Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_013027.1 Length=2782 Score E Sequences producing significant alignments: (Bits) Value seq170627 98.7 2e-17 >seq170627 Length=2270 Score = 98.7 bits (108), Expect = 2e-17 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 589 CTTTGTGTATTGTGGACCCACTGGTACTGGTAAGTCCCGAAGAGCCTGGGCAGAAGCCGG 648 ||| || ||||| ||| | || || ||||| || || | | ||||||| ||||| Sbjct 1726 CTTCGTCTATTGGGGAGCAACGGGCACTGGCAAATCAAAACGCGCCTGGGAGGAAGCGAC 1667 Query 649 TATGGATGCTTATCCTAAAGATCCACGAACCAAATTCTGGGACGGCTATCGAGATCAAAA 708 | ||||||||||| || || || | |||||||||||||| || |||| |||| | Sbjct 1666 CTTCGATGCTTATCCCAAGGACCCCAACTCGAAATTCTGGGACGGTTACCGAGGTCAAGA 1607 Query 709 GCATGTTGTCGTTGATGAATTTCGAGGAGCTATTGACATCTCCCATATACTTAGATGGCT 768 || || | ||||||||| |||| || || |||| || || || |||||||| Sbjct 1606 ATCGGTGGTTATCGATGAATTTAGAGGCGCAATCAGCATCAGTCACATGCTCAGATGGCT 1547 Query 769 CGATCGGTACCCTACTCTTGTGGAGATCAAAGGATCT 805 ||||| ||||| || | || || || ||||| ||| Sbjct 1546 GGATCGTTACCCAACCATCGTTGAAATTAAAGGGTCT 1510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8773824505855