Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_027645.1 Length=4631 Score E Sequences producing significant alignments: (Bits) Value seq117558 199 1e-47 seq172227 152 2e-33 seq171756 149 2e-32 seq59597 136 1e-28 seq172143 91.5 4e-15 seq172207 89.7 2e-14 seq25929 84.2 6e-13 seq8165 84.2 6e-13 seq172111 80.6 8e-12 >seq117558 Length=7756 Score = 199 bits (220), Expect = 1e-47 Identities = 528/790 (67%), Gaps = 40/790 (5%) Strand=Plus/Minus Query 874 ACGGCTGCGACTATTAACCAGCTGCGGCAGAGCTTTC-AGATCCAGAAGTTGCTTGAGCG 932 || ||||| || ||||| | ||||| | ||| ||| || | ||||| |||| || || Sbjct 5073 ACTGCTGCAACGATTAATGATCTGCGCGA-AGCGTTCCAGGTTCAGAAAATGCTCGAACG 5015 Query 933 CGATGCGCGTGGCGGCACCCGCTATACCGAGATTGTTCGTTCACACTTCGGTGTTATTTC 992 ||||| ||| || ||| | || || |||||| ||| | || |||||||| | || Sbjct 5014 TGATGCTCGTTCTGGTACCAGGTACACGGAGATTATTCAGGCCCATTTCGGTGTAACCTC 4955 Query 993 GCCGGATGCTAGGCTGCAGCGTCCGGAGTACCTTGGTGGTGGTCATTCGATGATTTCGAT 1052 || |||||| | || ||||| || || ||||| || |||||| ||| | |||| || Sbjct 4954 TCCTGATGCTCGTCTCCAGCGCCCTGAATACCTCGGCGGTGGTTCTTCCAGGATTAATAT 4895 Query 1053 GAATCCTATTGCTCAGACGCAAGGCACGGGTGCGAGTGGTACCTCCACGCCGCAGGGTAA 1112 || || |||| ||| || ||| || | | | || || || ||||| Sbjct 4894 TTCGCCGGTTCCTCAAACGA---------GTTCGACTGATGCGACTACTCCTCAAGGTAA 4844 Query 1113 CTTGGCTGCTTTCGGGCAT--TACCTTGCGCCGAATCATGGTTTTACGCAGAGCTTTACC 1170 | |||| ||| || | | ||| || |||||||| || || ||||| Sbjct 4843 TCTCGCTGGTTTTGGTACTGTTGGCTTTGATCGC--CATGGTTTCACCAAGTCTTTTACT 4786 Query 1171 GAGCATGGTCACATCATCGG-TTTGGTGGCGGTTCGTGCGGATCTGACGTATCAGCAGGG 1229 ||||||||||| || || || | | | || || || || || ||||| ||||| ||||| Sbjct 4785 GAGCATGGTCATATTATTGGCCTCGCTTGC-GTCCGGGCCGACCTGACCTATCAACAGGG 4727 Query 1230 CATGCGCAAGATGTGGTCTCGGTTGACTAGGTATGACTTTTATTTCCCGGTTTTTGCGAT 1289 | | | |||||||| ||| | |||| |||||||||| |||| || || Sbjct 4726 CCTTAACCGTATGTGGTCCCGGCAGGACCGGTACGACTTTTATTGGCCGGCGTTGGCCCA 4667 Query 1290 GCTTGGCGAGCAGGCTGTTTTGAACAAGGAGATTTATTGC----GATGGTTCGGCCAACG 1345 ||||| |||||||| || ||||| |||||||||| |||| | |||| ||| ||| Sbjct 4666 CCTTGGTGAGCAGGCGGTATTGAATAAGGAGATTT-TTGCTCAAGGGAGTTCCGCCGACG 4608 Query 1346 ATACTGCTGTATTTGGTTATCAGGAAAGGTGGGCTGAGTACCGCTACAACCCCTCTCAAA 1405 | || || |||||||||||||| | | || || ||||| ||||| |||||||| | Sbjct 4607 A---TGAGGTGTTTGGTTATCAGGAGCGTTATGCCGAATACCGGTACAAACCCTCTCAGA 4551 Query 1406 TTACCGGCCTTTTCCGCTCTACTTATGCGACGCCGCTGGATGCTTGGCATTACGCGCAGA 1465 ||||||| |||||||||| | |||||| || ||||| | |||||| | ||| Sbjct 4550 TTACCGGGGCATTCCGCTCTAATGCGGCGACGTCGTTGGATACCTGGCATCTGTCCCAGG 4491 Query 1466 AGTTTACGTCGCTTCCGACACTCGCTTCGACGTTTATCCAGGACACTCCCCC--TTTGTC 1523 ||||| ||| | || || | |||||| || |||| | || || || || Sbjct 4490 AGTTTGGTTCGTTGCCCGTTCTTGGCAAGACGTTCATTGAGGAAAACCCGCCGGTTGATC 4431 Query 1524 CCGCAACCTTGCGGTTGGCGCTGGGGCCAATGGCCAGCAATTGCTCCTGGACGCTTTCTT 1583 | | ||||||| || || || | ||| || || || | |||| || ||| Sbjct 4430 GAGTGA--TTGCGGT--GCCCT----CCGA--GCC-CCACATGATCTTTGACGGTTACTT 4382 Query 1584 TAACATGCAAGT-CGCCCGTCCGCTCCCGATGTATTCGGTCCCCGGTTTGATTGATCATT 1642 | || |||| ||||| || | |||||||| || || |||||| | ||||| |||| Sbjct 4381 CGATTTG-AAGTGTGCCCGGCCTATGCCGATGTACTCCGTTCCCGGTCTTATTGACCATT 4323 Query 1643 TCTGATATGC 1652 |||||| ||| Sbjct 4322 TCTGATCTGC 4313 Score = 95.1 bits (104), Expect = 4e-16 Identities = 161/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 98 TGAAGACTACGTTTGATTCGGGTTACTTGGTCCCCATCAT-GTGCGAGGAGGTGCTTCCC 156 |||| || |||||||| | ||| | ||| | || || | ||| || |||||||||||| Sbjct 958 TGAAAACAACGTTTGACGCCGGTAAATTGATTCCGATTTTTGTG-GATGAGGTGCTTCCC 900 Query 157 GGGGATACGTTCAACGTTAAGACCACGCTGTTTGGTCGTCTGGCTACGCCGATTTTTCCT 216 || |||||||| || | || | || || ||||| |||| ||||| || ||| Sbjct 899 GGTGATACGTTTAATTTGAATATGACCGGCTTCGGTCGCTTGGCGACGCCACTTCATCCG 840 Query 217 GTGATGGACAACCTTCACCTCGAGACGttttttttCTTCGTGCCGAATCGTTTGGTTT-G 275 | ||||| || | ||||||| |||||||| || |||||||| || || |||||| | Sbjct 839 ATCATGGATAATATGTACCTCGAAACGTTTTTCTTTTTCGTGCCAAACCGACTGGTTTGG 780 Query 276 GTCTGATTGGCAGCGTTTCATGGGTGAGCAGGCGAACCCGGCTGATTC 323 | | | || | |||| || ||||| ||| | || || | |||||| Sbjct 779 GACAACTGGGAAAAGTTTAAT-GGTGAACAGACTAATCCTGGTGATTC 733 >seq172227 Length=4743 Score = 152 bits (168), Expect = 2e-33 Identities = 411/616 (67%), Gaps = 31/616 (5%) Strand=Plus/Minus Query 866 CTACTGCGACGGCTGCGACTATTAACCAGCTGCGGCAGAGC-TTTCAGATCCAGAAGTTG 924 || |||| || ||| | ||||| || | || || | ||| |||||||| || | || Sbjct 899 CTTCTGCTACTGCTTCAACTATCAATGAACTTCGTGA-AGCGTTTCAGATTCA-AGGTCT 842 Query 925 CTT-GAGCGCGATGCGCGTGGCGGCACCCGCTATACCGAGATTGTTCGTTCACACTTCGG 983 ||| || || || || | ||||| || || || || |||||| || || || || || Sbjct 841 CTTAGAACGTGACGCTAGAGGCGGTACACGTTACACAGAGATTATTAAGTCCCATTTTGG 782 Query 984 TGTTATTTCGCCGGATGCTAGGCTGCAGCGTCCGGAGTACCTTGGTGGTGGTCATTCGAT 1043 ||||| | |||||| | | |||| ||||| ||||| ||||| || ||| | | Sbjct 781 TGTTACTAGTCCGGATTATCGCATGCAACGTCCTGAGTATCTTGGAGGCGGTTCTACACC 