Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_023427.1 Length=2668 Score E Sequences producing significant alignments: (Bits) Value seq170627 91.5 2e-15 >seq170627 Length=2270 Score = 91.5 bits (100), Expect = 2e-15 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 665 TACTGGGGTCCAACTGGTACTGGCAAGTCGCTGCGATCCTCGCGGGAAGCTGGTATCGAC 724 || ||||| |||| || |||||||| || || ||| | |||||| |||| Sbjct 1719 TATTGGGGAGCAACGGGCACTGGCAAATCAAAACGCGCCTGGGAGGAAGCGACCTTCGAT 1660 Query 725 GCTTACTATAAAGACCCTAGGACGAAATTCTGGTGCGGTTATCGCGGTCAACAACATGTT 784 ||||| || ||||| | ||||||||||| |||||| || |||||| || || Sbjct 1659 GCTTATCCCAAGGACCCCAACTCGAAATTCTGGGACGGTTACCGAGGTCAAGAATCGGTG 1600 Query 785 ATTGTCGATGAATTTCGAGGTGCTATCGACATCTCCCACCTGCTTAGATGGCTTGACCGG 844 || ||||||||||| |||| || ||| |||| ||| |||| |||||||| || || Sbjct 1599 GTTATCGATGAATTTAGAGGCGCAATCAGCATCAGTCACATGCTCAGATGGCTGGATCGT 1540 Query 845 TACCC 849 ||||| Sbjct 1539 TACCC 1535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8413360456044