Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_027642.1 Length=4624 Score E Sequences producing significant alignments: (Bits) Value seq172227 264 3e-67 seq172207 241 4e-60 seq117558 206 8e-50 seq171756 176 1e-40 seq59597 159 1e-35 seq8165 118 3e-23 seq62978 114 4e-22 seq172181 107 6e-20 seq160671 86.0 2e-13 >seq172227 Length=4743 Score = 264 bits (292), Expect = 3e-67 Identities = 698/1049 (67%), Gaps = 70/1049 (7%) Strand=Plus/Minus Query 373 GGTATTCCTACTGCTGTGGTTAATCTTACGCACGATAATCTTTTTCC---TCGGGCGTAT 429 ||||| ||||||| ||| | ||| | | | |||| ||||| ||| || ||| Sbjct 1314 GGTATCCCTACTGGTGTAGAAAATTTGTCA---GTTAATAATTTTCACGGTCGTGCATAT 1258 Query 430 AATTTGATTTGGAATCAGTGGTTTCGTGATCAGAATTTGCAGAATT----CTGTTGTTGT 485 ||| | |||| ||| ||||||| ||||| ||||| || |||| ||| |||||| Sbjct 1257 AATCTTATTTATAATGAGTGGTTCCGTGACCAGAACTT----AATTGACCCTGCTGTTGT 1202 Query 486 CGATATGGGTGACGGTCCTGATAATCCGGCTAATTATGTTTTGTTGAGGCGCGGTAAGCG 545 || | | ||| | |||| |||| ||| | ||||| | | ||||||||||| Sbjct 1201 TGACACTGATGATTCTAATGATGATCCTGCTGACTATGTAATCCGTCGTCGCGGTAAGCG 1142 Query 546 CCATGATTATTTTACGGCGTCGTTGCCTTGGCCTCAGAAGGGTCCGTCTGTTTCTATTCC 605 |||||||| ||||| | | |||||||||||||| |||||| | |||||| | || Sbjct 1141 ACATGATTACTTTACTTCTTGTTTGCCTTGGCCTCAAAAGGGTGATGCGGTTTCTTTGCC 1082 Query 606 TCTTGGCGGTACGGCTCCTGTTATCGGTATCGGTGGTTCGGGTGCTGCGTCGGCGTTGCC 665 ||||| | || |||||| ||| ||| | ||| ||| || | ||||| Sbjct 1081 GCTTGGTGATAAAGCTCCT---ATCCATATTGAAGGTGACGGTTCTACCAACTCGTTGGT 1025 Query 666 GGGTAGTACTTATTTTCAGAC-TGAC--GGTACTACTCTGTCTGGCGCTGGTGTTGTAGC 722 ||| ||| || | ||| || || | || | |||| || ||| | | Sbjct 1024 TGGTC-------TTTACAACCGTGATTTGGGAC-AGAATG---GTCGCTTGT-TTG-ACC 978 Query 723 GTCGAC--GGT--TAATGAGGTTGCTATTCGCGCTACTGCTGCTGGTGCTTTTAGTGCGT 778 || | ||| |||| | ||||| || | |||||||| || || | || | Sbjct 977 GTAGTTCTGGTACTAATAATATTGCTGTTTCTGGTACTGCTGGTGCTGAAGATGATGAG- 919 Query 779 CGAATCCTCCGCAGATTTTTGCGAATTTGGCGACTGCTACTGCGGCTACTATTAACCAGC 838 || ||| ||||| ||||| | |||||||||| | ||||| || | | Sbjct 918 ---AT--------GATGTTTGCTGATTTGACTTCTGCTACTGCTTCAACTATCAATGAAC 870 Query 839 TTCGTCAGGCTTTTCAGATACAGAAGATTTATGAGA--GGGATGCCCGTGGAGGTACGCG 896 ||||| | || |||||||| || || | | | ||| | || || | || ||||| || Sbjct 869 TTCGTGAAGCGTTTCAGATTCA--AGGTCTCTTAGAACGTGACGCTAGAGGCGGTACACG 812 Query 897 TTATACGGAGCTTATTCAGGCTCACTTTGGCGTCACTTCTCCTGACGCTCGTTTGCAGCG 956 ||| || ||| ||||| || | || ||||| || ||| ||| || ||| |||| || Sbjct 811 TTACACAGAGATTATTAAGTCCCATTTTGGTGTTACTAGTCCGGATTATCGCATGCAACG 752 Query 957 TGCTGAGTATCTCGGTGGTGGTTCTACTCCCATTAATGTTAATCCTATTGCGCAGACGCA 1016 | |||||||||| || || |||||||| || | |||||||| |||||||||| || Sbjct 751 TCCTGAGTATCTTGGAGGCGGTTCTACACCGTTGCATGTTAATGCTATTGCGCAAACTTC 692 Query 1017 AGGTACTGGGGCGTCTGGCACGACTACACCGCAGGGTAATCTGGCCGCTATTGGTACTAT 1076 ||||| || || || || || |||||| |||| ||||| | ||| | Sbjct 691 