722 Query 1044 GATTTCGATG--AATCCTATTGCTCAGACGCAAGGCACGGGTGCGAGTGGTACCTCCACG 1101 | || ||| ||| ||||||| |||| || | | | || | | | | Sbjct 721 G--TTGCATGTTAATGCTATTGC------GCAA---ACTTCTTCTACTGATGCTACTAGC 673 Query 1102 CCGCAGGGTAACTTGGCTGCTTTCGGGCATTACCTTGC------GCCGAATCATGGTTTT 1155 || || ||||| ||||| ||| | ||| |||| | | | || ||||||||| Sbjct 672 CCACAAGGTAATTTGGCGGCTAT--GGC--TACCGTTCAAGTTCGTGGA--CATGGTTTT 619 Query 1156 ACGCAGAGCTTTACCGAGCATGGTCACATCATCGGT-TTGGTGGCGGTTCGTGCGGATCT 1214 | || ||||| |||||| || || || ||| ||| | | | ||||||| ||| | Sbjct 618 GCTAAGTCGTTTACTGAGCATTGTGTTATTATTGGTCTTGCTAGTG-TTCGTGCTGATTT 560 Query 1215 GACGTATCAGCAGGGCATGCGCAAGATGTGGTCTCGGTTGACTAGGTATGACTTTTATTT 1274 || |||||||| || | | ||||||||||| |||| | ||||| || |||| Sbjct 559 GAATTATCAGCAAGGTCTTAACCGTATGTGGTCTCGCCAGACTCGCTATGATTTCTATTA 500 Query 1275 CCCGGTTTTTGCGATGCTTGGCGAGCAGGCTGTTTTGAACAAGGAGATTTATTGCGATGG 1334 || | |||| ||||| || || |||||||||| ||||| |||||| || || Sbjct 499 TCCTGCACTTGCACACCTTGGTGAACAAGCTGTTTTGAGTAAGGAAATTTATGCGGACGG 440 Query 1335 TTCGGCCAACGATACTGCTGTATTTGGTTATCAGGAAAGGTGGGCTGAGTACCGCTACAA 1394 || || | || | |||| ||||||||||||||| | | ||||| || ||||| || Sbjct 439 CTCTGCTGATGACGATACTGTTTTTGGTTATCAGGAACGTTATGCTGAATATCGCTATAA 380 Query 1395 CCCCTCTCAAATTACCGGCCTTTTCCGCTCTACTTATGCGACGCCGCTGGATGCTTGGCA 1454 |||||| ||||| || | ||||| ||||||| || | ||||||||||||| Sbjct 379 GCCCTCTTTGATTACTGGTCAGTTCCGTAGTACTTATTCGCAATCTTTGGATGCTTGGCA 320 Query 1455 TTACGCGCAGAAGTTT 1470 || || ||||| ||| Sbjct 319 TTTGGCTCAGAAATTT 304 Score = 102 bits (112), Expect = 2e-18 Identities = 212/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 100 AAGACTACGTTTGATTCGGGTTACTTGGTCCCCATCATGTGCGAGGAGGTGCTTCCCGGG 159 |||||||| ||| || | ||| | ||||| || || || || ||||| | || || Sbjct 1611 AAGACTACTTTTAATGCTGGTGATTTGGTTCCTATTTTGGTTGATGAGGTTTTACCTGGT 1552 Query 160 GATACGTTCAAC-GTTAAGACCACGCTGTTTGGTCGTCTGGCTACGCCGATTTTTCCTGT 218 |||||||||||| || ||| | ||| |||||||| ||||||| || ||||| || | Sbjct 1551 GATACGTTCAACTGTAAAGTTGATGCT-TTTGGTCGCTTGGCTACTCCTATTTTCCCAAT 1493 Query 219 GATGGACAACCTTC--ACCTCGAGACGttttttttCTTCGTGCCGAATCGTTTGGTTTGG 276 ||||| || ||| | || ||||| ||||| || || | ||||||| | ||| Sbjct 1492 TATGGATAA--TTCGTTTTTAGATACGTTCTTTTTTGCTGTTCCCATTCGTTTGTTATGG 1435 Query 277 TCTGATTGGCAGCGTTTCATGGGTGAGCAGGCGAACCCGGCTGATTCGATTTCTTTTTCT 336 | | ||| ||||||| | |||| |||| || || | |||||||||| |||| || Sbjct 1434 