Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_009987.1 Length=7870 Score E Sequences producing significant alignments: (Bits) Value seq10155 381 3e-102 seq4052 316 1e-82 seq13494 279 3e-71 seq68896 224 5e-55 seq14856 210 1e-50 seq70930 170 1e-38 seq65094 132 2e-27 seq62271 111 8e-21 >seq10155 Length=2122 Score = 381 bits (422), Expect = 3e-102 Identities = 568/791 (72%), Gaps = 30/791 (4%) Strand=Plus/Minus Query 5245 ATTAATGATAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGA 5302 ||| || ||||||| ||| || ||| |||| |||||||| ||||| ||| | | Sbjct 770 ATTGATTTTAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATA 713 Query 5303 AATTTTATACTAATTATTTACGAACGATTTTTGATTTAGAAAATAATACTTATGTTCAAG 5362 | ||||||| |||||||||||| || ||||||||||||||| | ||||| |||||| Sbjct 712 ACTTTTATAAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAG 653 Query 5363 GTTATAATAAAAAATATGGTTTATTAGTAAATAATGGTTTTAAAATTTATCCACGATATT 5422 | ||| ||||||||| |||||| ||||||| ||||||||||||||||| |||| |||| Sbjct 652 GGTATCATAAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATT 593 Query 5423 TTTATTTTTCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATC 5482 |||||||||| ||||| ||| || | |||||| | ||| | ||||| || ||| Sbjct 592 TTTATTTTTCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATA 533 Query 5483 GGTTTTATACCATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATA 5542 |||||| || | || ||||| | |||||||||| ||||| ||||||| ||||| Sbjct 532 AATTTTAT--CA-AACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATA 476 Query 5543 ATTATGATATTAAGTTAAATTCAGGTTATGTTTTTGGTGGTGATTTACAATCAAAATATG 5602 ||| | | |||| || ||||||| | |||| | | | || | ||||| Sbjct 475 ATTTTAAAGTTAATGAGAAAGAAGGTTATTTGTTTGAAG----ATAAAAAGC--AATATT 422 Query 5603 GTTTACAATACAAGAAAATTGAAGAA--CAAAAAATCGGTTACAATGTTTTTGAATTGCA 5660 |||| | | || ||| | || |||||| | || || |||||||||||| || Sbjct 421 CATTACGAGTTA--AAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACA 364 Query 5661 AGCTCAAAAAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTG 5720 ||| |||||||| ||||| | || | || || |||||||||||||| |||||||| || Sbjct 363 AGCACAAAAAGAAAATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAACTG 304 Query 5721 ACAAGAGATAAATAGTGGTGGTTTA-TTTCCTGATAAGCAATGATGACAAGTACAATATG 5779 | |||| ||| |||| ||||| | || | || |||||| | |||| || Sbjct 303 AAAAGATTTAACTAGT-TTGGTTGACAAACCAGCAGGTCAGTGATGAAGCGAACAAATTG 245 Query 5780 TAACGCCTGAGGGTTGATGATAT--TTTGGTGCTCATATTAAAAATGCCGTA--ATTTGA 5835 || | | | | | ||||| |||| |||||| ||||||| ||| || ||| Sbjct 244 AAAATTGTAAATGAT-ACGATATGGTTTG----TCATATCAAAAATG--GTACCATATGA 192 Query 5836 ATTGTTAATACTATTCCGGGAGTTAAGCAAGTTAACGAGTTAGCGAGTGGTGTTGGCAAG 5895 |||||||||| ||| || || ||||| |||| ||||||||||| ||||| ||||| || Sbjct 191 ATTGTTAATAATATCCCTGGTGTTAAACAAGCAAACGAGTTAGCCAGTGGAGTTGGTAAA 132 Query 5896 GTTTTTGAGACAGTATATAGtttttttAGTCAAATATTCGAAGTATGAAAATTTAATCCA 5955 | ||| | || ||||| ||||||| ||||| ||| ||| |||||||||| ||| | Sbjct 131 TTATTTCAAACGACATATAATTTTTTTGCTCAAACATTTGAAATATGAAAATTCAATTTA 72 Query 5956 GCATTGTATAATACAATAACAAATATCTTTTTATTAATTATCTTTATGAAATTTGTACGA 6015 | || |||| | || || ||||| |||||||||||| | |||||||||||| | ||| Sbjct 71 