Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_003793.1 Length=7768 Score E Sequences producing significant alignments: (Bits) Value seq10155 378 4e-101 seq4052 311 4e-81 seq68896 219 2e-53 seq13494 210 1e-50 seq14856 208 4e-50 seq65094 165 4e-37 seq70930 161 5e-36 seq62271 105 3e-19 >seq10155 Length=2122 Score = 378 bits (418), Expect = 4e-101 Identities = 557/780 (71%), Gaps = 24/780 (3%) Strand=Plus/Minus Query 2490 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2547 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 762 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 705 Query 2548 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2607 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 704 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 645 Query 2608 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2667 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 644 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 585 Query 2668 TCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2727 || ||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 584 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 525 Query 2728 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAAT 2787 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 524 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAAA 468 Query 2788 ATTAGTTTAAATTCGGGTTATGTTTTTGGCGGTGATTTACAAAATAAATATGGTTTGCAA 2847 ||| | || |||||| | |||| | | |||| ||||| || | | Sbjct 467 GTTAATGAGAAAGAAGGTTATTTGTTTGAAGAT------AAAAAGCAATATTCATTACGA 414 Query 2848 TATaaaaaaaTTGAAGAA--CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAA 2905 | ||| ||| | || |||||| | || ||| |||||||||||| |||||||||| Sbjct 413 GTT--AAAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCACAAA 356 Query 2906 AAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGAAA 2965 |||| ||||| | || | || || |||||||||||||| |||||||| ||| |||| Sbjct 355 AAGAAAATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAACTGAAAAGATT 296 Query 2966 TTAATAATGGTGGGTTG--TTCCCCGATAAACAATGATGACAAGTGCAATATATAACTCC 3023 | | || | | ||||| || | || |||||| | ||| | || | Sbjct 295 TAACTA--GTTTGGTTGACAAACCAGCAGGTCAGTGATGAAGCGAACAAATTGAAAATTG 238 Query 3024 TAAAGGTTGATGAGATTTTGGCGCTCATATTAAAAATGCGGTGATTTGAATTGTCAACAC 3083 |||| |||| ||| | | |||||| ||||||| || |||||||| || | Sbjct 237 TAAA---TGATACGATATGGTTTGTCATATCAAAAATGGTACCATATGAATTGTTAATAA 181 Query 3084 TATTCCTGGTGTTAAACAAGTTAATGAATTAGCGAGTGGTGTTGGTAAGGTTTTTGAAAC 3143 ||| |||||||||||||||| || || ||||| ||||| |||||||| | ||| |||| Sbjct 180 TATCCCTGGTGTTAAACAAGCAAACGAGTTAGCCAGTGGAGTTGGTAAATTATTTCAAAC 121 Query 3144 AGTATATAGtttttttAGTCAAATATTTGAGGTATGGAAATTTAATCCAGCATTGTATAG 3203 ||||| ||||||| ||||| |||||| |||| ||||| ||| || || |||| Sbjct 120 GACATATAATTTTTTTGCTCAAACATTTGAAATATGAAAATTCAATTTAGATTTTTATAT 61 Query 3204 TACAATAACAAATATCTTTTTATTAATTATTTTTATGAAATTTGTACGATTAATATaaaa 3263 | || || ||||| |||||||||||| | |||||||||||| | ||| | | ||||| Sbjct 60 TGTCATTACTAATATATTTTTATTAATTGTATTTATGAAATTTATTCGAATGTTTTAAAA 1 Score = 210 bits (232), Expect = 1e-50 Identities = 235/307 (77%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 1234 AAACAAGAAAGTAGTACTGGTAAAGGTATTAATGAAACTGATTTTATTAATACAATGTTT 1293 ||| || ||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct 2099 AAAAAACGAAGTACTAATTTTAAA---ATTAATGAAGAAGATTTTATTAATACAATGTTT 2043 Query 1294 TTACGCAGTAGtttttttGAAAATTGATCGGAAACAAATTATTTTATTAATCCAACTTTA 1353 || || ||||||||||||||||||||| || |||||||||||| |||| ||||||||| Sbjct 2042 TTGCGAAGTAGTTTTTTTGAAAATTGAAGTGATACAAATTATTTTGTTAACCCAACTTTA 1983 Query 1354 AAAACATCAAAAAATTTATTGTTTAATGATAAATGGTATTTGGATTTTTTACAAGATAGT 1413 ||||||||||| ||| | |||||| || || ||| | ||||||||| |||| ||| Sbjct 1982 AAAACATCAAAGTTATTAACTTATAATGAAAATTGATATCTAGATTTTTTAAAAGACAGT 1923 Query 1414 TATTCAACTGGAGTTGTTTATGATAAACCTAATGAAGTATTTTT-GAATTATTATCAACA 1472 ||| ||||||| |||| | ||||||||||| ||| |||||| |||||| ||| || | Sbjct 1922 TATGCAACTGGGATTGTGTTTGATAAACCTAGTGATAAATTTTTAGAATTA-TATAAAAA 1864 Query 1473 ATGACAT-AGTTTAAAAAATCGGTATATGGTTGAAAAATTTTATGATGTTAAAAAAGAGA 1531 ||| || ||| | || | |||| | || | ||||||| ||||| | || | | Sbjct 1863 TTGAGATAAGTATGTGCAA-CAATATAAATTAGATAGATTTTATAATGTTGATAA--AAA 1807 Query 1532 Atttttt 1538 ||||||| Sbjct 1806 ATTTTTT 1800 Score = 93.3 bits (102), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 11/213 (5%) Strand=Plus/Minus Query 1862 AACCA-CAATTACCAACCATTGATAAAAACACTGGTGAAATTACTGATTGAAATAGTTAT 1920 ||||| ||||| ||||| || ||||||||||||| ||||| ||||||||| | | ||| Sbjct 1453 AACCAACAATT-CCAACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-ATTTAG 1396 Query 1921 CAACAAACTCGCGTAAAAGAATTTATTGATTTATCTTTATATTCTGTTTTGCTAGAAAAT 1980 || || | || ||| |||| ||| | || ||| | ||||||| Sbjct 1395 TAATGAAAT-------AAATTTTTTTTGAAATATTACTG-ATGAAGTTATAAGAGAAAAT 1344 Query 1981 ACTAGGGTTCAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAG 2040 | ||| || || ||||||||||||||| ||||||||||| | || ||||||| | Sbjct 1343 ATTAGAGTGCAACAAGGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAACACAA 1284 Query 2041 CGGATAATTTTTGATTTTGAGACGGTTGATGAA 2073 ||||||||||||||||| | |||||||| Sbjct 1283 AAAATAATTTTTGATTTTGAAATTATTGATGAA 1251 >seq4052 Length=3016 Score = 311 bits (344), Expect = 4e-81 Identities = 484/678 (71%), Gaps = 28/678 (4%) Strand=Plus/Plus Query 2490 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2547 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 918 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 975 Query 2548 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2607 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 976 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 1035 Query 2608 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2667 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 1036 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 1095 Query 2668 TCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2727 || ||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 1096 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 1155 Query 2728 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAAT 2787 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 1156 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAAA 1212 Query 2788 ATTAGTTTAAATTCGGGTTATGTTTTTGGCGGTGATTTACAAAATAAATATGGTTTGCAA 2847 ||| | || |||||| | |||| | | |||| ||||| |||| | Sbjct 1213 GTTAATGAGAAAGAAGGTTATTTGTTTGAAGAT------AAAAAGCAATATCCATTGCGA 1266 Query 2848 TATaaaaaaaTTGAAGAA--CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAA 2905 | ||| ||| | || |||||| | || ||| |||||||||||| ||||| |||| Sbjct 1267 GTT--AAAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCCCAAA 1324 Query 2906 AAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGAAA 2965 |||| ||||| | |||| ||||| |||||||||||||| ||||| |||||| ||| | Sbjct 1325 AAGAAAATGAATTTTACCATTATTACGATTTTAATTTTGGAATTTACAATTGAAAAG-AT 1383 Query 2966 TTAATAATGGTGGGTTGTTCCCCGATA-AACAATGATGACAAGTGC-AATATATAACTCC 3023 |||| | | | | || | | ||||||||| | | ||| | |||| Sbjct 1384 TTAACTAGTCTAGTTGACAAACCAACAGGACAATGATGGAGCGAACAAATTGAAAACT-G 1442 Query 3024 TAAAGGTTGATGAGAT--TTTGGCGCTCATATTAAAAATGCGGTGATTTGAATTGTCAAC 3081 ||| | | |||| || |||| |||| | ||||||| | || |||||||| || Sbjct 1443 TAAGTGAT-ATGATATGGTTTG----TCATTTAAAAAATGGTGCCATATGAATTGTAAAT 1497 Query 3082 ACTATTCCTGGTGTTAAACAAGTTAATGAATTAGCGAGTGGTGTTGGTAAGGTTTTTGAA 3141 | ||| || ||||||||||||| || || ||||||||||| || ||||| | ||| || Sbjct 1498 AATATACCAGGTGTTAAACAAGCAAACGAGTTAGCGAGTGGAGTAGGTAAATTATTTCAA 1557 Query 3142 ACAGTATATAGttttttt 3159 || ||||| ||||||| Sbjct 1558 ACGACATATAATTTTTTT 1575 Score = 93.3 bits (102), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 11/213 (5%) Strand=Plus/Plus Query 1862 AACCA-CAATTACCAACCATTGATAAAAACACTGGTGAAATTACTGATTGAAATAGTTAT 1920 ||||| ||||| ||||| || ||||||||||||| ||||| ||||||||| | | ||| Sbjct 227 AACCAACAATT-CCAACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-ATTTAG 284 Query 1921 CAACAAACTCGCGTAAAAGAATTTATTGATTTATCTTTATATTCTGTTTTGCTAGAAAAT 1980 || || | || ||| |||| ||| | || ||| | ||||||| Sbjct 285 TAATGAAAT-------AAATTTTTTTTGAAATATTACTG-ATGAAGTTATAAGAGAAAAT 336 Query 1981 ACTAGGGTTCAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAG 2040 | ||| || || ||||||||||||||| ||||||||||| | || ||||||| | Sbjct 337 ATTAGAGTGCAACAAGGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAACACAA 396 Query 2041 CGGATAATTTTTGATTTTGAGACGGTTGATGAA 2073 ||||||||||||||||| | |||||||| Sbjct 397 AAAATAATTTTTGATTTTGAAATTATTGATGAA 429 >seq68896 Length=2876 Score = 219 bits (242), Expect = 2e-53 Identities = 364/525 (69%), Gaps = 56/525 (11%) Strand=Plus/Minus Query 2490 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2547 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 617 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 560 Query 2548 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2607 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 559 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 500 Query 2608 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2667 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 499 