Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_026258.1 Length=2042 Score E Sequences producing significant alignments: (Bits) Value seq171168 98.7 1e-17 >seq171168 Length=2613 Score = 98.7 bits (108), Expect = 1e-17 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 718 TGGGAGCTGGCAGGTGAAGACGCCTATCCTAAATGTCCTAACTCCAAGTTTTGGGATGGC 777 ||||| ||| ||| ||||| | ||||| |||| ||||| ||||||||||| Sbjct 523 TGGGACGAGGCCGGTCTCGACGCTTTCCCTAAGGATCCTCGGTCCAAATTTTGGGATGGT 464 Query 778 TATCGTGGTCATACGAATGTTGTCATTGATGAATTTCGTGGACGAATTGATATCTCACAT 837 || || ||||| || ||||||| || ||||| ||||| || |||| ||| || | ||| Sbjct 463 TACCGAGGTCACGCGCATGTTGTTATCGATGAGTTTCGAGGTGGAATCGATGTCGCCCAT 404 Query 838 ATCCTCCGATGGTTCGACCGTTATCCAGTTCTGGTTGAAATTAAAGG 884 || | ||||||||||| || ||||| || | || || ||||||| Sbjct 403 CTCTTGCGATGGTTCGATCGATATCCTGTGGTCGTCGAGGTTAAAGG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6413829838928