GATTTTTATATTGTCATTACTAATATATTTTTATTAATTGTATTTATGAAATTTATTCGA 12 Query 6016 TTAATATAAAA 6026 | | ||||| Sbjct 11 ATGTTTTAAAA 1 Score = 201 bits (222), Expect = 6e-48 Identities = 218/283 (77%), Gaps = 12/283 (4%) Strand=Plus/Minus Query 3979 ATTAATGAAACTGATTTTATTAATACAATGTTTTTACGCAGCAGtttttttGAAAATTGG 4038 ||||||||| ||||||||||||||||||||||| || || ||||||||||||||||| Sbjct 2075 ATTAATGAAGAAGATTTTATTAATACAATGTTTTTGCGAAGTAGTTTTTTTGAAAATTGA 2016 Query 4039 TCTGAAACAAATTATTTTATTAATCCAACTTTAAAAACATCaaaaaaaTTATTGTTTAAT 4098 ||| |||||||||||| |||| |||||||||||||||||||| |||| | |||| Sbjct 2015 AGTGATACAAATTATTTTGTTAACCCAACTTTAAAAACATCAAAGTTATTAACTTATAAT 1956 Query 4099 GATAAATGGTATTTGGATTTTTTACAAGATAGTTATTCAACAGGAGTTGTTTATGATAAA 4158 || || || ||| | ||||||||| |||| |||||| |||| || |||| | ||||||| Sbjct 1955 GAAAATTGATATCTAGATTTTTTAAAAGACAGTTATGCAACTGGGATTGTGTTTGATAAA 1896 Query 4159 CCAAGTTCATCtttttttag-tttttATCACATGTGAGAT-AGT---TGAAAAAATACAT 4213 || || | || ||||||| || ||| | | |||||| ||| || || |||| | Sbjct 1895 CCTAG-TGATAAATTTTTAGAATTATATAAAAATTGAGATAAGTATGTGCAACAATATAA 1837 Query 4214 ATATGGTTGAAAAATTTTATGATGTTAAAAAGGAAAATTTTTT 4256 || | || | ||||||| ||||| | || |||||||||| Sbjct 1836 AT----TAGATAGATTTTATAATGTTGATAA--AAAATTTTTT 1800 Score = 134 bits (148), Expect = 7e-28 Identities = 178/245 (73%), Gaps = 9/245 (4%) Strand=Plus/Minus Query 4592 TTAAAGGTTTTTATCGTTGAGATGGTGATGGTGAACCTGAAACACCAACTATCAACGAAA 4651 |||||||| ||||||||||||||||| | | ||||| || ||||| || || ||| Sbjct 1486 TTAAAGGTCTTTATCGTTGAGATGGTAACAGCGAACCAACAATTCCAACAATAAATAAAA 1427 Query 4652 ACACCGGTGAAATTACTGATTGAAATACTTATCAACAAAATTTTGTAAAAGAATTTATTG 4711 |||| || ||||| ||||||||| | | ||| || |||| ||| ||| | Sbjct 1426 ACACTGGCGAAATAACTGATTGACA-ATTTAGTAATGAAAT------AAATTTTTTTTGA 1374 Query 4712 ATTATTCTTTAACTGCTGTTTTGCAAGAAAATATTAGAGTTCAACAAGGTGGTAGTGCGG 4771 | |||| | | || ||| | ||||||||||||||| |||||||||||||||||| Sbjct 1373 AATATTACTGA--TGAAGTTATAAGAGAAAATATTAGAGTGCAACAAGGTGGTAGTGCGA 1316 Query 4772 ATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGATTTTGAGACAGTTG 4831 ||||||||||| | || ||||||| | ||||||||||||||||| | ||| Sbjct 1315 ATTATGAAAATTTAGACCAGCATGGAACACAAAAAATAATTTTTGATTTTGAAATTATTG 1256 Query 4832 ATGAA 4836 ||||| Sbjct 1255 ATGAA 1251 Score = 87.8 bits (96), Expect = 9e-14 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 6057 ttttCAATCAGTAATTTTACCGGTGTTTTTGTTGATTGTTGGTAATTGT-GGTTCACCAT 6115 || ||||||||| |||| || |||||||| || |||||||| |||||| ||||| | | Sbjct 1401 TTGTCAATCAGTTATTTCGCCAGTGTTTTTATTTATTGTTGG-AATTGTTGGTTCGCTGT 1459 Query 6116 CACCATCTCAACGATAAAAACCTTTAA 6142 ||||||||||||||||| |||||||| Sbjct 1460 TACCATCTCAACGATAAAGACCTTTAA 1486 >seq4052 Length=3016 Score = 316 bits (350), Expect = 1e-82 Identities = 489/685 (71%), Gaps = 26/685 (4%) Strand=Plus/Plus Query 5245 ATTAATGATAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGA 5302 ||| || ||||||| ||| || ||| |||| |||||||| ||||| ||| | | Sbjct 910 ATTGATTTTAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATA 967 Query 5303 AATTTTATACTAATTATTTACGAACGATTTTTGATTTAGAAAATAATACTTATGTTCAAG 5362 | ||||||| |||||||||||| || ||||||||||||||| | ||||| |||||| Sbjct 968 ACTTTTATAAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAG 