Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_023428.1 Length=2398 Score E Sequences producing significant alignments: (Bits) Value seq170627 87.8 3e-14 >seq170627 Length=2270 Score = 87.8 bits (96), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 625 TGGGGTTCGACTGGCACTGGGAAATCTAGAACTGCATGGGAACAAGCCGGTATGGATGCT 684 ||||| | || |||||||| ||||| | | || ||||| |||| | |||||| Sbjct 1716 TGGGGAGCAACGGGCACTGGCAAATCAAAACGCGCCTGGGAGGAAGCGACCTTCGATGCT 1657 Query 685 TATTGTAAAGATCCAAGATCCAAGTTCTGGGATGGCTATTGTAGTCAGGAAAATGTTGTT 744 ||| || || || | || || |||||||| || || | |||| ||| || ||| Sbjct 1656 TATCCCAAGGACCCCAACTCGAAATTCTGGGACGGTTACCGAGGTCAAGAATCGGTGGTT 1597 Query 745 ATCGATGAATTTAGAGGAGGGATTGACATCTCCCACATTCTTAGATGGCTCGACAGGTAC 804 ||||||||||||||||| | || |||| ||||| || |||||||| || | ||| Sbjct 1596 ATCGATGAATTTAGAGGCGCAATCAGCATCAGTCACATGCTCAGATGGCTGGATCGTTAC 1537 Query 805 CCGGTACGA--GTGGAAATCAAAGGATCTTC 833 || || | || ||||| ||||| ||||| Sbjct 1536 CC--AACCATCGTTGAAATTAAAGGGTCTTC 1508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7550943097224