Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_025722.1 Length=2834 Score E Sequences producing significant alignments: (Bits) Value seq171168 123 4e-25 seq170627 82.4 1e-12 >seq171168 Length=2613 Score = 123 bits (136), Expect = 4e-25 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 594 TTCTACGGTGTCTCTGGCTCTGGTAAATCGAGAAGAGCCTGGGACGAAGCGGGCGTCGAA 653 |||| || ||| |||| || ||||| | ||||||||||||| || || |||| Sbjct 562 TTCTGGGGCGTCACTGGGAGCGGCAAATCACGTCGAGCCTGGGACGAGGCCGGTCTCGAC 503 Query 654 GCTTATTCTAAAGACCCAAGGTCTAAGTTCTGGTGTGGTTATCAAGGTCAATCAAACGTT 713 |||| |||| || || |||| || || ||| |||||| | |||||| | | ||| Sbjct 502 GCTTTCCCTAAGGATCCTCGGTCCAAATTTTGGGATGGTTACCGAGGTCACGCGCATGTT 443 Query 714 GTGCTCGATGAATTTCGAGGAGGAATCGATGTGGCCCACCTCCTCAGGTGGTTCGACCGT 773 || ||||||| |||||||| ||||||||||| ||||| ||| | | |||||||| || Sbjct 442 GTTATCGATGAGTTTCGAGGTGGAATCGATGTCGCCCATCTCTTGCGATGGTTCGATCGA 383 Query 774 TATCCTGTGCGTGTGGAGATCAAAGG 799 ||||||||| || ||| | ||||| Sbjct 382 TATCCTGTGGTCGTCGAGGTTAAAGG 357 >seq170627 Length=2270 Score = 82.4 bits (90), Expect = 1e-12 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 609 GGCTCTGGTAAATCGAGAAGAGCCTGGGACGAAGCGGGCGTCGAAGCTTATTCTAAAGAC 668 ||| |||| ||||| | | | |||||||| |||||| | |||| |||||| | || ||| Sbjct 1704 GGCACTGGCAAATCAAAACGCGCCTGGGAGGAAGCGACCTTCGATGCTTATCCCAAGGAC 1645 Query 669 CCAAGGTCTAAGTTCTGGTGTGGTTATCAAGGTCAATCAAACGTTGTGCTCGATGAATTT 728 || | || || |||||| ||||| | ||||||| | || || ||||||||||| Sbjct 1644 CCCAACTCGAAATTCTGGGACGGTTACCGAGGTCAAGAATCGGTGGTTATCGATGAATTT 1585 Query 729 CGAGGAGGAATCGATGTGGCCCACCTCCTCAGGTGGTTCGACCGTTATCC 778 |||| | |||| | ||| | ||||| ||| | || ||||| || Sbjct 1584 AGAGGCGCAATCAGCATCAGTCACATGCTCAGATGGCTGGATCGTTACCC 1535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8939910736035