Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_027638.1 Length=4671 Score E Sequences producing significant alignments: (Bits) Value seq39523 80.6 8e-12 >seq39523 Length=7581 Score = 80.6 bits (88), Expect = 8e-12 Identities = 153/224 (68%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 76 ACCTTTGATCTTTCCTATGATGTGAAGACTTCGTTTAATATTGGTGAGTTAATTCCTATT 135 ||||||||| | || ||||||| ||||| |||||| ||| || |||||| ||||| || Sbjct 4134 ACCTTTGATTTATCGCATGATGTAAAGACATCGTTTCGTATGGGCGAGTTAGTTCCTGTT 4075 Query 136 GGTTGTTGGGAGGCGTTACCTGGTGATAGATTTAATTGTCAGTCTGAGGCTCTTGTTAGA 195 |||| || | | ||||| ||||| || | | | || |||| | | | Sbjct 4074 TTTTGTACTGATGTTGTTCCTGGCGATAGTTTCACTATTAAGCCTGAAAACATGCTCCGT 4015 Query 196 TTTGCTCCTATGCTTGCTCCTATAATGCAGCGTCTTAATCTTCGCCTTGAGTATTTCTTT 255 ||||| ||| | || | ||| | ||||| ||| || | | | | | |||| ||| Sbjct 4014 TTTGCCCCTCTCGTTTCCCCTGTGATGCATCGTGTTGTTGT---CACTACGCATTTTTTT 3958 Query 256 ---GTCCCTAATCGTATTTTGTGGTCAGACTGGGAAGATTTTAT 296 || |||||||||||| | ||| | || |||||||||||||| Sbjct 3957 ATGGTGCCTAATCGTATTCTCTGGCCTGAGTGGGAAGATTTTAT 3914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14807226213740