TTCTACTGATGCTACTAGC---------CCACAAGGTAATTTGGCGGCTATGGCTACCGT 641 Query 1077 GTCACATAGAGGCGTCGGTTTTACTAAGTCGTTTACCGAGCATTGTCTGCTAATTGGT-T 1135 | | | || |||||| ||||||||||||| ||||||||| | | |||||| | Sbjct 640 TCAAGTTCGTGGACATGGTTTTGCTAAGTCGTTTACTGAGCATTGTGTTATTATTGGTCT 581 Query 1136 TGTTGGAGGTTACTGCTGATTTGTCTTATCAGCAGGGTCTTGAACGTATGTGGTCTCGTC 1195 || | | | || |||||||||| ||||||||| |||||| | |||||||||||||| | Sbjct 580 TGCTAGTG-TTCGTGCTGATTTGAATTATCAGCAAGGTCTTAACCGTATGTGGTCTCGCC 522 Query 1196 AAACGCGGTTTGATTTTTTCTGGCCCGCGTTGGCGCAGATTGGTGAGCAGGCGGTGCTCA 1255 | || || | |||||| | | || || | || || ||||||| || || || | | Sbjct 521 AGACTCGCTATGATTTCTATTATCCTGCACTTGCACACCTTGGTGAACAAGCTGTTTTGA 462 Query 1256 ATCAAGAGATTTGTATGGTTGGCGGTGCT-ACG--GATACCCAGATTTGGGGGTATCAGG 1312 | | || |||| | || ||| |||| | | ||||| ||| || ||||||| Sbjct 461 GTAAGGAAATTTATGCGGACGGCTCTGCTGATGACGATAC---TGTTTTTGGTTATCAGG 405 Query 1313 AGCGTTATGCTGAGTATCGGTATAAGCCGTCTCGTATTTGCGGTCAGTTTCGGAGTTCGT 1372 | ||||||||||| ||||| |||||||| ||| ||| |||||||| || ||| | | Sbjct 404 AACGTTATGCTGAATATCGCTATAAGCCCTCTTTGATTACTGGTCAGTTCCGTAGTACTT 345 Query 1373 ATACGGCGCCGTTGGATAGTTGGCATTTG 1401 || || | |||||| |||||||||| Sbjct 344 ATTCGCAATCTTTGGATGCTTGGCATTTG 316 Score = 84.2 bits (92), Expect = 6e-13 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 25 CCTAAGGCTTCTATTCCGCGTTCTACGTTTGACAGGTCTCACGGTATGAAGGCTACTTTC 84 ||| | ||| |||| || |||| |||| | | ||||| ||| ||| ||||||| Sbjct 1659 CCTGATGCTCGTATTAATCGCTCTAAGTTTAATCGTTCTCATGGTCACAAGACTACTTTT 1600 Query 85 GATAGTGGTTATTTGATTCCTATTTATGTCGATGAGGCTTTGCCGGGTGATACGTTCAAT 144 || |||| ||||| ||||||||| || ||||||| ||| || |||||||||||||| Sbjct 1599 AATGCTGGTGATTTGGTTCCTATTTTGGTTGATGAGGTTTTACCTGGTGATACGTTCAA- 1541 Query 145 CTG---AGTTTAACTACGTTTGCTCGTTTGTCTACGCC 179 ||| |||| | | | |||| ||| ||| |||| || Sbjct 1540 CTGTAAAGTTGA--TGCTTTTGGTCGCTTGGCTACTCC 1505 Score = 82.4 bits (90), Expect = 2e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 3266 TGTGGTCAGTGTGTTGGTTGTAGATTGGAGAAGTCGCGTCAGTGGGCGATGCGTTGTATG 3325 |||||||| |||||||||||| | ||||| || | |||||||| ||||||||||| Sbjct 2835 TGTGGTCAATGTGTTGGTTGTCGTTTGGAACGTTCTAGGCAGTGGGCAATGCGTTGTATT 2776 Query 3326 CATGAGAAGAAGTTGCATAATAATAATTGTTTTATTACGTTGACTTATGACAACGATCAT 3385 |||||| | || ||| ||||||||| |||| ||||||| ||| || || ||| Sbjct 2775 CATGAGGCTTCCCTTTATGATAGAAATTGTTTTGTTACTTTGACTTTTGATAATGAACAT 2716 Query 3386 TTG 3388 || Sbjct 2715 CTG 2713 >seq172207 Length=4585 Score = 241 bits (266), Expect = 4e-60 Identities = 529/785 (67%), Gaps = 17/785 (2%) Strand=Plus/Minus Query 803 ATTTGGCGACTGCTACTGCGGCTACTATTAACCAGCTTCGTCAGGCTTTTCAGATACAGA 862 ||||| | |||||||| || || | ||||| | | ||||| |||| |||||||| |||| Sbjct 4048 ATTTGTCCACTGCTACGGCTGCAAGTATTAGCGATATTCGTGAGGCATTTCAGATTCAGA 3989 Query 863 AGATTTATGAGAGGGATGCCCGTGGAGGTACGCGTTATACGGAGCTTATTCAGGCTCACT 922 | | |||| | ||||| || || ||||| || ||||| || | || ||||| || | Sbjct 