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 440 Query 2668 TCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2727 || ||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 439 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 380 Query 2728 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAAT 2787 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 379 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAAA 323 Query 2788 ATTAGTTTAAATTCGGGTTATGTTTTTG----------------------GCG-GT---- 2820 ||| | || |||||| | |||| ||| || Sbjct 322 GTTAATGAGAAAGAAGGTTATTTGTTTGAAGATAAAAAGCAATATCCATTGCGAGTTAAA 263 Query 2821 GATTTA-CAA---AATAAATATGGT------TTGCAATAT----------aaaaaaaTTG 2860 |||||| ||| || || || ||| || ||||| ||| ||| Sbjct 262 GATTTATCAATTCAAAAAGTAGGGTATGGTGTTTNAATATTCATTACGAGTTAAAGATTT 203 Query 2861 AAGAA--CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAAAAGAGAATGATAT 2918 | || |||||| | || ||| |||||||||||| |||||||||||||| ||||| | Sbjct 202 ATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCACAAAAAGAAAATGAGTT 143 Query 2919 GTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGA 2963 || | || || |||||||||||||| |||||||| ||| |||| Sbjct 142 TTATCATTACTACGATTTTAATTTTGGAATTTATAACTGAAAAGA 98 Score = 172 bits (190), Expect = 3e-39 Identities = 185/245 (76%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 618 AAGTAATGATTAAATTAGTTTTATTGGTGGCGGCGATTGCGATATTTGGTACTGGTTTTA 677 |||||||||||||||| || ||||| || | |||| | ||||| ||||| || || |||| Sbjct 2375 AAGTAATGATTAAATTGGTGTTATTAGTTGTGGCGGTGGCGATTTTTGGAACCGGATTTA 2316 Query 678 TTACTGTTATTATTAATCAATTTACATCAGCTAAAAATATTATTATGGATTTATATAATT 737 | || ||| ||||||||||||| | ||| | ||||||||||||| ||||||||| || Sbjct 2315 TAACAGTTCTTATTAATCAATTGTCTGGAGCCACAAATATTATTATGAATTTATATAGTT 2256 Query 738 CTGATACTTGGTTGATTTGATTATTTGGTAGAATGGCAGTTTTGTTTAGTCATCCGTTAA 797 | || ||| ||| | | | |||||| |||||||||| ||| ||| | | Sbjct 2255 CGAATGATTGATTGTTAAAAGCAATTGGTAAGTTGGCAGTTTTATTTTCGCATGAAGTGA 2196 Query 798 TGTTAACGATATCAAGTTTATATATTGTTGGGTTTATTGTTTCAAAAACATTGTATAGCT 857 || ||| | ||| | | ||||||||||| |||||| ||||||||||||| ||||| | Sbjct 2195 TGCAAACTGTTTCAGGAATTTATATTGTTGGATTTATTATTTCAAAAACATTATATAGTT 2136 Query 858 AGGAG 862 ||||| Sbjct 2135 AGGAG 2131 Score = 167 bits (184), Expect = 1e-37 Identities = 159/203 (78%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 36 TTGCTAATAAGTATGATAGTGAATGGTTAAAGTTTGTACGTGATTTAAAGAATGATGAAA 95 |||||||||| ||||||||| | || ||| ||||| ||||||||||| |||||||||| Sbjct 2876 TTGCTAATAAATATGATAGTTATTGATTATCATTTGTTCGTGATTTAAAAAATGATGAAA 2817 Query 96 TTGTTAATGAAAAATTTTATTATTGATCGGAAATCACAAAATTAAGTGTTAAAGAACGAT 155 ||| ||| ||| | |||| |||| | || || | ||||| | | ||||||||| | Sbjct 2816 TTGAAAATAAAACAGAATATTTTTGAACTGATATTGCTAAATTGACTAATAAAGAACGCT 2757 Query 156 TGGAGTTATTTGATATTGATATTTTGAAAAAGAATTTAAAACCTAGAA---AAGAGAAAG 212 | || |||||||| ||||||||||||||||| ||||||||||| | || || |||||| Sbjct 2756 TAGAATTATTTGACATTGATATTTTGAAAAATAATTTAAAACCAAAAACAGAAAAGAAAG 2697 Query 213 GAAATGGTAAAGATGATTAATTT 235 |||| | |||||||||||| Sbjct 2696 GAAAAAAAGATGATGATTAATTT 