Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_001998.1 Length=4529 Score E Sequences producing significant alignments: (Bits) Value seq59597 174 5e-40 seq117558 156 1e-34 seq160671 147 6e-32 seq6488 147 6e-32 seq172159 127 6e-26 seq172227 111 5e-21 seq172111 98.7 3e-17 seq36439 98.7 3e-17 seq8165 91.5 4e-15 >seq59597 Length=4602 Score = 174 bits (192), Expect = 5e-40 Identities = 304/435 (70%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 1053 CTTCGTGAAGCTTTCCAATTGCAAAAGCTTTATGAGAGAGATGCTCGTGGTGGAACAAGG 1112 || |||||||| ||||| | ||||| | |||| | || |||||| || || || Sbjct 2447 CTGCGTGAAGCGTTCCAGGTACAAAAAATGCTTGAGCGTGACGCTCGTTCAGGTACTCGG 2506 Query 1113 TACATTGAGATTATTCGTTCCCATTTCAATGTGCAGTCTCCAGATGCAAGGTTGCAACGT 1172 |||| |||||| || | | ||||| |||| || || ||||| ||| | ||||| Sbjct 2507 TACACTGAGATCATCCAAGCTCATTTTGGTGTGACCTCGCCGGATGCCAGGCTTCAACGC 2566 Query 1173 GCAGAGTATCTTGGAGGTTCTTCAACTCCTGTGAATATTTCTCCGATTCCACAGACTTCC 1232 | || || ||||| || ||||| | ||| || || |||| | || ||||| Sbjct 2567 CCTGAATACCTTGGTGGAGGATCAACCCGTGTCAACGTTAATCCGGTGCCTCAGACAAGT 2626 Query 1233 TCAACAGACTCCACATCTCCTCAAGGAAATCTTGCTGCTTATGGTACAGC--GATTGGAT 1290 || || || | ||| | || ||||| || ||||| |||| |||||| | | || ||| Sbjct 2627 TCTACGGATGCTACAACGCCACAAGGCAACCTTGCGGCTTTTGGTACTGTTGGGTTCGAT 2686 Query 1291 CGAAGCGAGTCTTCACAAAGTCTTTCACAGAGCATGGTGTAATTCTTGGATTAGCCTCTG 1350 || | | ||| || || || |||||||||||||| ||| | || | || | | Sbjct 2687 CGT--CATGGCTTTACTAAATCCTTCACAGAGCATGGACATATTATCGGTATTGCTTGCG 2744 Query 1351 TACGTGCCGATCTCAACTATCAGCAAGGTTTGGATAGGATGTGGTCACGA-AGAACGCGC 1409 | || |||||||| | ||||||||||||| | | | ||||||||||| || | || Sbjct 2745 TTCGGGCCGATCTGACCTATCAGCAAGGTCTCAACCGTATGTGGTCACGTCAGGAT-CGG 2803 Query 1410 TGGGACTTTTATTGGCCTGCTCTTAGC-CATTTAGGTGAGCAAGCTGTGCTCAATAAAGA 1468 | ||||||||||||||||| || || ||||| ||||| ||||| || |||||||| || Sbjct 2804 TACGACTTTTATTGGCCTGC-ATTGGCTCATTTGGGTGAACAAGCGGTACTCAATAAGGA 2862 Query 1469 GATTTATTGCCAAGG 1483 ||||||| ||||| Sbjct 2863 GATTTATGCACAAGG 2877 >seq117558 Length=7756 Score = 156 bits (172), Expect = 1e-34 Identities = 317/460 (69%), Gaps = 12/460 (3%) Strand=Plus/Minus Query 1030 CTTCTCCTGTGACGATTAATTCTCTTCGTGAAGCTTTCCAATTGCAAAAGCTTTATGAGA 1089 || || ||| ||||||||| ||| || ||||| ||||| | || || | || Sbjct 5075 CTACTGCTGCAACGATTAATGATCTGCGCGAAGCGTTCCAGGTTCAGAAAATGCTCGAAC 