GATAACTGGGAGCGTTTTAATGGTGCTCAGGATAAACCCGGTGATTCGATTGATTTTACT 1375 Query 337 ATTCCGCAGGTCGTTAGTCCTGCGAGTGGTTATGTTGCGAACTCGCTCTATGACTATTTC 396 ||| || | | ||||| ||||| | | || ||| || ||||||| ||| Sbjct 1374 TGTCCTGTTGTGGACACTCCTGTCGGTGGTCACGCTGTTGGCTCACTTTATGACTTTTTT 1315 Query 397 GGTTTACCCAC 407 ||| | || || Sbjct 1314 GGTATCCCTAC 1304 >seq171756 Length=3219 Score = 149 bits (164), Expect = 2e-32 Identities = 320/476 (67%), Gaps = 22/476 (5%) Strand=Plus/Minus Query 859 GACCTTTCTACTGCGACGGCTGCGACTATTAACCAGCTGCGGCAGAGCTTTCAGATCCAG 918 ||||| || | || ||||| | |||||| ||| | ||||| ||| |||||| | || Sbjct 470 GACCTGTCGGCCGCTACGGCGGTGACTATCAACGAACTGCGTCAGGCGTTTCAGGTACAA 411 Query 919 AAGTTGCTTGAGCGCGATGCGCGTGGCGGCACCCGCTATACCGAGATTGTTCGTTCACAC 978 ||| ||||||||||||||||||| || || || || ||||| || ||||||||||| || Sbjct 410 AAGCTGCTTGAGCGCGATGCGCGAGGTGGTACGCGGTATACGGAAATTGTTCGTTCTCAT 351 Query 979 TTCGGTGTTATTTCGCCGGATGCTAGGCTGCAGCGTCCGGAGTACCTTGGTGGTGGTCAT 1038 || ||||| | || ||||| || | ||||||||||||| || || || || ||| Sbjct 350 TTTGGTGTCACGTCCCCGGACGCACGTTTGCAGCGTCCGGAATATCTCGGGGGCGGTAGC 291 Query 1039 TCGATGATTTCGATGAATCCTATTGCTCAGAC----GCAAGGCACGGGTGCGAGTGGTAC 1094 || | | || | || ||| |||||| |||| ||| || ||| | Sbjct 290 TCCCCGGTCAACATCACGCCAATTCATCAGACTCAGGCAACGCA-GGCCACGATT----- 237 Query 1095 CTCCACGCCGCAGGGTAACTTGGCTGCTTTCGGGCATTACCTTGCGCC-GAAT---CATG 1150 ||||||| || ||||| | | |||| ||| | || |||| |||| Sbjct 236 ----ACGCCGCTCGGCGCGTTGGCCGGTATCGG----TACGGCGAACCTGAATGGCCATG 185 Query 1151 GTTTTACGCAGAGCTTTACCGAGCATGGTCACATCATCGGTTTGGTGGCGGTTCGTGCGG 1210 | || |||||| |||||||| || | | | || || | || |||||||| | Sbjct 184 GGTTCACGCAGTCGTTTACCGAACACTGCATCGTTATTGGGCTTGTCTGTGTTCGTGCAG 125 Query 1211 ATCTGACGTATCAGCAGGGCATGCGCAAGATGTGGTCTCGGTTGACTAGGTATGACTTTT 1270 | |||||||||||||||||| | | |||||||||||| ||| | || |||| | Sbjct 124 ACCTGACGTATCAGCAGGGCCTCAACCGCATGTGGTCTCGGCAGACCCGCTACGACTACT 65 Query 1271 ATTTCCCGGTTTTTGCGATGCTTGGCGAGCAGGCTGTTTTGAACAAGGAGATTTAT 1326 | | |||| | || ||||||| ||||| || |||| ||||| |||||| Sbjct 64 ACTGGCCGGCGCTCGCTCACATTGGCGAACAGGCCGTGCTGAATAAGGAAATTTAT 9 Score = 87.8 bits (96), Expect = 5e-14 Identities = 194/285 (68%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 33 TCACGATTTTGCGATGGTCCCGCGCGCGGAGATTCCGCGCTCGTCGTTTG--CGATGCAG 90 ||||||||| | | ||| ||| ||||| ||||| ||| || || | || || | Sbjct 1229 TCACGATTTGCCCA-GGTACCGAAGGCGGAAATTCCTCGCAGCTCTTTCGACCGTAGCTG 1171 Query 91 AAGACTTTGAAGACTACGTTTGATTCGGGTTACTTGGTCCCCATCAT-GTGCGAGGAGGT 