2674 Score = 98.7 bits (108), Expect = 5e-17 Identities = 182/264 (69%), Gaps = 11/264 (4%) Strand=Plus/Minus Query 1814 TTTATTTATCTAGTTATAAAGCAATTTACCGTTGAACTGGCGTTGGTAAACCACAATTAC 1873 |||||| || | |||| | | |||| ||||| ||| | ||| |||||||| || Sbjct 1409 TTTATTCATATTATTATGATAAAGTTTATTGTTGAGATGGTGGGGGTCAACCACAAACAC 1350 Query 1874 CAACCATTGATAAAAACACTGGTGAAATTACTGATTGAAATAG----TTATCAACAAACT 1929 || ||||||| || |||| | ||| | || |||||| |||| |||||| Sbjct 1349 CACAGATTGATACCAA---TGGTAATGTTAA-GTTTAAAATAGATATTTATAAACAAAAA 1294 Query 1930 CGCGTAAAAGAATTTATTGATTTATCTTTATATTCTGTTTTGCTAGAAAATACTAGGGTT 1989 || ||||| ||| | || || |||| || | || | | |||||||| ||| || Sbjct 1293 ---GTTAAAGATTTTTTAAATGAATATTTAGATATTATTATTCAAGAAAATATTAGAGTG 1237 Query 1990 CAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATT 2049 || ||||||||| ||||| ||||||||||| || | ||||||| | |||||| Sbjct 1236 CAACAAGGTGGTGGTGCGAATTATGAAAATTTAGATCAACATGGAACACAAAAAATAATT 1177 Query 2050 TTTGATTTTGAGACGGTTGATGAA 2073 ||||||||||| | |||||||| Sbjct 1176 TTTGATTTTGAAATTATTGATGAA 1153 >seq13494 Length=2212 Score = 210 bits (232), Expect = 1e-50 Identities = 235/307 (77%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 1234 AAACAAGAAAGTAGTACTGGTAAAGGTATTAATGAAACTGATTTTATTAATACAATGTTT 1293 ||| || ||||| || | |||| ||||||||| ||||||||||||||||||||| Sbjct 1151 AAAAAACGAAGTACTAATTTTAAA---ATTAATGAAGAAGATTTTATTAATACAATGTTT 1095 Query 1294 TTACGCAGTAGtttttttGAAAATTGATCGGAAACAAATTATTTTATTAATCCAACTTTA 1353 || || ||||||||||||||||||||| || |||||||||||| |||| ||||||||| Sbjct 1094 TTGCGAAGTAGTTTTTTTGAAAATTGAAGTGATACAAATTATTTTGTTAACCCAACTTTA 1035 Query 1354 AAAACATCAAAAAATTTATTGTTTAATGATAAATGGTATTTGGATTTTTTACAAGATAGT 1413 ||||||||||| ||| | |||||| || || ||| | ||||||||| |||| ||| Sbjct 1034 AAAACATCAAAGTTATTAACTTATAATGAAAATTGATATCTAGATTTTTTAAAAGACAGT 975 Query 1414 TATTCAACTGGAGTTGTTTATGATAAACCTAATGAAGTATTTTT-GAATTATTATCAACA 1472 ||| ||||||| |||| | ||||||||||| ||| |||||| |||||| ||| || | Sbjct 974 TATGCAACTGGGATTGTGTTTGATAAACCTAGTGATAAATTTTTAGAATTA-TATAAAAA 916 Query 1473 ATGACAT-AGTTTAAAAAATCGGTATATGGTTGAAAAATTTTATGATGTTAAAAAAGAGA 1531 ||| || ||| | || | |||| | || | ||||||| ||||| | || | | Sbjct 915 TTGAGATAAGTATGTGCAA-CAATATAAATTAGATAGATTTTATAATGTTGATAA--AAA 859 Query 1532 Atttttt 1538 ||||||| Sbjct 858 ATTTTTT 852 Score = 145 bits (160), Expect = 4e-31 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 635 GTTTTATTGGTGGCGGCGATTGCGATATTTGGTACTGGTTTTATTACTGTTATTATTAAT 694 || ||||| || | |||| | ||||| ||||| || || ||||| || ||| |||||||| Sbjct 1502 GTGTTATTAGTTGTGGCGGTGGCGATTTTTGGAACCGGATTTATAACAGTTCTTATTAAT 1443 Query 695 CAATTTACATCAGCTAAAAATATTATTATGGATTTATATAATTCTGATACTTGGTTGATT 754 ||||| | ||| | ||||||||||||| ||||||||| ||| || ||| ||| | Sbjct 1442 CAATTGTCTGGAGCCACAAATATTATTATGAATTTATATAGTTCGAATGATTGATTGTTA 1383 Query 755 TGATTATTTGGTAGAATGGCAGTTTTGTTTAGTCATCCGTTAATGTTAACGATATCAAGT 814 | | |||||| |||||||||| ||| ||| | ||| ||| | ||| | Sbjct 1382 AAAGCAATTGGTAAGTTGGCAGTTTTATTTTCGCATGAAGTGATGCAAACTGTTTCAGGA 1323 Query 815 TTATATATTGTTGGGTTTATTGTTTCAAAAACATTGTATAGCTAGGAG 