3988 AATTGCTTGAGCGTGATGCGCGAGGTGGTACACGGTATACTGAAATCATCCAGGCACATT 3929 Query 923 TTGGCGTCACTTCTCCTGACGCTCGTTTGCAGCGTGCTGAGTATCTCGGTGGTGGTTCTA 982 | || || ||||| |||||| || |||| | | || || ||||| || || || | Sbjct 3928 TCGGAGTAACTTCAGATGACGCACGACTGCAAAGACCGGAATACCTCGGAGGCGGCTCGA 3869 Query 983 CTCCCATTAATGTTAATCCTATTGCGCAGACGCAAGGTACTGGGGCGTCTGGCACGACTA 1042 | || || |||||| |||||| | ||||| | || | ||| | | || | Sbjct 3868 CGCCGATCAATGTTTCGCCTATTCCTCAGAC------TTCTT---CAACTGACGCAACAA 3818 Query 1043 CACCGCAGGGTAATCTGGCCGCTATTGGTACTATGTCACATAGAGGCGTCGGTTTTACTA 1102 | || || |||||| |||| |||||||||||| || ||| || ||||||| || Sbjct 3817 CTCCTCAAGGTAATTTGGCTGCTATTGGTACTGCTTCTTTTAGCGGTCATGGTTTTAGTA 3758 Query 1103 AGTCGTTTACCGAGCATTGTCTGCTAATTGGT-TTGTTGGAGGTTACTGCTGATTTGTCT 1161 |||| || |||||||| | | | || ||| ||||| | | ||| || ||||| | Sbjct 3757 AGTCTTTCACCGAGCACAATATTATCATCGGTCTTGTTAGTG-TTAGAGCAGATTTAACC 3699 Query 1162 TATCAGCAGGGTCTTGAACGTATGTGGTCTCGTCAAACGCGGTTTGATTTTTTCTGGCCC 1221 ||||||||||| || | || |||||||| || ||| || | |||||||| ||||||| Sbjct 3698 TATCAGCAGGGACTAAACCGGATGTGGTCCCGGCAAGGCCGTTATGATTTTTACTGGCCC 3639 Query 1222 GCGTTGGCGCAGATTGGTGAGCAGGCGGTGCTCAATCAAGAGATTTGTATGGTTGGCGGT 1281 ||| | || || |||||||||||||||||||| ||| |||| |||| || Sbjct 3638 GCGCTCGCTCATATTGGTGAGCAGGCGGTGCTTAATAAAGAAATTTACGCACAAGGGACA 3579 Query 1282 GCTACGGATACCCAGATTTGGGGGTATCAGGAGCGTTATGCTGAGTATCGGTATAAGCCG 1341 || ||| | | | | || || ||||||||||| || || || || ||||||||| Sbjct 3578 GCAGATGATGACGAAGTGTTTGGATACCAGGAGCGTTACGCAGAATACCGCTATAAGCCG 3519 Query 1342 TCTCGTATTTGCGGTCAGTTTCGGAGTTCGTATACGGCGCC--GT-TGGATAGTTGGCAT 1398 || | || |||| |||| | || || | | || | || | || | ||||| Sbjct 3518 TCGCAGATCAGCGGAGCGTTTAGAAG--CGCA-GCAGCAACAAGTCTTGACACGTGGCAC 3462 Query 1399 TTGTCGCAATACTTTACGACTCTTCCGGCGCTTAATTCGACTTTTATTCAGGATGCTCCG 1458 | || ||| | ||| | | | || | ||||| | | || || | || ||| Sbjct 3461 CTCTCACAAGATTTTGCCTCCTTACCAGTCCTTAACAAGGCGTTCATCGAAGAAAACCCG 3402 Query 1459 CCTATTTCGCGGATTGTTGCGGTGCCTTCGCAACCGCAGTTTTTGTTGGATTGTTATTTC 1518 || || ||| | | || || ||||||| ||| | || || | ||||||| Sbjct 3401 CCGATCGATCGGGTGATCGCTACACCGAGCGAACCGCATTTTATCTTCGACTCTTATTTC 3342 Query 1519 AATTTGAAGTGCTCTCGGCCCATGCCGGTGTATGGTGTGCCTGGTAACATTGATCGTTTC 1578 |||||||||||| | || || |||||||| |||| |||||||| ||| || | ||| Sbjct 3341 AATTTGAAGTGCGCGCGTCCGATGCCGGTCTATGCGGTGCCTGGACTCATGGACCACTTC 3282 Query 1579 TAAGG 1583 ||||| Sbjct 3281 TAAGG 3277 Score = 104 bits (114), Expect = 7e-19 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 37 ATTCCGCGTTCTACGTTTGACAGGTCTCACGGTATGAAGGCTACTTTCGATAGTGGTTAT 96 |||||||| ||| | || || | || ||||| || | ||||||||| || | Sbjct 239 ATTCCGCGGTCTTCCTTCAACCGTTCACACGGGCACAAAACGACTTTCGATGCCGGAAAG 180 Query 97 TTGATTCCTATTTATGTCGATGAGGCTTTGCCGGGTGATACGTTCAATCTGAGTTTAACT 156 |||| || |||||||| |||||||| |||| |||||||||||||| ||| | | | Sbjct 179 