Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_030296.1 Length=5071 Score E Sequences producing significant alignments: (Bits) Value seq205305 96.9 1e-16 seq246193 82.4 2e-12 >seq205305 Length=818 Score = 96.9 bits (106), Expect = 1e-16 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 1926 CTaaaaaaaaTACCT-TTTTTGTTCTCTCCCCATCGAATGCTGGCAAAAATTTTTTCTTC 1984 |||||||||| | ||||||| | || || | || ||||| ||||| |||| ||| Sbjct 6 CTAAAAAAAAACTGTATTTTTGTATTGTCACCTCCAAACGCTGGTAAAAACTTTTATTTC 65 Query 1985 GATTGCATTGTACATTTTTATTTGAATTTCGGTCTGATCGGTAATTTTAATAAGTACCAA 2044 ||| || | |||| | ||| |||||||||| || |||||||||||||| || | Sbjct 66 GATGCTGTTATTCATTACTTTTTAAATTTCGGTCAAATTGGTAATTTTAATAAATATAAT 125 Query 2045 AATTTCCCTTTACAAGAGTGTGTTCACAAACGTATTCTTCTGTGGAACGAACCACAAGCT 2104 ||||| ||| | ||| || ||| | | | | ||| | | |||||||| || || | Sbjct 126 AATTTTCCTCTTATAGAATGCGTTAATAGAAGAATTATATTATGGAACGAGCCTCATTGT 185 Query 2105 GAGCCTAGTGCTTTTGAAACTCTGAAAACGTTA 2137 || || ||| ||||||||| | |||| |||| Sbjct 186 GAAACTTCTGCATTTGAAACTATTAAAATGTTA 218 >seq246193 Length=2338 Score = 82.4 bits (90), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1926 CTaaaaaaaaTACCTTTTTTGTTCTCTCCCCATCGAATGCTGGCAAAAATTTTTTCTTCG 1985 |||| |||||| || || | | || ||| | ||||| || ||||||| |||||| | Sbjct 1763 CTAAGAAAAATTGTTTATTCATATTATCTCCACCAAATGCAGGTAAAAATTATTTCTTTG 1822 Query 1986 ATTGCATTGTACATTTTTATTTGAATTTCGGTCTGATCGGTAATTTTAATAAGTACCAAA 2045 || || | |||| | ||| || || || | || || ||||||||||||||| | | Sbjct 1823 ATGCTATAATTCATTACTTTTTAAACTTTGGACAAATAGGAAATTTTAATAAGTACAATA 1882 Query 2046 ATTTCCCTTTACAAGAGTGTGTTCACAAACGTATTCTTCTGTGGAACGAACCACA 2100 | || ||| | ||||||||| ||| | | || || | ||||||||||| || Sbjct 1883 ACTTTCCTCTGATGGAGTGTGTTAACAGAAGAATCATTTTATGGAACGAACCTCA 1937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16071652675620