862 | ||||||||||| |||||| ||||||||||||| ||||| |||||| Sbjct 1322 ATTTATATTGTTGGATTTATTATTTCAAAAACATTATATAGTTAGGAG 1275 Score = 93.3 bits (102), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 11/213 (5%) Strand=Plus/Minus Query 1862 AACCA-CAATTACCAACCATTGATAAAAACACTGGTGAAATTACTGATTGAAATAGTTAT 1920 ||||| ||||| ||||| || ||||||||||||| ||||| ||||||||| | | ||| Sbjct 505 AACCAACAATT-CCAACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-ATTTAG 448 Query 1921 CAACAAACTCGCGTAAAAGAATTTATTGATTTATCTTTATATTCTGTTTTGCTAGAAAAT 1980 || || | || ||| |||| ||| | || ||| | ||||||| Sbjct 447 TAATGAAAT-------AAATTTTTTTTGAAATATTACTG-ATGAAGTTATAAGAGAAAAT 396 Query 1981 ACTAGGGTTCAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAG 2040 | ||| || || ||||||||||||||| ||||||||||| | || ||||||| | Sbjct 395 ATTAGAGTGCAACAAGGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAACACAA 336 Query 2041 CGGATAATTTTTGATTTTGAGACGGTTGATGAA 2073 ||||||||||||||||| | |||||||| Sbjct 335 AAAATAATTTTTGATTTTGAAATTATTGATGAA 303 >seq14856 Length=1519 Score = 208 bits (230), Expect = 4e-50 Identities = 228/299 (76%), Gaps = 7/299 (2%) Strand=Plus/Plus Query 2490 TAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGAAATTTTAT 2547 ||||||| ||| || ||| |||| |||||||| ||||| ||| | || |||||| Sbjct 1145 TAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATAACTTTTAT 1202 Query 2548 ACTAATTATTTACGTACGATTTTTGATTTAGAAAATAATACTTATGTTCAAGGTTATAAT 2607 | ||||||||||| || ||||||||||||||| | ||||| ||||||| ||| || Sbjct 1203 AAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAGGGTATCAT 1262 Query 2608 AAAAAATATGGTTTGTTAGTAAATAATGGTTTTAAAATTTACCCACGATATTTTTATTTT 2667 ||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||| Sbjct 1263 AAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATTTTTATTTT 1322 Query 2668 TCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATCGGTTTTAT 2727 || ||||| ||| || | |||||| | ||| | ||||| || ||| |||||| Sbjct 1323 TCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATAAATTTTAT 1382 Query 2728 ACGATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATAATTATAA 2786 | | | || ||||| | |||||||||| ||||| ||||||| |||||||| ||| Sbjct 1383 -CAA--ACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATAATTTTAA 1438 Score = 93.3 bits (102), Expect = 2e-15 Identities = 151/213 (71%), Gaps = 11/213 (5%) Strand=Plus/Plus Query 1862 AACCA-CAATTACCAACCATTGATAAAAACACTGGTGAAATTACTGATTGAAATAGTTAT 1920 ||||| ||||| ||||| || ||||||||||||| ||||| ||||||||| | | ||| Sbjct 454 AACCAACAATT-CCAACAATAAATAAAAACACTGGCGAAATAACTGATTGACA-ATTTAG 511 Query 1921 CAACAAACTCGCGTAAAAGAATTTATTGATTTATCTTTATATTCTGTTTTGCTAGAAAAT 1980 || || | || ||| |||| ||| | || ||| | ||||||| Sbjct 512 TAATGAAAT-------AAATTTTTTTTGAAATATTACTG-ATGAAGTTATAAGAGAAAAT 563 Query 1981 ACTAGGGTTCAGCAAGGTGGTAGTGCGGATTATGAAAATCCGAATAAGGTTGGAACAAAG 2040 | ||| || || ||||||||||||||| ||||||||||| | || ||||||| | Sbjct 564 ATTAGAGTGCAACAAGGTGGTAGTGCGAATTATGAAAATTTAGACCAGCATGGAACACAA 623 Query 2041 CGGATAATTTTTGATTTTGAGACGGTTGATGAA 2073 ||||||||||||||||| | |||||||| Sbjct 