149 | || | || || || |||||| | | |||| | |||| ||| | ||| || |||| Sbjct 1170 CACACAT--AAAACGACTTTTGATGCCGATTACCTTATCCCGATCTTCGTG-GATGAGGC 1114 Query 150 GCTTCCCGGGGATACGTTCAACGTTAAGACCACGCTGTTTGGTCGTCTGGCTACGCCGAT 209 ||| ||||| ||||||||||| | || | || ||||| ||| ||||||||||||| Sbjct 1113 GCTCCCCGGCGATACGTTCAATCTCAACATGACTGGGTTTGCTCGGATGGCTACGCCGAT 1054 Query 210 TTTTCCTGTGATGGACAACCTTCACCTCGAGACGttttttttCTTCGTGCCGAATCGTTT 269 | || | ||||| || || || | || ||||| || || ||| ||| | || | Sbjct 1053 TCACCCGCTCATGGATAATCTCTACATGGAAACGTTCTTCTTTGCCGTCCCGCACCGGCT 994 Query 270 GGTTTGGTCTGATTGGCAGCGTTTCATGGGTGAGCAGGCGAACCC 314 ||| ||| | | ||||| ||| || ||||||| |||||| Sbjct 993 GGTGTGGGATAACTGGCAAAAGTTCTGCGGCGAGCAGGAGAACCC 949 >seq59597 Length=4602 Score = 136 bits (150), Expect = 1e-28 Identities = 380/569 (67%), Gaps = 33/569 (6%) Strand=Plus/Plus Query 856 GCGGACCTTTCTACTGCGACGGCTGCGACTATTAACCAGCTGCGGCAGAGCTTTC-AGAT 914 || || || || |||| || || || || || ||| ||||||| | ||| ||| || | Sbjct 2408 GCTGATCTGTCATCTGCAACTGCGGCAACAATCAACGAGCTGCGTGA-AGCGTTCCAGGT 2466 Query 915 CCAGAAGTTGCTTGAGCGCGATGCGCGTGGCGGCACCCGCTATACCGAGATTGTTCGTTC 974 || || |||||||||| || || ||| || || || || || ||||| | | | Sbjct 2467 ACAAAAAATGCTTGAGCGTGACGCTCGTTCAGGTACTCGGTACACTGAGATCATCCAAGC 2526 Query 975 ACACTTCGGTGTTATTTCGCCGGATGCTAGGCTGCAGCGTCCGGAGTACCTTGGTGGTGG 1034 || || ||||| | ||||||||||| ||||| || || || || ||||||||||| || Sbjct 2527 TCATTTTGGTGTGACCTCGCCGGATGCCAGGCTTCAACGCCCTGAATACCTTGGTGGAGG 2586 Query 1035 -TCATTCGATGATTTCGATGAATCCTATTGCTCAGACGCAAG--GCACGGGTGCGAGTGG 1091 ||| | || || | ||||| | |||||| |||| |||| ||| | Sbjct 2587 ATCAACCCGTGTCAACG-TTAATCCGGTGCCTCAGA--CAAGTTCTACGGATGCTA---- 2639 Query 1092 TACCTCCACGCCGCAGGGTAACTTGGCTGCTTTCGGGCATTAC-CTTGCG-CCGA--ATC 1147 | ||||| || || ||| | || ||||| || ||| ||| | ||| || Sbjct 2640 -----CAACGCCACAAGGCAACCTTGCGGCTTTTGG----TACTGTTGGGTTCGATCGTC 2690 Query 1148 ATGGTTTTACGCAGAGCTTTACCGAGCATGGTCACATCATCGGT-TTGGTGGCGGTTCGT 1206 |||| ||||| | ||| || |||||||| || || |||||| ||| | || ||||| Sbjct 2691 ATGGCTTTACTAAATCCTTCACAGAGCATGGACATATTATCGGTATTGCTTGC-GTTCGG 2749 Query 1207 GCGGATCTGACGTATCAGCAGGGCATGCGCAAGATGTGGTCTCGGTTGACTAGGTATGAC 1266 || |||||||| |||||||| || | | |||||||| || | | |||| ||| Sbjct 2750 GCCGATCTGACCTATCAGCAAGGTCTCAACCGTATGTGGTCACGTCAGGATCGGTACGAC 2809 Query 1267 TTTTATTTCCCGGTTTTTGCGATGCTTGGCGAGCAGGCTGTTTTGAACAAGGAGATTTAT 1326 ||||||| || | || || | || || || || || | || |||||||||||| Sbjct 