Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_030457.1 Length=2651 Score E Sequences producing significant alignments: (Bits) Value seq171168 113 8e-22 >seq171168 Length=2613 Score = 113 bits (124), Expect = 8e-22 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 851 GGAAAGTCTCGGAGAGCGTGGGAAGAAGCCGGACCAGGTGCCTATTCTAAAGATCCACGC 910 || || || || |||| ||||| || ||||| | | || | |||| ||||| || Sbjct 541 GGCAAATCACGTCGAGCCTGGGACGAGGCCGGTCTCGACGCTTTCCCTAAGGATCCTCGG 482 Query 911 AGCAAATTTTGGTGTGGCTACCGCTCTGACGAACATGTTGTTATCGATGAATTTAGAGGT 970 |||||||||| ||| ||||| | ||| ||||||||||||||||| ||| ||||| Sbjct 481 TCCAAATTTTGGGATGGTTACCGAGGTCACGCGCATGTTGTTATCGATGAGTTTCGAGGT 422 Query 971 GGTATCGATATCTCCCACTTGTTGCGATGGTTGGATAGGTATCCAGTCCGCGTTGAGATC 1030 || |||||| || |||| | ||||||||||| ||| | ||||| || ||| ||| | Sbjct 421 GGAATCGATGTCGCCCATCTCTTGCGATGGTTCGATCGATATCCTGTGGTCGTCGAGGTT 362 Query 1031 AAAGG 1035 ||||| Sbjct 361 AAAGG 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8359060103822