5016 Query 1090 GAGATGCTCGTGGTGGAACAAGGTACATTGAGATTATTCGTTCCCATTTCAATGTGCAGT 1149 | ||||||||| ||| || ||||||| |||||||||| |||||||| ||| | Sbjct 5015 GTGATGCTCGTTCTGGTACCAGGTACACGGAGATTATTCAGGCCCATTTCGGTGTAACCT 4956 Query 1150 CTCCAGATGCAAGGTTGCAACGTGCAGAGTATCTTGGAGGTTCTTCAACTCCTG--TGAA 1207 |||| ||||| | | || || | || || || || ||| ||| ||| | | || Sbjct 4955 CTCCTGATGCTCGTCTCCAGCGCCCTGAATACCTCGGCGGTGGTTCT--TCCAGGATTAA 4898 Query 1208 TATTTCTCCGATTCCACAGACTTCCTCAACAGACTCCACATCTCCTCAAGGAAATCTTGC 1267 |||||| ||| |||| || || || || || | || |||||||||| ||||| || Sbjct 4897 TATTTCGCCGGTTCCTCAAACGAGTTCGACTGATGCGACTACTCCTCAAGGTAATCTCGC 4838 Query 1268 TGCTTATGGTACAGC--GATTGGATCGAAGCGAGTCTTCACAAAGTCTTTCACAGAGCAT 1325 || || |||||| | | || ||||| | || ||||| |||||||| || |||||| Sbjct 4837 TGGTTTTGGTACTGTTGGCTTTGATCGCCATG-GT-TTCACCAAGTCTTTTACTGAGCAT 4780 Query 1326 GGTGTAATTCTTGGATTAGCCTCTGTACGTGCCGATCTCAACTATCAGCAAGGTTTGGAT 1385 ||| ||| |||| | || | || || ||||| || | |||||| || || | | Sbjct 4779 GGTCATATTATTGGCCTCGCTTGCGTCCGGGCCGACCTGACCTATCAACAGGGCCTTAAC 4720 Query 1386 AGGATGTGGTCACGA-AGAACGCGCTGGGACTTTTATTGGCCTGCTCTTAGCCATTTAGG 1444 | |||||||| || || || || | |||||||||||||| || | ||| | || Sbjct 4719 CGTATGTGGTCCCGGCAGGAC-CGGTACGACTTTTATTGGCCGGCGTTGGCCCACCTTGG 4661 Query 1445 TGAGCAAGCTGTGCTCAATAAAGAGATTTATTGC-CAAGG 1483 |||||| || || | ||||| ||||||| |||| ||||| Sbjct 4660 TGAGCAGGCGGTATTGAATAAGGAGATTT-TTGCTCAAGG 4622 >seq160671 Length=4645 Score = 147 bits (162), Expect = 6e-32 Identities = 489/762 (64%), Gaps = 38/762 (5%) Strand=Plus/Minus Query 1060 AAGCTTTCCAATTGCAAAAGCTTTATGAGAGAGATGCTCGTGGTGGAACAAGGTACATTG 1119 ||||||| ||| | || || | | || | ||||||| | || || || || || | | Sbjct 3122 AAGCTTTTCAAGTACAGAAATTATTGGAAAAAGATGCTAGAGGCGGTACTAGATATACAG 3063 Query 1120 AGATTATTCGTTCCCATTTCAATGTGCAGTCTCCAGATGCAAGGTTGCAACGTGCAGAGT 1179 | |||||| | ||||| ||| || |||||| | | | ||| | |||||| Sbjct 3062 AAATTATTAGAGGTCATTTTGGTGTAACTTCACCAGATCAACGACTTCAAAGACCAGAGT 3003 Query 1180 ATCT---TGGAGGTTCTTCAACTCCTGTGAATATTTCTCCGATTCCACAGACTTCCTCAA 1236 || | |||||| ||||| | | || ||||| || | ||||||| || |||| Sbjct 3002 ATTTAGGTGGAGGCTCTTCC---CAAATTAACATTTCACCCGTAGCACAGACGTCGTCAA 2946 Query 1237 CAGACTCCACATCTCCTCAAGGAAATCTTGCTGCTTATGGTACAGCGATTGGATCGAAGC 1296 ||||| | ||| | |||||||||||| | | |||| |||||| | |||| Sbjct 