2810 TTTTATTGGCCTGCATTGGCTCATTTGGGTGAACAAGCGGTACTCAATAAGGAGATTTAT 2869 Query 1327 TGCGATGGTTC---GGCCAACGATACTGCTGTATTTGGTTATCAGGAAAGGTGGGCTGAG 1383 | || | || |||| || |||||||| ||||||||| ||| || || Sbjct 2870 GCACAAGGCACAAGCGCAGACGA---TGACGTATTTGGATATCAGGAACGGTACGCAGAA 2926 Query 1384 TACCGCTACAACCCCTCTCAAATTACCGG 1412 ||||| || || || || || |||||||| Sbjct 2927 TACCGTTATAAACCGTCACAGATTACCGG 2955 Score = 82.4 bits (90), Expect = 2e-12 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 96 TTTGAAGACTACGTTTGATTCGGGTTACTTGGTCCCCATCATGTGCGAGGAGGTGCTTCC 155 |||||| || || ||||| | || | | | || || | ||||| || || ||||| Sbjct 1699 TTTGAAAACCACATTTGACGCCGGAAAGCTCATTCCAATTTTCTGCGATGAAGTACTTCC 1758 Query 156 CGGGGATACGTTCAACGTTAAGACCACGCTGTTTGGTCGTCTGGCTACGCCGATTTTTCC 215 || ||||||||||| | || | || || || || || |||||||| || ||| Sbjct 1759 TGGTGATACGTTCAATTTGAATATGACCGGCTTCGGCCGACTTGCTACGCCACTTCATCC 1818 Query 216 TGTGATGGACAACCTTCACCTCGAGACGttttttttCTTCGTGCCGAATCGTTTGGTTTG 275 || ||||| ||| | || | || |||||||| || ||||| || || || ||||||| Sbjct 1819 GGTCATGGATAACATGTACTTGGAAACGTTTTTCTTTTTCGTTCCAAACCGACTGGTTTG 1878 Query 276 GTCTGATTGGCAGCGTTTCATGGGTGAGCAGGCGAACCCGGCTGATTCGA 325 | ||||| | || | |||||||| || | || | |||||||| Sbjct 1879 GGACAATTGGGAAAAGTTTAACGGTGAGCAAGCCGATCCTGGTGATTCGA 1928 >seq172143 Length=4297 Score = 91.5 bits (100), Expect = 4e-15 Identities = 214/321 (67%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 1150 GGTTTTACGCAGAGCTTTACCGAGCATGGTCACATCATCGGTTTGGTGGCGGTTCGTGCG 1209 || ||||| | |||||| || ||||| | | || ||| |||| | ||| || Sbjct 1169 GGCTTTACCAAAAGCTTTGTAGAACATGGCTATGTAATAGGTATGGTACAAGCTCGCGCC 1110 Query 1210 GATCTGACGTATCAGCAGGGCATGCGCAAGATGTGGTCTCGGTTGACTAGGTATGACTTT 1269 ||| | || ||||| || || | ||| | ||| |||| | ||||||| ||| || Sbjct 1109 GATATTACTTATCAACAAGGACTCAACAAACTATGGACTCGTTCCACTAGGTTTGATTTC 1050 Query 1270 TATTTCCCGGTTTTTGCGATGCTTGGCGAGCAGGCTGTTTTGAACAAGGAGATTTATTGC 1329 | | || || | ||| || ||||| || ||||||||||| || || || Sbjct 1049 TTCTGGCCAAAACTTCAGCAGCTCGGAGAGCAAGCGGTTTTGAACAAAGAAATATACGCA 990 Query 1330 GATGGTTCG---GCCAACGATACTGCTGTATTTGGTTATCAGGAAAGGTGGGCTGAGTAC 1386 | || | ||| ||||| | ||||||||||| || ||||||| ||||| ||| Sbjct 989 CAAGGCACTAGTGCCGACGAT---GACGTATTTGGTTACCAAGAAAGGTATGCTGAATAC 933 Query 1387 CGCTACAACCCCTCTCAAATTACCGGCCTTTTCCGCTCTACTTATGCGACGCCGCTGGAT 1446 |||||||| |||||| |||| | |||| ||||| ||||| | ||| | | || ||| Sbjct 932 