTTGCACAAACATTTGAAATATGAAAATTTAATTTAGATTTTT 1449 Query 2963 ATA 2965 ||| Sbjct 1448 ATA 1446 >seq65094 Length=3539 Score = 105 bits (116), Expect = 4e-19 Identities = 181/268 (68%), Gaps = 22/268 (8%) Strand=Plus/Minus Query 2886 TGTTGGTAAGGTTTTTGAAACAGTATATAGtttttttAGTCAAATATTTGAAGTATGAAA 2945 |||||||||| | ||| ||||| ||||| ||||||| ||||| |||||| ||||||| Sbjct 2668 TGTTGGTAAGTTATTTCAAACAACATATAATTTTTTTGCTCAAACATTTGAGATATGAAA 2609 Query 2946 ATTTAATCCAGCATTGTATAGTACAATAACAAATATTTTNNNNNNNNNNNNNTTTATGAA 3005 ||||||| || || |||| | || ||||||| || |||||||| Sbjct 2608 ATTTAATTTAGATTTTTATATTGTTATTACAAATACATTTTTATTAATTATATTTATGAA 2549 Query 3006 ATTTGTGCGATTAATATAAAAAAGGA------------ACTGTTATTAAG-TTCCTTTTT 3052 |||| | ||| | | ||||||| || | | ||||| || || ||||| Sbjct 2548 ATTTATTCGAATGTTTTAAAAAAAGAAAAAAATAATCTAATTTTATTTAGATTATTTTTT 2489 Query 3053 GTTCTTTTCAGTCAGTAATTTTACCAGTATTTTTGTCAATAGTTGGTAATTGTAAATTCG 3112 ||| ||| ||| ||||||| |||||| | ||||| |||||||| ||| | Sbjct 2488 ATTCATTTTAGTTTGTAATTTCACCAGTGTCTTTGTTGATAGTTGG----TGTTA----- 2438 Query 3113 TAGGTTCATTATTTAATTCTCATTTATA 3140 | ||||||||||| || ||||| ||| Sbjct 2437 TTGGTTCATTATTGTTTTGTCATTGATA 2410 >seq62271 Length=1728 Score = 105 bits (116), Expect = 4e-19 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 2629 CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAAAAGAGAATGATATGTACCGA 2688 |||||| | | ||| |||||||||||||||||| |||||||| ||||| | |||| Sbjct 22 CAAAAAGTAGCGTATTGTGTTTTTGAATTGCAAGCTCAAAAAGAAAATGAATTTTACCAT 81 Query 2689 TATTATGATTTTAATTTTGGGATTTATAATTGACAAGA 2726 |||||||||||||||||||| ||||| |||||| |||| Sbjct 82 TATTATGATTTTAATTTTGGAATTTACAATTGAAAAGA 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26334452965276