2945 CAGACGCAACAACACCTCAAGGAAATTTATCAGCTTTTGGTACTACAGGTGGAAGACTTG 2886 Query 1297 GAGTCTTCACAAAGTCTTTCACAGAGCATGGTGTAATTCTTGGATTAGCCTCTGTACGTG 1356 | | ||||| ||| ||| ||||| ||| |||| | | ||| |||| | ||| | | Sbjct 2885 GTGGATTCACTAAGAGTTTTACAGAACATTGTGTTTTATTAGGACTAGCATGTGTGAGAG 2826 Query 1357 CCGATCTCAACTATCAGCAAGGTTTGGATAGGATGTGGTCACGAAGAACGCGCTGGGACT 1416 | ||||| | ||||| ||||||| || | | ||||||||| ||| || | || | Sbjct 2825 CTGATCTTACTTATCAAGAAGGTTTAGACCGCAAATGGTCACGACAAACACGGTACGATT 2766 Query 1417 TTTATTGGCCTGCTCTTAGC-CATTTAGGTGAGCAAGCTGTGCTCAATAAAGAGATTTAT 1475 |||||||||| | ||||| ||| | || || |||||||| | || ||||||||||| Sbjct 2765 TTTATTGGCCATCA-TTAGCTCATATTGGCGAACAAGCTGTATTAAACAAAGAGATTTA- 2708 Query 1476 TGCCAAGGTCCTGCAGTTAAGGATGCTCAGAATGGTAATGTTGTTGTGGATGAGCAAGTC 1535 ||||| | ||| | |||| | ||||| | || Sbjct 2707 -----------TGCAG--ATGGAAGTTCAGCA----------------GATGAAGATGTT 2677 Query 1536 TTTGGATATCAGGAGAGATTTGCGGAGTATCGCTATAAGACTTCGAAAATTACTGGGAAG 1595 ||||| |||||||| |||| || || ||| | ||| |||| |||||||| || | Sbjct 2676 TTTGGTTATCAGGAAAGATATGGAGAATATAGATATTTTCCTTCAAAAATTACAGGATTG 2617 Query 1596 TTCCGATCAAATGCTACAGGTTCTTTAGATGCATGGCATTTAGCTCAGCAGTTTGAGAAT 1655 || || ||||| || | || | ||| |||||| | |||| | |||| Sbjct 2616 TTTAGAAGCAATGCAACTGCATCACTTGATTATTGGCATCTTTCTCAAGAATTTGGTTCG 2557 Query 1656 CTTCCAACACTTTCTCCAGAGTTTATCGAAGAAAATCCTCCTATGGATCGTGTTGTTGCT 1715 | ||||||||| | || || |||||||||| ||| | || | || |||| Sbjct 2556 TTACCAACACTTAATGATTCTTTCATACAAGAAAATCCACCTGTAAATAGAGTAATTGCA 2497 Query 1716 GTAGATACTGAGCCAGATTTTCTCTTAGATGGTTGGTTTTCATTGCGTTGTGCAAGACCA 1775 | | ||||||| | || || || ||| | | ||| || |||||| Sbjct 2496 ACACCTGATGAGCCACACTTGCTGTTTGATTCATATATAGAATTAATAACAGCCAGACCA 2437 Query 1776 ATGCCTGTCTATTCTGTTCCAGGCCTCATTGATCATTTCTAA 1817 ||||| || |||||||||||||| || || |||||||||||| Sbjct 2436 ATGCCAGTTTATTCTGTTCCAGGTCTAATCGATCATTTCTAA 2395 >seq6488 Length=2331 Score = 147 bits (162), Expect = 6e-32 Identities = 238/338 (70%), Gaps = 6/338 (2%) Strand=Plus/Minus Query 1149 TCTCCAGATGCAAGGTTGCAACGTGCAGAGTATCTTGGAGGTTCTTCAACTCCTGTGAAT 1208 || || ||||| ||| | |||||| | || || ||||| || ||||| | ||| ||| Sbjct 1582 TCACCTGATGCGAGGCTACAACGTCCTGAATACCTTGGTGGAGGATCAACCCGTGTCAAT 1523 Query 1209 ATTTCTCCGATTCCACAGACTTCCTCAACAGACTCCACATCTCCTCAAGGAAATCTTGCT 1268 |||| || |||| || ||||| || ||||| | || |||| || || ||||||||| Sbjct 1522 GTTTCGCCTGTTCCTCAAACTTCTTCTACAGATGCGACCACTCCCCAGGGCAATCTTGCT 1463 Query 1269 GCTTATGGTACAG--CGATTGGATCGAAGCGAGTCTTCACAAAGTCTTTCACAGAGCATG 1326 |||| ||||| | | || ||||| | | || || ||||||||||| || || | Sbjct 1462 GCTTTCGGTACTGTCGGTTTCGATCG--CCATGGTTTTACTAAGTCTTTCACCGAACACG 1405 Query 1327 GTGTAATTCTTGGATTAGCCTCTGTACGTGCCGATCTCAACTATCAGCAAGGTTTGGATA 1386 || || ||||| | || | ||| | |||||| | | |||||||||||| || | Sbjct 1404 GTCACATCATTGGAATTGCGTGTGTTAGAGCCGATATTACCTATCAGCAAGGACTGAACC 1345 Query 1387 GGATGTGGTCACG-AAGAACGCGCTGGGACTTTTATTGGCCTGCTCTTAGCCATTTAGGT 1445 | |||||||| || || || || | || |||||||||||||| ||| || | || Sbjct 1344 GCATGTGGTCTCGCCAGGAC-CGGTATGATTTTTATTGGCCTGCACTTGCTCACCTGGGC 1286 Query 1446 GAGCAAGCTGTGCTCAATAAAGAGATTTATTGCCAAGG 1483 || ||||| || || ||||| || |||||| ||||| Sbjct 1285 GAACAAGCCGTACTGAATAAGGAAATTTATGCACAAGG 1248 >seq172159 Length=4363 Score = 127 bits (140), Expect = 6e-26 Identities = 266/396 (67%), Gaps = 9/396 (2%) Strand=Plus/Plus Query 1208 TATTTCTCCGATTCCACAGACTTCCTCAACAGACTCCACATCTCCTCAAGGAAATCTTGC 1267 |||||| || ||| | || || || || || || || ||| | || ||||| || || || Sbjct 3834 TATTTCCCCTATTGCTCAAACATCATCCACCGATTCTACAACCCCACAAGGTAACCTAGC 3893 Query 1268 TGCTTATGGTACAGCGATTGGATCGAAGCGAGTCTTCACAAAGTCTTTCACAGAGCATGG 1327 |||| ||||| | | || || | | |||||||| || || || |||||| | Sbjct 3894 TGCTATGGGTACCGTTACTGTTTCTGGACATGGATTCACAAAATCCTTTACGGAGCATTG 3953 Query 1328 TGTAATTCTTGGATTAGCCTCTGTACGTGCCGATCTCAACTATCAGCAAGGTTTGGATAG 1387 ||| || || ||| | | ||| ||||| || | | ||| || ||||| || | || Sbjct 3954 TGTTATCCTGGGAATGGTAAATGTTCGTGCAGACATTACCTACCAACAAGGCTTAAACAG 4013 Query 1388 GATGTGGTCACGAAGAACGCGCTGGGACTTTTATTGGCCTGCTCTTAGCCATTTAGGTGA 1447 |||| || |||| | ||||||| |||||||||| ||||| ||| ||||||| Sbjct 4014 AATGTTTAGCCGGCGAACTAGGTGGGACTATTATTGGCCTTCTCTTGCCCACCTAGGTGA 4073 Query 1448 GCAAGCTGTGCTCAATAAAGAGATTTATTGCCAAGGTCCTGCAGTTAAGGATGCTCAGAA 1507 |||||| | ||||| || || || ||| ||||| || || |||| | Sbjct 4074 GCAAGCAATCCTCAACAAGGAAATATATGCACAAGGAAGTGATGTACTCGATG------A 4127 Query 1508 TGGTAATGTTGTTGTGGATGAGCAAGTCTTTGGATATCAGGAGAGATTTGCGGAGTATCG 1567 ||| || ||||| ||||| || |||||||| || ||||||||||| || || || Sbjct 4128 CGGTGATATTGTT---GATGACATGGTATTTGGATACCAAGAGAGATTTGCTGAATACCG 4184 Query 1568 CTATAAGACTTCGAAAATTACTGGGAAGTTCCGATC 