CTGATCCCGATTTATGTAGATGAGGCGCTGCCAGGTGATACGTTCAACATGAATATGTCA 120 Query 157 ACGTTTGCTCGTTTGTCTACGCCGTTGCATCCTGTAATGGATAATAT 203 | ||||| ||| || | ||||| |||||||| || ||||||||||| Sbjct 119 GCTTTTGCGCGTATGGCAACGCCATTGCATCCGGTCATGGATAATAT 73 >seq117558 Length=7756 Score = 206 bits (228), Expect = 8e-50 Identities = 512/770 (66%), Gaps = 19/770 (2%) Strand=Plus/Minus Query 815 CTACTGCGGCTACTATTAACCAGCTTCGTCAGGCTTTTCAGATACAGAAGATTTATGAGA 874 ||||||| || || ||||| | || || | || || ||| | ||||| || || Sbjct 5075 CTACTGCTGCAACGATTAATGATCTGCGCGAAGCGTTCCAGGTTCAGAAAATGCTCGAAC 5016 Query 875 GGGATGCCCGTGGAGGTACGCGTTATACGGAGCTTATTCAGGCTCACTTTGGCGTCACTT 934 | ||||| ||| ||||| | || |||||| |||||||||| || || || || || | Sbjct 5015 GTGATGCTCGTTCTGGTACCAGGTACACGGAGATTATTCAGGCCCATTTCGGTGTAACCT 4956 Query 935 CTCCTGACGCTCGTTTGCAGCGTGCTGAGTATCTCGGTGGTGGTTCTACTCCCATTAATG 994 ||||||| |||||| | ||||| |||| || ||||| ||||||||| | |||||| Sbjct 4955 CTCCTGATGCTCGTCTCCAGCGCCCTGAATACCTCGGCGGTGGTTCTTCCAGGATTAATA 4896 Query 995 TTAATCCTATTGCGCAGACGCAAGGTACTGGGGCGTCTGGCACGACTACACCGCAGGGTA 1054 || || || | || ||| || | || ||| ||||||| || || |||| Sbjct 4895 TTTCGCCGGTTCCTCAAACG--AGTT-------CGACTGATGCGACTACTCCTCAAGGTA 4845 Query 1055 ATCTGGCCGCTATTGGTACTATGTCACATAGAG-GCGTCGGTTTTACTAAGTCGTTTACC 1113 |||| || | | |||||||| | | | | || || ||||| || ||||| ||||| Sbjct 4844 ATCTCGCTGGTTTTGGTACTGT-TGGCTTTGATCGCCATGGTTTCACCAAGTCTTTTACT 4786 Query 1114 GAGCATTGTCTGCTAATTGGTTT-GTTGGAGGTTACTGCTGATTTGTCTTATCAGCAGGG 1172 |||||| ||| | ||||| | | | | | | || || || | ||||| ||||| Sbjct 4785 GAGCATGGTCATATTATTGGCCTCGCTTGCG-TCCGGGCCGACCTGACCTATCAACAGGG 4727 Query 1173 TCTTGAACGTATGTGGTCTCGTCAAACGCGGTTTGATTTTTTCTGGCCCGCGTTGGCGCA 1232 ||| | ||||||||||| || || |||| || |||| ||||| |||||||| || Sbjct 4726 CCTTAACCGTATGTGGTCCCGGCAGGACCGGTACGACTTTTATTGGCCGGCGTTGGCCCA 4667 Query 1233 GATTGGTGAGCAGGCGGTGCTCAATCAAGAGATTTGTATGGTTGGCGGTGCTACGGATAC 1292 |||||||||||||||| | ||| | ||||||| | || || | | || Sbjct 4666 CCTTGGTGAGCAGGCGGTATTGAATAAGGAGATTTTTGCTCAAGGGAGTTCCGCCGACGA 4607 Query 1293 CCAGATTTGGGGGTATCAGGAGCGTTATGCTGAGTATCGGTATAAGCCGTCTCGTATTTG 1352 || | | || ||||||||||||||||| || || ||||| || || |||| ||| Sbjct 4606 TGAGGTGTTTGGTTATCAGGAGCGTTATGCCGAATACCGGTACAAACCCTCTCAGATTAC 4547 Query 1353 CGGTCAGTTTCGGAGTTCGTATACGG---CGCCGTTGGATAGTTGGCATTTGTCGCAATA 1409 ||| || | | || || ||| || ||||||||| |||||| |||| || | Sbjct 4546 CGGGGCATTCC---GCTCTAATGCGGCGACGTCGTTGGATACCTGGCATCTGTCCCAGGA 4490 Query 1410 CTTTACGACTCTTCCGGCGCTTAATTCGACTTTTATTCAGGATGCTCCGCCTATTTCGCG 1469 ||| | | || | ||| ||| || ||| |||| ||||| || || Sbjct 4489 GTTTGGTTCGTTGCCCGTTCTTGGCAAGACGTTCATTGAGGAAAACCCGCCGGTTGATCG 4430 Query 1470 GATTGTTGCGGTGCCTTCGCAACCGCAGTTTTTGTTGGATTGTTATTTCAATTTGAAGTG 1529 | |||||||||| || | || || | | || || |||| ||| |||||||||| Sbjct 4429 AGTGATTGCGGTGCCCTCCGAGCCCCACATGATCTTTGACGGTTACTTCGATTTGAAGTG 4370 Query 1530 