1027 Query 5363 GTTATAATAAAAAATATGGTTTATTAGTAAATAATGGTTTTAAAATTTATCCACGATATT 5422 | ||| ||||||||| |||||| ||||||| ||||||||||||||||| |||| |||| Sbjct 1028 GGTATCATAAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATT 1087 Query 5423 TTTATTTTTCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATC 5482 |||||||||| ||||| ||| || | |||||| | ||| | ||||| || ||| Sbjct 1088 TTTATTTTTCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATA 1147 Query 5483 GGTTTTATACCATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATA 5542 |||||| || | || ||||| | |||||||||| ||||| ||||||| ||||| Sbjct 1148 AATTTTAT--CA-AACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATA 1204 Query 5543 ATTATGATATTAAGTTAAATTCAGGTTATGTTTTTGGTGGTGATTTACAATCAAAATATG 5602 ||| | | |||| || ||||||| | |||| | | | || | ||||| Sbjct 1205 ATTTTAAAGTTAATGAGAAAGAAGGTTATTTGTTTGAAG----ATAAAAAGC--AATATC 1258 Query 5603 GTTTACAATACAAGAAAATTGAAGAA--CAAAAAATCGGTTACAATGTTTTTGAATTGCA 5660 || | | | || ||| | || |||||| | || || |||||||||||| || Sbjct 1259 CATTGCGAGTTA--AAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACA 1316 Query 5661 AGCTCAAAAAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTG 5720 ||| |||||||| ||||| | |||| ||||| |||||||||||||| ||||| ||||| Sbjct 1317 AGCCCAAAAAGAAAATGAATTTTACCATTATTACGATTTTAATTTTGGAATTTACAATTG 1376 Query 5721 ACAAGAGATAAATAGTGGTGGTTTATTTCCTGATAAG-CAATGATGACAAGTACAATATG 5779 | |||| ||| |||| | ||| | | | | | |||||||| | |||| || Sbjct 1377 AAAAGATTTAACTAGT-CTAGTTGACAAACCAACAGGACAATGATGGAGCGAACAAATTG 1435 Query 5780 TAACGCCTGAGGGTTGATGATAT--TTTGGTGCTCATATTAAAAATGCCGTAATTTGAAT 5837 || | || | | ||||||| |||| |||| | ||||||| | || ||||| Sbjct 1436 AAAACTGTAAGTGAT-ATGATATGGTTTG----TCATTTAAAAAATGGTGCCATATGAAT 1490 Query 5838 TGTTAATACTATTCCGGGAGTTAAGCAAGTTAACGAGTTAGCGAGTGGTGTTGGCAAGGT 5897 ||| |||| ||| || || ||||| |||| ||||||||||||||||| || || || | Sbjct 1491 TGTAAATAATATACCAGGTGTTAAACAAGCAAACGAGTTAGCGAGTGGAGTAGGTAAATT 1550 Query 5898 TTTTGAGACAGTATATAGttttttt 5922 ||| | || ||||| ||||||| Sbjct 1551 ATTTCAAACGACATATAATTTTTTT 1575 Score = 134 bits (148), Expect = 7e-28 Identities = 178/245 (73%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 4592 TTAAAGGTTTTTATCGTTGAGATGGTGATGGTGAACCTGAAACACCAACTATCAACGAAA 4651 |||||||| ||||||||||||||||| | | ||||| || ||||| || || ||| Sbjct 194 TTAAAGGTCTTTATCGTTGAGATGGTAACAGCGAACCAACAATTCCAACAATAAATAAAA 253 Query 4652 ACACCGGTGAAATTACTGATTGAAATACTTATCAACAAAATTTTGTAAAAGAATTTATTG 4711 |||| || ||||| ||||||||| | | ||| || |||| ||| ||| | Sbjct 254 ACACTGGCGAAATAACTGATTGACA-ATTTAGTAATGAAAT------AAATTTTTTTTGA 306 Query 4712 ATTATTCTTTAACTGCTGTTTTGCAAGAAAATATTAGAGTTCAACAAGGTGGTAGTGCGG 4771 | |||| | | || ||| | ||||||||||||||| |||||||||||||||||| Sbjct 307 AATATTACTGA--TGAAGTTATAAGAGAAAATATTAGAGTGCAACAAGGTGGTAGTGCGA 364 Query 4772 ATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGATTTTGAGACAGTTG 4831 ||||||||||| | || ||||||| | ||||||||||||||||| | ||| Sbjct 365 ATTATGAAAATTTAGACCAGCATGGAACACAAAAAATAATTTTTGATTTTGAAATTATTG 424 Query 4832 ATGAA 4836 ||||| Sbjct 425 ATGAA 429 Score = 87.8 bits (96), Expect = 9e-14 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 6057 