Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_026277.1 Length=2711 Score E Sequences producing significant alignments: (Bits) Value seq171168 145 1e-31 >seq171168 Length=2613 Score = 145 bits (160), Expect = 1e-31 Identities = 153/200 (77%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 1810 TCGACAATTACTGGGTACCGATCCAGCCATCGTAAAAAGTGCGAGACATCGATTCCACCT 1869 ||||| | || || || ||||| | |||||| || | || | |||||||||||||||| Sbjct 366 TCGACGACCACAGGATATCGATCGAACCATCGCAAGAGATGGGCGACATCGATTCCACCT 425 Query 1870 CGAAATTCATCGATGACAACATGTTCATGACCTCGATAGCCGCACCAAAATTTACTGCGC 1929 ||||| |||||||| |||||||| | |||||||| || || ||||||||| || Sbjct 426 CGAAACTCATCGATAACAACATGCGCGTGACCTCGGTAACCATCCCAAAATTTGGACCGA 485 Query 1930 GGACACTTAGGGTAAGCGTCCAGTCCAGCTTCGGCCCAAGCACGGCGGGATTTGCCGGTG 1989 ||| ||||||| ||||||| || || || ||| |||| || || || ||||||||| | Sbjct 486 GGATCCTTAGGGAAAGCGTCGAGACCGGCCTCGTCCCAGGCTCGACGTGATTTGCCGCTC 545 Query 1990 CCAGCATCGCCCCAGTAACA 2009 |||| |||||||| |||| Sbjct 546 CCAGTGACGCCCCAG-AACA 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8550708405782