CTCTCGGCCCATGCCGGTGTATGGTGTGCCTGGTAACATTGATCGTTTCT 1579 | ||||| |||||| |||| || || ||| ||||| | ||||| Sbjct 4369 TGCCCGGCCTATGCCGATGTACTCCGTTCCCGGTCTTATTGACCATTTCT 4320 Score = 102 bits (112), Expect = 2e-18 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 803 ATTTGGCGACTGCTACTGCGGCTACTATTAACCAGCTTCGTCAGGCTTTTCAGATACAGA 862 ||||| | | ||| || |||||||| |||||| | || ||| | || |||||| | |||| Sbjct 247 ATTTGACCAATGCAACCGCGGCTACGATTAACGACCTGCGTGAAGCGTTTCAGGTTCAGA 188 Query 863 AGATTTATGAGAGGGATGCCCGTGGAGGTACGCGTTATACGGAGCTTATTCAGGCTCACT 922 | || | ||| ||||||||||| ||||| || || || ||| | || || | || | Sbjct 187 AAATGTTGGAGCGGGATGCCCGTTCCGGTACCCGGTACACTGAGATCATCCAATCCCATT 128 Query 923 TTGGCGTCACTTCTCCTGACGCTCGTTTGCAGCGTGCTGAGTATCTCGGTGGTGGTTCT 981 |||| || || ||||| || || || | ||||| |||| || | || ||||||||| Sbjct 127 TTGGTGTGACGTCTCCGGATGCGCGACTTCAGCGCCCTGAATACTTGGGCGGTGGTTCT 69 Score = 98.7 bits (108), Expect = 3e-17 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 6 TCACATGTTTTC-GCAA-GTCCCTAAGGCTTCTATTCCGCGTTCTACGTTTGACAGGTCT 63 || ||| |||| |||| || || || ||| ||||| |||||| | ||||| | ||| Sbjct 1025 TCCCATAATTTCAGCAATGTGCCGAAAGCTGAGATTCCTCGTTCTTCTTTTGATCGTTCT 966 Query 64 CACGGTATGAAGGCTACTTTCGATAGTGGTTATTTGATTCCTATTTATGTCGATGAGGCT 123 |||||| |||| | || || || ||| | |||||||| |||| ||| ||||||| Sbjct 965 CACGGTCTGAAAACAACGTTTGACGCCGGTAAATTGATTCCGATTTTTGTGGATGAGGTG 906 Query 124 TTGCCGGGTGATACGTTCAATCTGAGTTTAACTACGTTTGCTCGTTTGTCTACGCCGTTG 183 | || ||||||||||| ||| ||| | | || || | ||| ||| | ||||| | Sbjct 905 CTTCCCGGTGATACGTTTAATTTGAATATGACCGGCTTCGGTCGCTTGGCGACGCCACTT 846 Query 184 CATCCTGTAATGGATAATATG 204 ||||| | |||||||||||| Sbjct 845 CATCCGATCATGGATAATATG 825 Score = 89.7 bits (98), Expect = 2e-14 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 61 TCTCACGGTATGAAGGCTACTTTCGATAGTGGTTATTTGATTCCTATTTATGTCGATGAG 120 || |||||| | ||| | || || || |||| | |||| ||||||| ||| |||||| Sbjct 5867 TCACACGGTCTAAAGACGACCTTTGACGCTGGTAAGCTGATCCCTATTTTTGTGGATGAG 5808 Query 121 GCTTTGCCGGGTGATACGTTCAATCTGAGTTTAACTACGTTTGCTCGTTTGTCTACGCCG 180 | | || ||||||||||| ||||||| | | || |||| || ||| |||| ||| Sbjct 5807 GTGCTTCCTGGTGATACGTTTAATCTGAATATGACCGGCTTTGGCCGGTTGGCTACCCCG 5748 Query 181 TTGCATCCTGTAATGGATAATATG 204 | ||||| || |||||||||||| Sbjct 5747 CTCCATCCAGTGATGGATAATATG 5724 >seq171756 Length=3219 Score = 176 bits (194), Expect = 1e-40 Identities = 318/463 (69%), Gaps = 8/463 (2%) Strand=Plus/Minus Query 806 TGGCGACTGCTACTGCGGCTACTATTAACCAGCTTCGTCAGGCTTTTCAGATACAGAAGA 865 || || | ||||| |||| ||||| ||| | || |||||||| |||||| |||| ||| Sbjct 466 TGTCGGCCGCTACGGCGGTGACTATCAACGAACTGCGTCAGGCGTTTCAGGTACAAAAGC 407 Query 866 TTTATGAGAGGGATGCCCGTGGAGGTACGCGTTATACGGAGCTTATTCAGGCTCACTTTG 925 | |||| | ||||| || || |||||||| |||||||| || ||| |||| |||| Sbjct 406 TGCTTGAGCGCGATGCGCGAGGTGGTACGCGGTATACGGAAATTGTTCGTTCTCATTTTG 347 Query 926 