Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Condylostylus_20patibulatus_20[genbank_20GCA_5F001014875.1_202015- 05-28] 211,317 sequences; 451,941,653 total letters Query= NC_005040.1 Length=5499 Score E Sequences producing significant alignments: (Bits) Value seq95876 174 5e-40 >seq95876 Length=2910 Score = 174 bits (192), Expect = 5e-40 Identities = 165/208 (79%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 2247 GGTAAGAACttttttttCGATGCCGTTGCATCGTATTTGCTTTCAT-ATGGTATGTTCGG 2305 ||||| || | ||||||||| || || || |||| || ||| || | || |||||||| Sbjct 1244 GGTAAAAATTATTTTTTCGACGCAGTAGCTTCGTTCTT-CTTGAATTACGGCATGTTCGG 1302 Query 2306 TACAGCCAATAAAAACAATAATTTTTCGTGGGCAGACGGAGCGGGTAAACGATTAGTTCT 2365 ||| || ||||||| || |||||||||||||||||||||||||| || ||||||| | Sbjct 1303 TACGGCTAATAAAACTAACAATTTTTCGTGGGCAGACGGAGCGGGGAAGAGATTAGTGTT 1362 Query 2366 ATGGAACGAACCAAACTATGAACAATACCATATAGAAAAAATAAAAGAACTTTTGGGGGG 2425 ||||||||||| || |||||| ||||| || ||||||||||||||| | || || || Sbjct 1363 GTGGAACGAACCCAATTATGAAACTTACCACATTGAAAAAATAAAAGAATTATTAGGCGG 1422 Query 2426 AGATACAACAAGAATACATGTAAAATAT 2453 ||| || || | || |||||||||||| Sbjct 1423 AGACACGACGCGCATTCATGTAAAATAT 1450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17444387736920