1603 |||||| | || | || || || || || |||| Sbjct 4185 TTATAAGCCATCAATTATCACAGGTAAATTTAGATC 4220 >seq172227 Length=4743 Score = 111 bits (122), Expect = 5e-21 Identities = 496/781 (64%), Gaps = 46/781 (6%) Strand=Plus/Minus Query 1053 CTTCGTGAAGCTTTCCAATTGCAAAAGCTTTATGAGAGAGATGCTCGTGGTGGAACAAGG 1112 ||||||||||| || || | ||| || | || | || ||| | || || ||| | Sbjct 870 CTTCGTGAAGCGTTTCAGATTCAAGGTCTCTTAGAACGTGACGCTAGAGGCGGTACACGT 811 Query 1113 TACATTGAGATTATTCGTTCCCATTTCAATGTGCAGTCTCCAGATGCAAGGTTGCAACGT 1172 |||| ||||||||| |||||||| ||| ||| ||| | |||||||| Sbjct 810 TACACAGAGATTATTAAGTCCCATTTTGGTGTTACTAGTCCGGATTATCGCATGCAACGT 751 Query 1173 GCAGAGTATCTTGGAGGTTCTTCAACTCCTGTGAATATTTCTCCGATTCCACAGACTTCC 1232 | |||||||||||||| ||| || || || || || | | ||| | || ||||| Sbjct 750 CCTGAGTATCTTGGAGGCGGTTCTACACCGTTGCATGTTAATGCTATTGCGCAAACTTCT 691 Query 1233 TCAACAGACTCCACATCTCCTCAAGGAAATCTTGCTGCTTATGG-TACAG--CGATTGGA 1289 || || || | || || ||||| ||| | || ||| |||| ||| | | | | Sbjct 690 TCTACTGATGCTACTAGCCCACAAGGTAATTTGGCGGCT-ATGGCTACCGTTCAAGTTCG 632 Query 1290 TCGAAGCGAGTCTTCACAAAGTCTTTCACAGAGCATGGTGTAATTCTTGGATTAGCCTCT 1349 | || | || || | ||||| || || |||||| |||| ||| |||| | || | Sbjct 631 TGGACATG-GTTTTG-CTAAGTCGTTTACTGAGCATTGTGTTATTATTGGTCTTGCTAGT 574 Query 1350 GTACGTGCCGATCTCAACTATCAGCAAGGTTTGGATAGGATGTGGTCACGAAGAACGCGC 1409 || ||||| ||| | || |||||||||||| | | | |||||||| || || ||| Sbjct 573 GTTCGTGCTGATTTGAATTATCAGCAAGGTCTTAACCGTATGTGGTCTCGCCAGACTCGC 514 Query 1410 TGGGACTTTTATTGGCCTGCTCTTAGCCATTTAGGTGAGCAAGCTGTGCTCAATAAAGAG 1469 | || || |||| ||||| ||| || | ||||| |||||||| | | ||| || Sbjct 513 TATGATTTCTATTATCCTGCACTTGCACACCTTGGTGAACAAGCTGTTTTGAGTAAGGAA 454 Query 1470 ATTTATTGCCAAGGTCCTGCAGTTAAGGATGCTCAGAATGGTAATGTTGTTGTGGATGAG 1529 |||||| | || |||| | | | ||| || Sbjct 453 ATTTATGCGGACGGCTCTGCTGATGACGATACT--------------------------- 421 Query 1530 CAAGTCTTTGGATATCAGGAGAGATTTGCGGAGTATCGCTATAAGACTTCGAAAATTACT 1589 || ||||| |||||||| | | ||| || |||||||||||| | || |||||| Sbjct 420 ---GTTTTTGGTTATCAGGAACGTTATGCTGAATATCGCTATAAGCCCTCTTTGATTACT 364 Query 1590 GGGAAGTTCCGATCAAATGCTACAGGTTCTTTAGATGCATGGCATTTAGCTCAGCAGTTT 1649 || ||||||| | | | | ||||| ||||| |||||||| |||||| | ||| Sbjct 363 GGTCAGTTCCGTAGTACTTATTCGCAATCTTTGGATGCTTGGCATTTGGCTCAGAAATTT 304 Query 1650 GAGAATCTTCCAACACTTTCTCCA-GAGTTTATCGAAGAAAATCCTCCTATGGATCGTGT 