Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_027788.1 Length=2305 Score E Sequences producing significant alignments: (Bits) Value seq170113 98.7 1e-17 >seq170113 Length=2041 Score = 98.7 bits (108), Expect = 1e-17 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 748 TCCATCTTTTTGTTCGACGTTCCACGAGGAGGAATGGAGTATTTGCAGTACACTATCTTT 807 || || ||||| || | ||||| || || ||||| || | |||||||||||| || Sbjct 1260 TCTATTTTTTTAATCAATGTTCCTAGACTTGGCATGGAACATCTTCAGTACACTATCCTT 1201 Query 808 GAACAGCTTAAGAACCGGACTGTATTCTCTCCCAAGTACAATTCCATCACGAAGATCTTG 867 |||||||| || |||| ||| || || || || |||||||| | ||| ||| | || Sbjct 1200 GAACAGCTCAAAGACCGTGTTGTGTTTTCGCCGAAATACAATTCGACCACTAAGTTTTTA 1141 Query 868 AGAAAACTACCACATGTTATTATTTTCTCTAATGAATCACCTGATCGAAACAAAATG 924 || || ||||||||| | | |||| ||||||| ||||||| ||||||||| Sbjct 1140 AGCAAGACGCCACATGTTGTGGTGTTCTGCAATGAATTCCCTGATCTTAACAAAATG 1084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7253888229186