ttttCAATCAGTAATTTTACCGGTGTTTTTGTTGATTGTTGGTAATTGT-GGTTCACCAT 6115 || ||||||||| |||| || |||||||| || |||||||| |||||| ||||| | | Sbjct 279 TTGTCAATCAGTTATTTCGCCAGTGTTTTTATTTATTGTTGG-AATTGTTGGTTCGCTGT 221 Query 6116 CACCATCTCAACGATAAAAACCTTTAA 6142 ||||||||||||||||| |||||||| Sbjct 220 TACCATCTCAACGATAAAGACCTTTAA 194 Score = 84.2 bits (92), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 11/131 (8%) Strand=Plus/Plus Query 6314 CAAAATAATTATAATCAGTAATTAATTTTCAATTACTATCTTTTGGTGGTTGTTGTGGTT 6373 |||| ||||||||||| ||||||||||||||| || | | ||||||||||||||||| Sbjct 2013 CAAATGAATTATAATCATCAATTAATTTTCAATTGCTGTTTGTTGGTGGTTGTTGTGGTG 2072 Query 6374 TTAGTGTAGTTTCTGCTTTATTGCCCTCGTTT-TTACTATTATTATTTGATTTAAGTGTT 6432 | | ||| || ||||||| |||| ||| | | ||| |||| || || || Sbjct 2073 T-----AAATTTATGTTTTATTG-----GTTTATTATTTTGATTGTTTGTGTTTGGTATT 2122 Query 6433 TTACAAGCAAT 6443 ||||||||||| Sbjct 2123 TTACAAGCAAT 2133 >seq13494 Length=2212 Score = 279 bits (308), Expect = 3e-71 Identities = 475/675 (70%), Gaps = 44/675 (7%) Strand=Plus/Minus Query 3602 GTTTTATTGGTGGAGGCAATCGCTATATTTGGAACTGGTTTTATTACTGTTATTATTAAT 3661 || ||||| || | ||| | || || |||||||| || ||||| || ||| |||||||| Sbjct 1502 GTGTTATTAGTTGTGGCGGTGGCGATTTTTGGAACCGGATTTATAACAGTTCTTATTAAT 1443 Query 3662 CAATTTACATCAGCAAAAAATATTATTATGGATTTATATAATTC---TGATACGTGGTTA 3718 ||||| | ||| | ||||||||||||| ||||||||| ||| |||| | |||| Sbjct 1442 CAATTGTCTGGAGCCACAAATATTATTATGAATTTATATAGTTCGAATGATTGATTGTTA 1383 Query 3719 ATTTGATTATTTGGTAGAATGGCAGTTTTGTTTAGTCATCCGTTAATGTTAACAATATCG 3778 | | | |||||| |||||||||| ||| ||| | ||| ||| | || Sbjct 1382 AA---AGCAATTGGTAAGTTGGCAGTTTTATTTTCGCATGAAGTGATGCAAACTGTTTCA 1326 Query 3779 AGTTTATATATTGTTGGGTTTATTGTTTCAAAAACATTGTATAGTTAGGAGTTAAGTTTA 3838 | | ||||||||||| |||||| ||||||||||||| |||||||||||| || || Sbjct 1325 GGAATTTATATTGTTGGATTTATTATTTCAAAAACATTATATAGTTAGGAGGAAAAAATA 1266 Query 3839 -TGAAAAAATCgttatctttatttgccatatttatttta---agttttttaggtttggtt 3894 || |||| ||| || |||| || | |||| | ||| || | || | || Sbjct 1265 ATGCGGAAATTTTTAGTTTGATTT------TTAACTTTACCGATTTTATTTGTTTCGTTT 1212 Query 3895 attccatttattactttaACGGCGTTTAGACCGTTAAATGAGAAGT-----ATTATACGC 3949 ||| || | | | || | | |||||| || | ||||| || | || Sbjct 1211 GTTCAGTTGAGTGCATTTTCTGT-TTTAGAA----AAGTACGAAGTTAAAAATGAAACTG 1157 Query 3950 TTAAACAAGA--GAA-TAGTACTGGTAAAGGTATTAATGAAACTGATTTTATTAATACAA 4006 ||| | || | ||| || || | |||| ||||||||| |||||||||||||||| Sbjct 1156 TTAGAAAAAAACGAAGTACTAATTTTAAA---ATTAATGAAGAAGATTTTATTAATACAA 1100 Query 4007 TGTTTTTACGCAGCAGtttttttGAAAATTGGTCTGAAACAAATTATTTTATTAATCCAA 4066 ||||||| || || ||||||||||||||||| ||| |||||||||||| |||| |||| Sbjct 1099 TGTTTTTGCGAAGTAGTTTTTTTGAAAATTGAAGTGATACAAATTATTTTGTTAACCCAA 1040 Query 4067 CTTTAAAAACATCaaaaaaaTTATTGTTTAATGATAAATGGTATTTGGATTTTTTACAAG 4126 |||||||||||||||| |||| | |||||| || || ||| | ||||||||| ||| Sbjct 1039 CTTTAAAAACATCAAAGTTATTAACTTATAATGAAAATTGATATCTAGATTTTTTAAAAG 980 Query 4127 ATAGTTATTCAACAGGAGTTGTTTATGATAAACCAAGTTCATCtttttttag-tttttAT 4185 | |||||| |||| || |||| | ||||||||| || | || ||||||| || ||| Sbjct 979 ACAGTTATGCAACTGGGATTGTGTTTGATAAACCTAG-TGATAAATTTTTAGAATTATAT 921 Query 4186 CACATGTGAGAT-AGT---TGAAAAAATACATATATGGTTGAAAAATTTTATGATGTTAA 