1708 || | | || || | | |||||||| ||| | |||||| | || ||||| Sbjct 303 GATGA-CCGCCCTGTTTTAAGCGAGGAGTTTATTCGCGAAGACCCTCCTTTTGAGCGTGT 245 Query 1709 TGTTGCTGT---AGATACTG---AGCCAGATTTTCTCTTAGATGGTTGGTTTTCATT-GC 1761 | ||||||| ||| ||| | || | ||| | || || ||| ||| |||| Sbjct 244 TATTGCTGTTCAGGATTCTGATTATCCTCAGTTTATTTTTGACAGTT-ATTTCCATTATT 186 Query 1762 GTTGTGCAAGACCAATGCCTGTCTATTCTGTTCCAGGCCTCATTGATCATTTCTAATTTC 1821 ||||| | || |||||| | | |||| || ||| | ||| ||||||||||| | Sbjct 185 ATTGTGACCGTCCTATGCCTACTTTTGCTGTGCCGGGCTTAATTTCACATTTCTAATTGC 126 Query 1822 T 1822 | Sbjct 125 T 125 >seq172111 Length=4147 Score = 98.7 bits (108), Expect = 3e-17 Identities = 286/438 (65%), Gaps = 3/438 (1%) Strand=Plus/Plus Query 1041 ACGATTAATTCTCTTCGTGAAGCTTTCCAATTGCAAAAGCTTTATGAGAGAGATGCTCGT 1100 || |||||| ||||| |||||||| ||| | ||||| | ||||| | ||||||||| Sbjct 3312 ACTATTAATCAACTTCGAGAAGCTTTTCAAATTCAAAAAATGTATGAAAAGGATGCTCGT 3371 Query 1101 GGTGGAACAAGGTACATTGAGATTATTCGTTCCCATTTCAATGTGCAGTCTCCAGATGCA 1160 ||||| || | || | ||| |||||||| | || ||| ||| || || ||||| Sbjct 3372 GGTGGTACTCGTTATACTGAACTTATTCGTGCTCACTTCGGTGTTACTTCACCTGATGCT 3431 Query 1161 AGGTTGCAACGTGCAGAGTATCTTGGAGGTTCTTCAACTCCTGTGAATATTTCTCCGATT 1220 | || |||||| |||| ||||| || ||| | | | | |||||| || ||| Sbjct 3432 CGTTTACAACGTCCAGAATATCTCGGCGGTGGAACTATGCACTTAAATATTAACCCTATT 3491 Query 1221 CCACAGACTTCCTCAACAGA--CT-CCACATCTCCTCAAGGAAATCTTGCTGCTTATGGT 1277 | || | || | || || || | |||||||||| || ||||| ||| ||| Sbjct 3492 GCTCAAAACTCTGCTACTGATGCTGGTGGAACTCCTCAAGGTAACCTTGCCGCTATGGGT 3551 Query 1278 ACAGCGATTGGATCGAAGCGAGTCTTCACAAAGTCTTTCACAGAGCATGGTGTAATTCTT 1337 || ||| || | | || | ||| ||||| || || |||| | | || Sbjct 3552 ACTTTCCAAGGAAACAACCTTGGTTTTATAAAATCTTTTACTGAACATGAACTGGTCTTT 3611 Query 1338 GGATTAGCCTCTGTACGTGCCGATCTCAACTATCAGCAAGGTTTGGATAGGATGTGGTCA 1397 || || |||| ||||| ||||| ||||| || |||||| | | | |||||| | Sbjct 3612 GGTTTTATTTCTGCTCGTGCTGATCTTAACTACCAACAAGGTCTTAACCGTATGTGGACT 3671 Query 1398 CGAAGAACGCGCTGGGACTTTTATTGGCCTGCTCTTAGCCATTTAGGTGAGCAAGCTGTG 1457 || ||| |||| || ||| ||||| || || | | |||||||||||| | Sbjct 3672 CGCCAAACTCGCTTCGATCATTACTGGCCGTCTTTTGCTAACCTCGGTGAGCAAGCTATC 3731 Query 1458 CTCAATAAAGAGATTTAT 1475 || || || || |||||| Sbjct 3732 CTTAACAAGGAAATTTAT 3749 >seq36439 Length=4110 Score = 98.7 bits (108), Expect = 3e-17 Identities = 199/295 (67%), Gaps = 3/295 (1%) Strand=Plus/Plus Query 1524 GATGAGCAAGTCTTTGGATATCAGGAGAGATTTGCGGAGTATCGCTATAAGACTTCGAAA 1583 |||||| || |||||||||||||| ||| ||| || ||||| ||||| | || || Sbjct 1218 GATGAG---GTGTTTGGATATCAGGAACGATATGCAGAATATCGTTATAAACCATCACAA 1274 Query 1584 ATTACTGGGAAGTTCCGATCAAATGCTACAGGTTCTTTAGATGCATGGCATTTAGCTCAG 1643 ||||| || ||| | || ||||| | | ||||| ||| | |||||||| | ||| Sbjct 1275 ATTACAGGTGCTTTCAGGTCGGATGCTTCGGCGTCTTTGGATACTTGGCATTTGTCCCAG 1334 Query 1644 CAGTTTGAGAATCTTCCAACACTTTCTCCAGAGTTTATCGAAGAAAATCCTCCTATGGAT 1703 | || | | ||||| | || | || || || |||||||| || || ||| Sbjct 1335 GACTTCGGTTCGTTGCCAACGTTGAATCAAACATTCATTGAGGAAAATCCGCCCATTGAT 1394 Query 1704 CGTGTTGTTGCTGTAGATACTGAGCCAGATTTTCTCTTAGATGGTTGGTTTTCATTGCGT 1763 ||||| |||| | |||||| ||| | || | || |||| || ||| | | Sbjct 1395 CGTGTGATTGCAACACCTACTGAACCACACATTATTTTTGATGCTTTCTTTAACCTTCAG 1454 Query 1764 TGTGCAAGACCAATGCCTGTCTATTCTGTTCCAGGCCTCATTGATCATTTCTAAT 1818 ||||| | || ||||| | || ||||||||||| || ||||| || |||| || Sbjct 1455 TGTGCTCGGCCGATGCCGATGTACTCTGTTCCAGGTCTTATTGACCACTTCTGAT 1509 >seq8165 Length=2345 Score = 91.5 bits (100), Expect = 4e-15 Identities = 194/297 (65%), Gaps = 36/297 (12%) Strand=Plus/Minus Query 1349 TGTACGTGCCGATCTCAACTATCAGCAAGGTTTGGATAGGATGTGGTCACGAAGAACGCG 1408 ||| || || ||| | | ||||||||||| | |||||||| || || | ||| Sbjct 967 TGTTCGGGCTGATTTAACTTATCAGCAAGGGATTCCTAGGATGTTTTCTAGATCAGAGCG 908 Query 1409 CTGGGACTTTTATTGGCCTGCTCTTAGCCATTTAGGTGAGCAAGCTGTGCTCAATAAAGA 1468 | || || ||||||||||||||| ||| | || ||||| || | || |||||||| Sbjct 907 TTTCGATTTATATTGGCCTGCTCTTGCTCATCTTGGAGAGCAGTCTATTCTTAATAAAGA 848 Query 1469 GATTTATTGCCAAGGTCCTGCAGTTAAGGATGCTCAGAATGGTAATGTTGTTGTGGATGA 1528 ||||||| |||||| || ||| | | |||| Sbjct 847 GATTTATGCTCAAGGTACTTCAGCTGATGATG---------------------------- 816 Query 1529 GCAAGTCTTTGGATATCAGGAGAGATTTGCGGAGTATCGCTATAAGACTTCGAAAATTAC 1588 |||| |||||||||||||| | | || |||||| | ||| | | || |||||||| Sbjct 815 --AAGTTTTTGGATATCAGGAACGCTGGGCTGAGTATAGGTATTATCCGTCAAAAATTAC 758 Query 1589 TGGGAAGTTCCGATCAA---ATGCTACAGGTTCTTTAGATGCATGGCATTTAGCTCA 1642 ||| | || ||||| | |||| ||| |||||||||| ||||||||| |||| Sbjct 757 TGGACAATTGCGATCTACTTATGCGACA---TCTTTAGATGTATGGCATTTGTCTCA 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14353683046710