CGCTACAAGCCCTCTGAAATCAGAGGCCAATTCCGTTCTACATTCGCGCAGTCACTAGAT 873 Query 1447 GCTTGGCATTACGCGCAGAAG 1467 | |||||| | ||||||| Sbjct 872 GTATGGCAT--CTAGCAGAAG 854 >seq172207 Length=4585 Score = 89.7 bits (98), Expect = 2e-14 Identities = 357/560 (64%), Gaps = 33/560 (6%) Strand=Plus/Minus Query 865 TCTACTGCGACGGCTGCGACTATTAACCAGCTGCGGCAGAGCTTTCAGATCCAGAAGTTG 924 || ||||| |||||||| | ||||| | | | || || |||||||| ||||| ||| Sbjct 4043 TCCACTGCTACGGCTGCAAGTATTAGCGATATTCGTGAGGCATTTCAGATTCAGAAATTG 3984 Query 925 CTTGAGCGCGATGCGCGTGGCGGCACCCGCTATACCGAGATTGTTCGTTCACACTTCGGT 984 |||||||| |||||||| || || || || ||||| || || | | |||| ||||| Sbjct 3983 CTTGAGCGTGATGCGCGAGGTGGTACACGGTATACTGAAATCATCCAGGCACATTTCGGA 3924 Query 985 GTTATTTCGCCGGATGCTAGGCTGCAGCGTCCGGAGTACCTTGGTGGTGGTCATTCGATG 1044 || | ||| || || | ||||| | ||||| ||||| || || || |||| | Sbjct 3923 GTAACTTCAGATGACGCACGACTGCAAAGACCGGAATACCTCGGAGGCGG---CTCGACG 3867 Query 1045 ATTTCGATGAAT------CCTATTGCTCAGACGCAAGGCACGGGTGCGAGTGGTACCTCC 1098 |||| ||| |||||| ||||| || | | | || | | Sbjct 3866 ---CCGATCAATGTTTCGCCTATTCCTCAG---------ACTTCTTCAACTGACGCAACA 3819 Query 1099 ACGCCGCAGGGTAACTTGGCTGCTTTCGGGCAT--TACCTTGCGCCGAATCATGGTTTTA 1156 || || || ||||| ||||||||| | || | | | || || | ||||||||||| Sbjct 3818 ACTCCTCAAGGTAATTTGGCTGCTATTGGTACTGCTTCTTTTAGCGG--TCATGGTTTTA 3761 Query 1157 CGCAGAGCTTTACCGAGCATGGTCACATCATCGGTTTGGTGGCGGTTCGTGCGGATCTGA 1216 || || |||||||| | ||||||||| | || ||| | || ||| | | Sbjct 3760 GTAAGTCTTTCACCGAGCACAATATTATCATCGGTCTTGTTAGTGTTAGAGCAGATTTAA 3701 Query 1217 CGTATCAGCAGGGCATGCGCAAGATGTGGTCTCGGTTGACTAGG----TATGACTTTTAT 1272 | ||||||||||| | | ||||||||| ||| | ||| ||||| ||||| Sbjct 3700 CCTATCAGCAGGGACTAAACCGGATGTGGTCCCGG----CAAGGCCGTTATGATTTTTAC 3645 Query 1273 TTCCCGGTTTTTGCGATGCTTGGCGAGCAGGCTGTTTTGAACAAGGAGATTTATTGCGAT 1332 | || | | || |||| |||||||| || | || || || ||||| | Sbjct 3644 TGGCCCGCGCTCGCTCATATTGGTGAGCAGGCGGTGCTTAATAAAGAAATTTACGCACAA 3585 Query 1333 GGTTCGGCCAACGATACTGCTGTATTTGGTTATCAGGAAAGGTGGGCTGAGTACCGCTAC 1392 || | || | ||| | || ||||| || ||||| | | || || |||||||| Sbjct 3584 GGGACAGCAGATGATGACGAAGTGTTTGGATACCAGGAGCGTTACGCAGAATACCGCTAT 3525 Query 1393 AACCCCTCTCAAATTACCGG 1412 || || || || || | ||| Sbjct 3524 AAGCCGTCGCAGATCAGCGG 3505 >seq25929 Length=3554 Score = 84.2 bits (92), Expect = 6e-13 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 100 AAGACTACGTTTGATTCGGGTTACTTGGTCCCCATCATGTGCGAGGAGGTGCTTCCCGGG 159 ||||| ||||| ||| | | | || |||| || ||| ||| ||||||||||| || Sbjct 2223 AAGACGACGTTCGATGCAGCCCAGCTGATCCCGATAATGGTCGACGAGGTGCTTCCTGGT 2282 Query 160 GATACGTTCAACGTTAAGACCACGCTGTTTGGT-CGTCTGGCTACGCCGATTTTTCCTGT 218 |||||||| ||||||| || || |||| || ||||| || || || |||| ||| || Sbjct 2283 GATACGTTTAACGTTAGAACGGCG-GGTTTCGTCCGTCTCGCAACCCCTATTTATCCGGT 2341 Query 219 GATGGACAACCTTCACCTCGAGACGtt--ttttttCTTCGTGCCGAATCGTTTGGTTTGG 276 |||||||| | ||| |||||| | ||| |||||||| || || | ||| Sbjct 2342 CATGGACAATATGTTCCT--TGACGTTCACTATTTTTTCGTGCCTTGCCGGCTGCTATGG 2399 Query 277 TCTGATTGGCAGCGTTTCATGGGTGA 302 | ||||| || ||||||||||| Sbjct 2400 GAAAACTGGCAACGCTTCATGGGTGA 2425 >seq8165 Length=2345 Score = 84.2 bits (92), Expect = 6e-13 Identities = 172/256 (67%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1201 GTTCGTGCGGATCTGACGTATCAGCAGGGCATGCGCAAGATGTGGTCTCGGTTGACTAGG 1260 ||||| || ||| | || |||||||| || || | | ||||| ||| | | | Sbjct 966 GTTCGGGCTGATTTAACTTATCAGCAAGGGATTCCTAGGATGTTTTCTAGATCAGAGCGT 907 Query 1261 TATGACTTTTATTTCCCGGTTTTTGCGATGCTTGGCGAGCAGGCTGTTTTGAACAAGGAG 1320 | || || |||| || | | |||| ||||| |||||| || || | || || ||| Sbjct 906 TTCGATTTATATTGGCCTGCTCTTGCTCATCTTGGAGAGCAGTCTATTCTTAATAAAGAG 847 Query 1321 ATTTATTGCGATGGTTCGGCCAACGATACTGCTGTATTTGGTTATCAGGAAAGGTGGGCT 1380 |||||| | ||| | | ||| || || ||||| ||||||||| | |||||| Sbjct 846 ATTTATGCTCAAGGTACTTCAGCTGATGATGAAGTTTTTGGATATCAGGAACGCTGGGCT 787 Query 1381 GAGTACCGCTACAACCCCTCTCAAATTACCGGCCTTTTCCGCTCTACTTATGCGACGCCG 1440 ||||| | || | || || ||||||| || | || || |||||||||||||| | Sbjct 786 GAGTATAGGTATTATCCGTCAAAAATTACTGGACAATTGCGATCTACTTATGCGACATCT 727 Query 1441 CTGGATGCTTGGCATT 1456 | |||| ||||||| Sbjct 726 TTAGATGTATGGCATT 711 >seq172111 Length=4147 Score = 80.6 bits (88), Expect = 8e-12 Identities = 111/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 883 ACTATTAACCAGCTGCGGCAGAGCTTT-CAGATCCAGAAGTTGCTTGAGCGCGATGCGCG 941 |||||||| || || || | |||||| || || || || || ||| ||||| || Sbjct 3312 ACTATTAATCAACTTCGAGA-AGCTTTTCAAATTCAAAAAATGTATGAAAAGGATGCTCG 3370 Query 942 TGGCGGCACCCGCTATACCGAGATTGTTCGTTCACACTTCGGTGTTATTTCGCCGGATGC 1001 ||| || || || ||||| || || ||||| | ||||||||||||| ||| || ||||| Sbjct 3371 TGGTGGTACTCGTTATACTGAACTTATTCGTGCTCACTTCGGTGTTACTTCACCTGATGC 3430 Query 1002 TAGGCTGCAGCGTCCGGAGTACCTTGGTGGTGG 1034 | | | || ||||| || || || || ||||| Sbjct 3431 TCGTTTACAACGTCCAGAATATCTCGGCGGTGG 3463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14679467575140