4241 | | |||||| ||| || || |||| | || | || | ||||||| ||||| | Sbjct 920 AAAAATTGAGATAAGTATGTGCAACAATATAAAT----TAGATAGATTTTATAATGTTGA 865 Query 4242 AAAGGAAAATTTTTT 4256 || |||||||||| Sbjct 864 TAA--AAAATTTTTT 852 Score = 134 bits (148), Expect = 7e-28 Identities = 178/245 (73%), Gaps = 9/245 (4%) Strand=Plus/Minus Query 4592 TTAAAGGTTTTTATCGTTGAGATGGTGATGGTGAACCTGAAACACCAACTATCAACGAAA 4651 |||||||| ||||||||||||||||| | | ||||| || ||||| || || ||| Sbjct 538 TTAAAGGTCTTTATCGTTGAGATGGTAACAGCGAACCAACAATTCCAACAATAAATAAAA 479 Query 4652 ACACCGGTGAAATTACTGATTGAAATACTTATCAACAAAATTTTGTAAAAGAATTTATTG 4711 |||| || ||||| ||||||||| | | ||| || |||| ||| ||| | Sbjct 478 ACACTGGCGAAATAACTGATTGACA-ATTTAGTAATGAAAT------AAATTTTTTTTGA 426 Query 4712 ATTATTCTTTAACTGCTGTTTTGCAAGAAAATATTAGAGTTCAACAAGGTGGTAGTGCGG 4771 | |||| | | || ||| | ||||||||||||||| |||||||||||||||||| Sbjct 425 AATATTACTGA--TGAAGTTATAAGAGAAAATATTAGAGTGCAACAAGGTGGTAGTGCGA 368 Query 4772 ATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGATTTTGAGACAGTTG 4831 ||||||||||| | || ||||||| | ||||||||||||||||| | ||| Sbjct 367 ATTATGAAAATTTAGACCAGCATGGAACACAAAAAATAATTTTTGATTTTGAAATTATTG 308 Query 4832 ATGAA 4836 ||||| Sbjct 307 ATGAA 303 Score = 87.8 bits (96), Expect = 9e-14 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 6057 ttttCAATCAGTAATTTTACCGGTGTTTTTGTTGATTGTTGGTAATTGT-GGTTCACCAT 6115 || ||||||||| |||| || |||||||| || |||||||| |||||| ||||| | | Sbjct 453 TTGTCAATCAGTTATTTCGCCAGTGTTTTTATTTATTGTTGG-AATTGTTGGTTCGCTGT 511 Query 6116 CACCATCTCAACGATAAAAACCTTTAA 6142 ||||||||||||||||| |||||||| Sbjct 512 TACCATCTCAACGATAAAGACCTTTAA 538 >seq68896 Length=2876 Score = 224 bits (248), Expect = 5e-55 Identities = 376/543 (69%), Gaps = 56/543 (10%) Strand=Plus/Minus Query 5245 ATTAATGATAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGA 5302 ||| || ||||||| ||| || ||| |||| |||||||| ||||| ||| | | Sbjct 625 ATTGATTTTAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATA 568 Query 5303 AATTTTATACTAATTATTTACGAACGATTTTTGATTTAGAAAATAATACTTATGTTCAAG 5362 | ||||||| |||||||||||| || ||||||||||||||| | ||||| |||||| Sbjct 567 ACTTTTATAAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAG 508 Query 5363 GTTATAATAAAAAATATGGTTTATTAGTAAATAATGGTTTTAAAATTTATCCACGATATT 5422 | ||| ||||||||| |||||| ||||||| ||||||||||||||||| |||| |||| Sbjct 507 GGTATCATAAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATT 448 Query 5423 TTTATTTTTCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATC 5482 |||||||||| ||||| ||| || | |||||| | ||| | ||||| || ||| Sbjct 447 TTTATTTTTCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATA 388 Query 5483 GGTTTTATACCATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATA 5542 |||||| || | || ||||| | |||||||||| ||||| ||||||| ||||| Sbjct 387 AATTTTAT--CA-AACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATA 331 Query 5543 ATTATGATATTAAGTTAAATTCAGGTTATGTTTTTGGTGGT------------------- 5583 ||| | | |||| || ||||||| | |||| | | Sbjct 330 ATTTTAAAGTTAATGAGAAAGAAGGTTATTTGTTTGAAGATAAAAAGCAATATCCATTGC 271 Query 5584 --------GATTTA-CAA-TCAAAA-------TATG--GTTTA------CAATACAAG-- 5616 |||||| ||| |||||| |||| |||| || ||| || Sbjct 270 GAGTTAAAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTNAATATTCATTACGAGTT 211 Query 5617 -AAAATTGAAGAA--CAAAAAATCGGTTACAATGTTTTTGAATTGCAAGCTCAAAAAGAG 5673 || ||| | || |||||| | || || |||||||||||| ||||| |||||||| Sbjct 210 AAAGATTTATCAATTCAAAAAGTAGGGTATGGTGTTTTTGAATTACAAGCACAAAAAGAA 151 Query 5674 AATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGAGATAAAT 5733 ||||| | || | || || |||||||||||||| |||||||| ||| |||| ||| | Sbjct 150 AATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAACTGAAAAGATTTAACT 91 Query 5734 AGT 5736 ||| Sbjct 90 AGT 88 Score = 179 bits (198), Expect = 2e-41 Identities = 328/475 (69%), Gaps = 33/475 (7%) Strand=Plus/Minus Query 3579 GGTGTTAAATAATGATTAAATTAGTTTTATTGGTGGAGGCAATCGCTATATTTGGAACTG 3638 |||| || ||||||||||||| || ||||| || | ||| | || || |||||||| | Sbjct 2381 GGTGACAAGTAATGATTAAATTGGTGTTATTAGTTGTGGCGGTGGCGATTTTTGGAACCG 2322 Query 3639 GTTTTATTACTGTTATTATTAATCAATTTACATCAGCAAAAAATATTATTATGGATTTAT 3698 | ||||| || ||| ||||||||||||| | ||| | ||||||||||||| |||||| Sbjct 2321 GATTTATAACAGTTCTTATTAATCAATTGTCTGGAGCCACAAATATTATTATGAATTTAT 2262 Query 3699 ATAATTC---TGATACGTGGTTAATTTGATTATTTGGTAGAATGGCAGTTTTGTTTAGTC 3755 ||| ||| |||| | ||||| | | |||||| |||||||||| ||| | Sbjct 2261 ATAGTTCGAATGATTGATTGTTAA---AAGCAATTGGTAAGTTGGCAGTTTTATTTTCGC 2205 Query 3756 ATCCGTTAATGTTAACAATATCGAGTTTATATATTGTTGGGTTTATTGTTTCAAAAACAT 3815 || | ||| ||| | || | | ||||||||||| |||||| |||||||||||| Sbjct 2204 ATGAAGTGATGCAAACTGTTTCAGGAATTTATATTGTTGGATTTATTATTTCAAAAACAT 2145 Query 3816 TGTATAGTTAGGAGTTAAGTTTATGAAAAAAT--Cgttatctttatttgccatatttatt 3873 | |||||||||||| || ||| ||| | || |||| || | | || | | Sbjct 2144 TATATAGTTAGGAGGGAA------AAAATAATGCGGAAATTTTTAGTTTCATTTTTAACT 2091 Query 3874 tta---agttttttaggtttggttattccatttattactttaACGGCGTTTAGACCGTTA 3930 ||| | ||| || | || | || ||| || | | | || | | |||||| | Sbjct 2090 TTACCGATTTTATTTGTTTCGTTTGTTCAGTTAAGTGCATTTTCTG-TTTTAGA----AA 2036 Query 3931 AATGAGAAGT-----ATTATACGCTTAAACAAGAGAATAGTAC---TGGTAAAGGTATTA 3982 || | ||||| || | | ||| | || | |||||| | |||| |||| Sbjct 2035 AAAGTGAAGTTAAAAATGAAAGTGTTAGAAAAAAACGTAGTACTAATTTTAAA---ATTA 1979 Query 3983 ATGAAACTGATTTTATTAATACAATGTTTTTACGCAGCAGtttttttGAAAATTG 4037 ||||| |||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1978 ATGAAGAATATTTTATTAACACAATATTTTTACGCAGCAGTTTTTTTGAAAATTG 1924 Score = 114 bits (126), Expect = 6e-22 Identities = 171/240 (71%), Gaps = 11/240 (5%) Strand=Plus/Minus Query 4601 TTTATCGTTGAGATGGTGATGGTGAACCTGAAACACCAACTATCAACGAAAACACCGGTG 4660 ||||| |||||||||||| ||| |||| |||||||| || || | || ||| Sbjct 1385 TTTATTGTTGAGATGGTGGGGGTCAACCACAAACACCACAGAT---TGATACCAATGGTA 1329 Query 4661 AAATTACTGATTGAA----ATACTTATCAACAAAATTTTGTAAAAGAATTTATTGATTAT 4716 | ||| | || || ||| |||| ||||||| || ||||| ||| | || | Sbjct 1328 ATGTTA-AGTTTAAAATAGATATTTATAAACAAAA---AGTTAAAGATTTTTTAAATGAA 1273 Query 4717 TCTTTAACTGCTGTTTTGCAAGAAAATATTAGAGTTCAACAAGGTGGTAGTGCGGATTAT 4776 | |||| | | || | ||||||||||||||||| |||||||||||| ||||| ||||| Sbjct 1272 TATTTAGATATTATTATTCAAGAAAATATTAGAGTGCAACAAGGTGGTGGTGCGAATTAT 1213 Query 4777 GAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGATTTTGAGACAGTTGATGAA 4836 |||||| || | ||||||| | ||||||||||||||||| | |||||||| Sbjct 