GCGTCACTTCTCCTGACGCTCGTTTGCAGCGTGCTGAGTATCTCGGTGGTGGTTCTACTC 985 | ||||| || || ||||| |||||||||||| | || |||||||| || ||| | | Sbjct 346 GTGTCACGTCCCCGGACGCACGTTTGCAGCGTCCGGAATATCTCGGGGGCGGTAGCTCCC 287 Query 986 CCATTAATGTTAATCCTATTGCGCAGACGCAAGGTACTGGGGCGTCTGGCACGACTACAC 1045 | | || | | || ||| ||||| || | || ||| ||||| ||| | Sbjct 286 CGGTCAACATCACGCCAATTCATCAGACTCAGGCAACGCAGGC------CACGATTACGC 233 Query 1046 CGCAGGGTAATCTGGCCGCTATTGGTACTATGTCACATAGAGGCGTCGGTTTTACTAAGT 1105 ||| || |||||| ||| ||||| | | | ||| || || || ||| Sbjct 232 CGCTCGGCGCGTTGGCCGGTATCGGTACGGCGAACCTGAATGGCCATGGGTTCACGCAGT 173 Query 1106 CGTTTACCGAGCATTGTCT-GCTAATTGGTTTGTTGGAGGTTACTGCTGATTTGTCTTAT 1164 |||||||||| || || | | || | || |||| | ||| ||| || || | ||| Sbjct 172 CGTTTACCGAACACTGCATCGTTATTGGGCTTGTCTG-TGTTCGTGCAGACCTGACGTAT 114 Query 1165 CAGCAGGGTCTTGAACGTATGTGGTCTCGTCAAACGCGGTTTGATTTTTTCTGGCCCGCG 1224 |||||||| || | || ||||||||||| || || || | || | | |||||| ||| Sbjct 113 CAGCAGGGCCTCAACCGCATGTGGTCTCGGCAGACCCGCTACGACTACTACTGGCCGGCG 54 Query 1225 TTGGCGCAGATTGGTGAGCAGGCGGTGCTCAATCAAGAGATTT 1267 | || || ||||| || ||||| ||||| ||| | || |||| Sbjct 53 CTCGCTCACATTGGCGAACAGGCCGTGCTGAATAAGGAAATTT 11 >seq59597 Length=4602 Score = 159 bits (176), Expect = 1e-35 Identities = 517/790 (65%), Gaps = 31/790 (4%) Strand=Plus/Plus Query 812 CTGCTACTGCGGCTACTATTAACCAGCTTCGTCAGGCTTTTCAGATACAGAAGATTTATG 871 |||| |||||||| || || ||| |||| ||| | || || ||| |||| || || || Sbjct 2421 CTGCAACTGCGGCAACAATCAACGAGCTGCGTGAAGCGTTCCAGGTACAAAAAATGCTTG 2480 Query 872 AGAGGGATGCCCGTGGAGGTACGCGTTATACGGAGCTTATTCAGGCTCACTTTGGCGTCA 931 || | || || ||| |||||| || || || ||| | || || ||||| ||||| || | Sbjct 2481 AGCGTGACGCTCGTTCAGGTACTCGGTACACTGAGATCATCCAAGCTCATTTTGGTGTGA 2540 Query 932 CTTCTCCTGACGCTCGTTTGCAGCGTGCTGAGTATCTCGGTGGTGGTTCTACTCCCATTA 991 | || || || || | | || || |||| || || ||||| || || || | | | Sbjct 2541 CCTCGCCGGATGCCAGGCTTCAACGCCCTGAATACCTTGGTGGAGGATCAACCCGTGTCA 2600 Query 992 ATGTTAATCCTATTGCGCAGACGCAAGGTACTGGGGCGTCTGGCACGACTACACCGCAGG 1051 | |||||||| | | ||||| | || || || || || || || || | Sbjct 2601 ACGTTAATCCGGTGCCTCAGAC---AAGTTCTACGGATGCT------ACAACGCCACAAG 2651 Query 1052 GTAATCTGGCCGCTATTGGTACTATGTCACATAGAGGCGTC--GGTTTTACTAAGTCGTT 1109 | || || || ||| |||||||| | | | || |||| || |||||||| || || Sbjct 2652 GCAACCTTGCGGCTTTTGGTACTGT-TGGGTTCGAT-CGTCATGGCTTTACTAAATCCTT 2709 Query 1110 TACCGAGCATTGTCTGCTAATTGGT-TTGTTGGAGGTTACTGCTGATTTGTCTTATCAGC 1168 || |||||| | | | || ||| ||| | | | || || ||| || | ||||||| Sbjct 2710 CACAGAGCATGGACATATTATCGGTATTGCTTGCG-TTCGGGCCGATCTGACCTATCAGC 2768 Query 1169 AGGGTCTTGAACGTATGTGGTCTCGTCAAACGCGGTTTGATTTTTTCTGGCCCGCGTTGG 1228 | ||||| | ||||||||||| ||||| |||| || |||| ||||| || |||| Sbjct 2769 AAGGTCTCAACCGTATGTGGTCACGTCAGGATCGGTACGACTTTTATTGGCCTGCATTGG 2828 Query 1229 CGCAGATTGGTGAGCAGGCGGTGCTCAATCAAGAGATTTGTATGGTTGGCGGTGCTA-CG 1287 | || | ||||| || ||||| |||||| | ||||||| | | || | | || Sbjct 2829 CTCATTTGGGTGAACAAGCGGTACTCAATAAGGAGATTTAT---GCACAAGGCACAAGCG 2885 Query 1288 GATACCCAGA--TTTGGGGGTATCAGGAGCGTTATGCTGAGTATCGGTATAAGCCGTCTC 1345 | || || | | || |||||||| || || || || || || ||||| ||||| | Sbjct 2886 CAGACGATGACGTATTTGGATATCAGGAACGGTACGCAGAATACCGTTATAAACCGTCAC 2945 Query 1346 GTATTTGCGGTCAGTTTCGG---AGTTCGTATACGGCGCCGTTGGATAGTTGGCATTTGT 1402 ||| ||| ||| ||| | | | | ||| | | | || | |||||| ||| Sbjct 2946 AGATTACCGGAGCGTTCCGGTCAAATGCATCTACCTCTC---TCGACACGTGGCATCTGT 3002 Query 1403 CGCAATACTTTACGACTC--TTCCGGCGCTTAATTCGACTTTTATTCAGGATGCTCCGCC 1460 |||| |||| || || | || | ||||| || ||||| |||| ||||| Sbjct 3003 CGCAGGACTT--CGGTTCCTTACCTGTCCTTAACAAAACGTTTATCGAGGAAAACCCGCC 3060 Query 1461 TATTTCGCGGATTGTTGCGGTGCCTTCGCAACCGCAGTTTTTGTTGGATTGTTATTTCAA 1520 || ||| | ||||||| || |||| || || | | |||| ||| ||| | Sbjct 3061 GATAGATCGGGTGATTGCGGTTCCAAGCGAACCCCATTTCATTCTTGATTCTTACTTCCA 3120 Query 1521 TTTGAAGTGCTCTCGGCCCATGCCGGTGTATGGTGTGCCTGGTAACATTGATCGTTTCTA 1580 | || || ||||||| ||||| ||||||| || || ||| ||||| | |||||| Sbjct 3121 ACTTAAATGTGCTCGGCCGATGCCTATGTATGGCGTACCAGGTCTTATTGACCATTTCTA 3180 Query 1581 AGGGAAGGGG 1590 | |||||| Sbjct 3181 AAAAAAGGGG 3190 Score = 80.6 bits (88), Expect = 8e-12 Identities = 140/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1 ATGTCTCACATGTTTTCGCAAGTCCCTAAGGCTTCTATTCCGCGTTCTACGTTTGACAGG 60 ||||||||| |||||| |||| ||||| || ||||||||||| | || || | Sbjct 1631 ATGTCTCACGGCTTTTCGAAAGTTCCTAAAGCCGAAATTCCGCGTTCGTCTTTCAACCGT 1690 Query 61 TCTCACGGTATGAAGGCTACTTTCGATAGTGGTTATTTGATTCCTATTTATGTCGATGAG 120 ||||||||| |||| | || || || || | | ||||| |||| |||||| Sbjct 1691 TCTCACGGTTTGAAAACCACATTTGACGCCGGAAAGCTCATTCCAATTTTCTGCGATGAA 1750 Query 121 GCTTTGCCGGGTGATACGTTCAATCTGAGTTTAACTACGTTTGCTCGTTTGTCTACGCCG 180 | | || ||||||||||||||| ||| | | || || | || | ||||||| Sbjct 1751 GTACTTCCTGGTGATACGTTCAATTTGAATATGACCGGCTTCGGCCGACTTGCTACGCCA 1810 Query 181 TTGCATCCTGTAATGGATAATATG 204 | ||||| || |||||||| ||| Sbjct 1811 CTTCATCCGGTCATGGATAACATG 1834 >seq8165 Length=2345 Score = 118 bits (130), Expect = 3e-23 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 424 GCGTATAATTTGATTTGGAATCAGTGGTTTCGTGATCAGAATTTGCAGAATTCTGTTGTT 483 || |||||| | ||||||||| | ||||| |||||||| ||| | ||| |||||||||| Sbjct 1694 GCTTATAATCTTATTTGGAATGAATGGTTCCGTGATCAAAATATACAGGATTCTGTTGTA 1635 Query 484 GTCGATATGGGTGACGGTCCTGATAATCCGGCTAATTATGTTTTGTTGAGGCGCGGTAAG 543 || |||| | ||| || ||||||| | | ||||| ||| || || || ||||| Sbjct 1634 GTAGATACTGATGATGGACCTGATACTGATAGTGATTATACTTTATTAAGACGTGGTAAA 1575 Query 544 CGCCATGATTATTTTACGGCGTCGTTGCCTTGGCCTCAGAAGGGTCCGTCTGTTTCTATT 603 || |||||||||||||| | | | ||||||||||| || ||||| |||| | Sbjct 1574 CGTCATGATTATTTTACTTCTGCTCTTCCTTGGCCTCAAAAAGGTCCTGGTGTTGAATTG 1515 Query 604 CCTCTTGG 611 |||||||| Sbjct 1514 CCTCTTGG 1507 >seq62978 Length=1440 Score = 114 bits (126), Expect = 4e-22 Identities = 139/188 (74%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 18 GCAA-GTCCCTAAGGCTTCTATTCCGCGTTCTACGTTTGACAGGTCTCACGGTATGAAGG 76 |||| || || |||||| ||||| |||||| ||||||| | ||||| ||| |||| Sbjct 720 GCAATGTGCCGAAGGCTGAGATTCCCCGTTCTTCGTTTGATCGTTCTCATGGTCTGAAAA 661 Query 77 CTACTTTCGATAGTGGTTATTTGATTCCTATTTATGTCGATGAGGCTTTGCCGGGTGATA 136 | || || ||| ||| | | |||||||||| ||| ||||||| | | || ||||||| Sbjct 660 CGACCTTTGATGCCGGTAAGCTTATTCCTATTTTTGTGGATGAGGTTCTTCCAGGTGATA 601 Query 137 CGTTCAATCTGAGTTTAACTACGTTTGCTCGTTTGTCTACGCCGTTGCATCCTGTAATGG 196 |||| ||| ||| | | || |||| || || ||||||| | |||||||| |||| Sbjct 600 CGTTTAATTTGAATATGACCGGCTTTGGCCGGCTGGCTACGCCTCTTCATCCTGTGATGG 541 Query 197 ATAATATG 204 |||||||| Sbjct 540 ATAATATG 533 >seq172181 Length=4472 Score = 107 bits (118), Expect = 6e-20 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 420 TCGGGCGTATAATTTGATTTGGAATCAGTGGTTTCGTGATCAGAATTTGCAGAATTCTGT 479 ||| || || ||| | |||| ||| | |||||||| || || || || ||| ||||||| Sbjct 2746 TCGCGCTTACAATCTTATTTATAATGAATGGTTTCGAGACCAAAACTTACAGGATTCTGT 2805 Query 480 TGTTGTCGATATGGGTGACGGTCCTGATAATCCGGCTAATTATGTTTTGTTGAGGCGCGG 539 || ||||||| | ||||||||| ||| |||| || |||||||| | | | || || Sbjct 2806 CGTCGTCGATAAAGATGACGGTCCGGATGATCCTGCGGATTATGTTATTCTTACCCGTGG 2865 Query 540 TAAGCGCCATGATTATTTTACGGCGTCGTTGCCTTGGCCTCAGAAGGGT 588 || | ||||||||||| || | | || ||||||||||| |||||| Sbjct 2866 AAAAAGGCATGATTATTTCACATCTGCCTTACCTTGGCCTCAAAAGGGT 2914 Score = 89.7 bits (98), Expect = 2e-14 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 803 ATTTGGCGACTGCTACTGCGGCTACTATTAACCAGCTTCGTCAGGCTTTTCAGATACAGA 862 |||| || |||||||||| || || ||||| | ||||| | || |||||| | || | Sbjct 3144 ATTTAGCCTCTGCTACTGCTGCAACAATTAATGAACTTCGCGAAGCGTTTCAGCTTCAAA 3203 Query 863 AGATTTAT-GAGAGGGATGCCCGTGGAGGTACGCGTTATACGGAGCTTATTCAGGCTCAC 921 | ||| | ||| |||| || ||||| ||||| |||||||| || | | | |||| Sbjct 3204 A-ATTACTAGAGCGGGACGCTCGTGGCGGTACTCGTTATACTGAAATCGTGAAATCTCAT 3262 Query 922 TTTGGCGTCACTTCTCCTGACGCTCGTTTGCAGCGTGCTGAGTATCTCGGTGG 974 || | || ||||||||||||||| | | |||||| |||| | || ||||| Sbjct 3263 TTCGCGGTTACTTCTCCTGACGCTAGACTTCAGCGTCCTGAATTCCTTGGTGG 3315 >seq160671 Length=4645 Score = 86.0 bits (94), Expect = 2e-13 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 424 GCGTATAATTTGATTTGGAATCAGTGGTTTCGTGATCAGAATTTGCAGAATTCTGTTGTT 483 || |||||| | || ||||| | ||||| | || || ||||| || ||||||||||| Sbjct 3504 GCTTATAATCTTATATGGAACGAATGGTTCAGAGACCAAAATTTACAAGATTCTGTTGTT 3445 Query 484 GTCGATATGGGTGACGGTCCTGATAATCCGGCTAATTATGTTTTGTTGAGGCGCGGTAAG 543 || || | || || ||||| |||| || | ||||||| || || | | ||||| Sbjct 3444 GTAGACAAGGACGATGGTCCAGATAGCCCAACAGATTATGTATTATTAAATAGAGGTAAA 3385 Query 544 CGCCATGATTATTTTAC 560 ||||||||||||||||| Sbjct 3384 CGCCATGATTATTTTAC 3368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14657109813385