Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_026267.1 Length=2605 Score E Sequences producing significant alignments: (Bits) Value seq171168 93.3 7e-16 >seq171168 Length=2613 Score = 93.3 bits (102), Expect = 7e-16 Identities = 137/193 (71%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 1616 ATATCTGTCCAACCAT---AAGAGAAGGTACGCGACATCAATTCCTCCTCGAAACTCATC 1672 ||||| || |||||| |||||| || |||||||| ||||| |||||||||||||| Sbjct 380 ATATCGATCGAACCATCGCAAGAGATGG---GCGACATCGATTCCACCTCGAAACTCATC 436 Query 1673 AATGACAACGTTCTTTTGACCAGCGTATCCGTCCCACCATTTAGTTCGCGGATTTTTAAC 1732 || ||||| | | ||||| ||| || ||||| |||| | || |||| ||| Sbjct 437 GATAACAACATGCGCGTGACCTCGGTAACCATCCCAAAATTTGGACCGAGGATCCTTAGG 496 Query 1733 GTAACACTCCATTCCGGCTTCTTCAAAGGCTCGACGCGACTTACCAGTTCCAGTGAGTCC 1792 | || || | ||||| || || |||||||||| || || || | ||||||| || Sbjct 497 GAAAGCGTCGAGACCGGCCTCGTCCCAGGCTCGACGTGATTTGCCGCTCCCAGTGACGCC 556 Query 1793 CCAAAAGACTTTA 1805 ||| || || ||| Sbjct 557 CCAGAACACGTTA 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8212129738986