1212 GAAAATTTAGATCAACATGGAACACAAAAAATAATTTTTGATTTTGAAATTATTGATGAA 1153 Score = 87.8 bits (96), Expect = 9e-14 Identities = 111/163 (68%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 3024 TTGCCAATAAGTATGATAGTCAATGATTAAAATTTGTGCGTGATTTAAAAAATGNNNNNN 3083 |||| ||||| ||||||||| | |||||| |||||| |||||||||||||||| Sbjct 2876 TTGCTAATAAATATGATAGTTATTGATTATCATTTGTTCGTGATTTAAAAAATGATGAAA 2817 Query 3084 NNNNNNNNNNNNNNNNNNNNNNNNGGTCGGAAATTACAAAATTAAGTGTTAAAGAACGAT 3143 | | || ||| | ||||| | | ||||||||| | Sbjct 2816 TTGAAAATAAAACAGAATATTTTTGAACTGATATTGCTAAATTGACTAATAAAGAACGCT 2757 Query 3144 TGGAGTTATTTGATATTGATATTTTGAAAAAGAATTTAAAACC 3186 | || |||||||| ||||||||||||||||| ||||||||||| Sbjct 2756 TAGAATTATTTGACATTGATATTTTGAAAAATAATTTAAAACC 2714 >seq14856 Length=1519 Score = 210 bits (232), Expect = 1e-50 Identities = 231/303 (76%), Gaps = 7/303 (2%) Strand=Plus/Plus Query 5245 ATTAATGATAAATTACAATTTGATAAATTATT--AAATAGTATGTTTAAGATTTCACAGA 5302 ||| || ||||||| ||| || ||| |||| |||||||| ||||| ||| | | Sbjct 1137 ATTGATTTTAAATTAAAAT--GAAAAAATATTTTAAATAGTAGTTTTAAAATTATGAATA 1194 Query 5303 AATTTTATACTAATTATTTACGAACGATTTTTGATTTAGAAAATAATACTTATGTTCAAG 5362 | ||||||| |||||||||||| || ||||||||||||||| | ||||| |||||| Sbjct 1195 ACTTTTATAAAAATTATTTACGAGTAATGTTTGATTTAGAAAATGAAACTTACATTCAAG 1254 Query 5363 GTTATAATAAAAAATATGGTTTATTAGTAAATAATGGTTTTAAAATTTATCCACGATATT 5422 | ||| ||||||||| |||||| ||||||| ||||||||||||||||| |||| |||| Sbjct 1255 GGTATCATAAAAAATTTGGTTTGTTAGTAAGTAATGGTTTTAAAATTTTTCCAAAGTATT 1314 Query 5423 TTTATTTTTCGGATAAATATAAGCAATTAGATATTAAATTATATTCAGCATTTAAAAATC 5482 |||||||||| ||||| ||| || | |||||| | ||| | ||||| || ||| Sbjct 1315 TTTATTTTTCTGATAAGTATCAGAACTTAGATGTAAAAATTTATTCTTCACACGCCAATA 1374 Query 5483 GGTTTTATACCATTAATAATTATGGTAGTGTTTTTAATTATGATTTTTCGGTTGCTAATA 5542 |||||| || | || ||||| | |||||||||| ||||| ||||||| ||||| Sbjct 1375 AATTTTAT--CA-AACAAAGTATGGACGAGTTTTTAATTTTGATTATTCGGTTTTTAATA 1431 Query 5543 ATT 5545 ||| Sbjct 1432 ATT 1434 Score = 134 bits (148), Expect = 7e-28 Identities = 178/245 (73%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 4592 TTAAAGGTTTTTATCGTTGAGATGGTGATGGTGAACCTGAAACACCAACTATCAACGAAA 4651 |||||||| ||||||||||||||||| | | ||||| || ||||| || || ||| Sbjct 421 TTAAAGGTCTTTATCGTTGAGATGGTAACAGCGAACCAACAATTCCAACAATAAATAAAA 480 Query 4652 ACACCGGTGAAATTACTGATTGAAATACTTATCAACAAAATTTTGTAAAAGAATTTATTG 4711 |||| || ||||| ||||||||| | | ||| || |||| ||| ||| | Sbjct 481 ACACTGGCGAAATAACTGATTGACA-ATTTAGTAATGAAAT------AAATTTTTTTTGA 533 Query 4712 ATTATTCTTTAACTGCTGTTTTGCAAGAAAATATTAGAGTTCAACAAGGTGGTAGTGCGG 4771 | |||| | | || ||| | ||||||||||||||| |||||||||||||||||| Sbjct 534 AATATTACTGA--TGAAGTTATAAGAGAAAATATTAGAGTGCAACAAGGTGGTAGTGCGA 591 Query 4772 ATTATGAAAATCCGAATAAGGTTGGAACAAAGCGGATAATTTTTGATTTTGAGACAGTTG 4831 ||||||||||| | || ||||||| | ||||||||||||||||| | ||| Sbjct 592 ATTATGAAAATTTAGACCAGCATGGAACACAAAAAATAATTTTTGATTTTGAAATTATTG 651 Query 4832 ATGAA 4836 ||||| Sbjct 652 ATGAA 656 Score = 87.8 bits (96), Expect = 9e-14 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 6057 ttttCAATCAGTAATTTTACCGGTGTTTTTGTTGATTGTTGGTAATTGT-GGTTCACCAT 6115 || ||||||||| |||| || |||||||| || |||||||| |||||| ||||| | | Sbjct 506 TTGTCAATCAGTTATTTCGCCAGTGTTTTTATTTATTGTTGG-AATTGTTGGTTCGCTGT 448 Query 6116 CACCATCTCAACGATAAAAACCTTTAA 6142 ||||||||||||||||| |||||||| Sbjct 447 TACCATCTCAACGATAAAGACCTTTAA 421 >seq70930 Length=3022 Score = 170 bits (188), Expect = 1e-38 Identities = 263/368 (71%), Gaps = 14/368 (4%) Strand=Plus/Minus Query 5666 AAAAAGAGAATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAG 5725 ||||||| ||||| | || | || || |||||||||||||| |||||||||||| ||| Sbjct 1743 AAAAAGAAAATGAGTTTTATCATTACTACGATTTTAATTTTGGAATTTATAATTGAAAAG 1684 Query 5726 AGATAAATAGTGGTGGTTTATTTCCTGATAAG-CAATGATGACAA-GTACAATATGTAAC 5783 | ||| |||| || || | | | | | |||||||| | |||| || || Sbjct 1683 ATTTAACTAGTCTTG-TTGACAAACCAACAGGACAATGATGNNNNNGAACAAATTGAAAA 1625 Query 5784 GCCTGAGGGTTGATGATAT--TTTGGTGCTCATATTAAAAATGCCGTA--ATTTGAATTG 5839 | | | | | ||||| |||| |||||| ||||||| ||| || ||||||| Sbjct 1624 TTGTAAATGAT-ACGATATGGTTTG----TCATATCAAAAATG--GTACCATATGAATTG 1572 Query 5840 TTAATACTATTCCGGGAGTTAAGCAAGTTAACGAGTTAGCGAGTGGTGTTGGCAAGGTTT 5899 |||||| ||| || || ||||| |||| ||||||||||| ||||| ||||| || | | Sbjct 1571 TTAATAATATCCCTGGTGTTAAACAAGCAAACGAGTTAGCCAGTGGAGTTGGTAAATTAT 1512 Query 5900 TTGAGACAGTATATAGtttttttAGTCAAATATTCGAAGTATGAAAATTTAATCCAGCAT 5959 || | || ||||| ||||||| |||| ||| ||| |||||||||||||| || | Sbjct 1511 TTCAAACGACATATAATTTTTTTGCACAAACATTTGAAATATGAAAATTTAATTTAGATT 1452 Query 5960 TGTATAATACAATAACAAATATCTTTTTATTAATTATCTTTATGAAATTTGTACGATTAA 6019 | |||| | || || |||| |||||||||||| | |||||||||||| | || | Sbjct 1451 TTTATATTGTCATTACGAATACATTTTTATTAATTGTGTTTATGAAATTTATCAGAATGT 1392 Query 6020 TATAAAAA 6027 | |||||| Sbjct 1391 TTTAAAAA 1384 >seq65094 Length=3539 Score = 132 bits (146), Expect = 2e-27 Identities = 172/239 (72%), Gaps = 13/239 (5%) Strand=Plus/Minus Query 5886 TGTTGGCAAGGTTTTTGAGACAGTATATAGtttttttAGTCAAATATTCGAAGTATGAAA 5945 |||||| ||| | ||| | ||| ||||| ||||||| ||||| ||| || ||||||| Sbjct 2668 TGTTGGTAAGTTATTTCAAACAACATATAATTTTTTTGCTCAAACATTTGAGATATGAAA 2609 Query 5946 ATTTAATCCAGCATTGTATAATACAATAACAAATATCTTTTTATTAATTATCTTTATGAA 6005 ||||||| || || |||| | || ||||||| |||||||||||||| |||||||| Sbjct 2608 ATTTAATTTAGATTTTTATATTGTTATTACAAATACATTTTTATTAATTATATTTATGAA 2549 Query 6006 ATTTGTACGATTAATATAAAAAAGGA------------ACTGTTATTAAG-TTCCttttt 6052 |||| | ||| | | ||||||| || | | ||||| || || ||||| Sbjct 2548 ATTTATTCGAATGTTTTAAAAAAAGAAAAAAATAATCTAATTTTATTTAGATTATTTTTT 2489 Query 6053 gtttttttCAATCAGTAATTTTACCGGTGTTTTTGTTGATTGTTGGTAATTGTGGTTCA 6111 || ||| | | ||||||| ||| |||| ||||||||| |||||| | ||||||| Sbjct 2488 ATTCATTTTAGTTTGTAATTTCACCAGTGTCTTTGTTGATAGTTGGTGTTATTGGTTCA 2430 >seq62271 Length=1728 Score = 111 bits (122), Expect = 8e-21 Identities = 79/91 (87%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 5646 TGTTTTTGAATTGCAAGCTCAAAAAGAGAATGATATGTACCGATATTATGATTTTAATTT 5705 ||||||||||||||||||||||||||| ||||| | |||| ||||||||||||||||| Sbjct 39 TGTTTTTGAATTGCAAGCTCAAAAAGAAAATGAATTTTACCATTATTATGATTTTAATTT 98 Query 5706 TGGGATTTATAATTGACAAGAGATAAATAGT 5736 ||| ||||| |||||| |||| ||| |||| Sbjct 99 TGGAATTTACAATTGAAAAGATTTAACTAGT 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25046024587832