Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= NC_030476.1 Length=5184 Score E Sequences producing significant alignments: (Bits) Value seq172207 86.0 2e-13 >seq172207 Length=4585 Score = 86.0 bits (94), Expect = 2e-13 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 2731 TGCTACTGCTACTACTATTAATCAGCTTCGTATGGCATTCCAGATTCAGAAGTTGTATGA 2790 |||||| ||| | | ||||| | ||||| |||||| ||||||||||| ||| ||| Sbjct 4038 TGCTACGGCTGCAAGTATTAGCGATATTCGTGAGGCATTTCAGATTCAGAAATTGCTTGA 3979 Query 2791 AAAAGATGCCAGAGGTGGAACGAGATATATTGAATCAATAAAGTCTCACTTTGGAGTTAC 2850 ||||| ||||||| || | |||| |||| || || | || || ||||| || Sbjct 3978 GCGTGATGCGCGAGGTGGTACACGGTATACTGAAATCATCCAGGCACATTTCGGAGTAAC 3919 Query 2851 TTCTCCTGATGCAAGGCTGCAGAGACCTGAGTACCTCGGTGG 2892 ||| ||| ||| | ||||| ||||| || |||||||| || Sbjct 3918 TTCAGATGACGCACGACTGCAAAGACCGGAATACCTCGGAGG 3877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16445730753785