624 AAAATAATTTTTGATTTTGAAATTATTGATGAA 656 >seq65094 Length=3539 Score = 165 bits (182), Expect = 4e-37 Identities = 178/237 (75%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 3123 TGTTGGTAAGGTTTTTGAAACAGTATATAGtttttttAGTCAAATATTTGAGGTATGGAA 3182 |||||||||| | ||| ||||| ||||| ||||||| ||||| ||||||| |||| || Sbjct 2668 TGTTGGTAAGTTATTTCAAACAACATATAATTTTTTTGCTCAAACATTTGAGATATGAAA 2609 Query 3183 ATTTAATCCAGCATTGTATAGTACAATAACAAATATCTTTTTATTAATTATTTTTATGAA 3242 ||||||| || || |||| | || ||||||| |||||||||||||| |||||||| Sbjct 2608 ATTTAATTTAGATTTTTATATTGTTATTACAAATACATTTTTATTAATTATATTTATGAA 2549 Query 3243 ATTTGTACGATTAATATaaaaaaaGGAA--------CTGTTATTAATTAAGTTCCTTTTT 3294 |||| | ||| | | ||||||||| || || | ||| ||| || ||||| Sbjct 2548 ATTTATTCGAATGTTTTAAAAAAAGAAAAAAATAATCTAATTTTATTTAGATTATTTTTT 2489 Query 3295 GTTCTTTTCAATCAGTAATTTCACCAGTATTTTTGTCGATAGTTGGTATTTGTGGTT 3351 ||| ||| | | |||||||||||||| | ||||| |||||||||| || ||||| Sbjct 2488 ATTCATTTTAGTTTGTAATTTCACCAGTGTCTTTGTTGATAGTTGGTGTTATTGGTT 2432 >seq70930 Length=3022 Score = 161 bits (178), Expect = 5e-36 Identities = 269/385 (70%), Gaps = 9/385 (2%) Strand=Plus/Minus Query 2903 AAAAAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAG 2962 ||||||| ||||| | || | || || |||||||||||||| |||||||||||| ||| Sbjct 1743 AAAAAGAAAATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAATTGAAAAG 1684 Query 2963 AAATTAATAATGGTGGGTTGTTCCCCGATAA--ACAATGATGACAA-GTGCAATATATAA 3019 | | | || | || ||| | | | ||||||||| | ||| | || Sbjct 1683 ATTTAACTAGTCTTG--TTGACAAACCAACAGGACAATGATGNNNNNGAACAAATTGAAA 1626 Query 3020 CTCCTAAAGGTTGATGAGATTTTGGCGCTCATATTAAAAATGCGGTGATTTGAATTGTCA 3079 | |||| |||| ||| | | |||||| ||||||| || |||||||| | Sbjct 1625 ATTGTAAA---TGATACGATATGGTTTGTCATATCAAAAATGGTACCATATGAATTGTTA 1569 Query 3080 ACACTATTCCTGGTGTTAAACAAGTTAATGAATTAGCGAGTGGTGTTGGTAAGGTTTTTG 3139 | | ||| |||||||||||||||| || || ||||| ||||| |||||||| | ||| Sbjct 1568 ATAATATCCCTGGTGTTAAACAAGCAAACGAGTTAGCCAGTGGAGTTGGTAAATTATTTC 1509 Query 3140 AAACAGTATATAGtttttttAGTCAAATATTTGAGGTATGGAAATTTAATCCAGCATTGT 3199 |||| ||||| ||||||| |||| |||||| |||| ||||||||| || || | Sbjct 1508 AAACGACATATAATTTTTTTGCACAAACATTTGAAATATGAAAATTTAATTTAGATTTTT 1449 Query 3200 ATAGTACAATAACAAATATCTTTTTATTAATTATTTTTATGAAATTTGTACGATTAATAT 3259 ||| | || || |||| |||||||||||| | |||||||||||| | || | | | Sbjct 1448 ATATTGTCATTACGAATACATTTTTATTAATTGTGTTTATGAAATTTATCAGAATGTTTT 1389 Query 3260 aaaaaaaGGAACTGTTATTAATTAA 3284 ||||| | || | | ||| ||||| Sbjct 1388 AAAAATA-AAAATATAATTTATTAA 1365 >seq62271 Length=1728 Score = 105 bits (116), Expect = 3e-19 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 2866 CAAAAAATCGGTTATAATGTTTTTGAATTGCAAGCACAAAAAGAGAATGATATGTACCGA 2925 |||||| | | ||| |||||||||||||||||| |||||||| ||||| | |||| Sbjct 22 CAAAAAGTAGCGTATTGTGTTTTTGAATTGCAAGCTCAAAAAGAAAATGAATTTTACCAT 81 Query 2926 TATTATGATTTTAATTTTGGGATTTATAATTGACAAGA 2963 |||||||||||||||||||| ||||| |||||| |||| Sbjct 82 TATTATGATTTTAATTTTGGAATTTACAATTGAAAAGA 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24719921127536