Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_001270.2
Length=6825
Score E
Sequences producing significant alignments: (Bits) Value
seq1267 199 2e-47
seq1167 199 2e-47
seq1075 150 8e-33
seq1257 145 3e-31
seq973 140 1e-29
seq1217 129 3e-26
seq1112 123 1e-24
seq1244 120 1e-23
seq768 114 6e-22
>seq1267
Length=743
Score = 199 bits (220), Expect = 2e-47
Identities = 292/408 (72%), Gaps = 5/408 (1%)
Strand=Plus/Plus
Query 2567 TGGTAATTATGTTAAAAATATTGTTTTACCACT-AGAATTAGTtaataataatcctcgta 2625
|||| |||||| |||||||| ||||||| | || || || | |||||| ||||
Sbjct 170 TGGTGCTTATGTAAAAAATATAATTTTACCTATGAGTGCTATTTTA-AATAATAAGCGTA 228
Query 2626 ataaaatgggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTC 2685
|| || | || |||||||| || | ||||||||||| || | ||| | |||||
Sbjct 229 ATGAAGTTGGTATTAAAAATTTAGGTATTAATGATAAAAAGTTACGTAATTCTACTATTC 288
Query 2686 GCTCGCAAGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAA 2745
| | || ||| | || | ||||| ||| | ||||||| |||| ||| |||||
Sbjct 289 GTACTAAAACAAAATTAATACATAAAGCGTATCATAATTTTTATAATTCAAAAGTTTTAA 348
Query 2746 GTTTTTTGACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATT 2805
||||| | |||||||||||||| | |||| | ||||| |||| ||| ||| |||||
Sbjct 349 GTTTTGTTACTTTAACTTATGCTGATAATATGCAAGATATTAATAAAGCAAAACATGATA 408
Query 2806 TAAAGTTATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATC 2865
| |||| ||||| | |||| ||||||||||| | |||| ||| ||||| ||
Sbjct 409 TTGCTATATTCTTTAAACGTTTAAAACGTTGATGAAATGACCCTAAACGTGCTAAATAT- 467
Query 2866 ATAAAGGAATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACT 2925
|| ||| ||||||||||||||| |||||| |||||||||||||| || ||||||
Sbjct 468 TTAGGTGAA--TTAAAATATATGTATGTTTATGAATATCAAAAACGCGGTGCTATTCACT 525
Query 2926 TTCATATCATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAAT 2973
||||||| |||| || ||||||| ||| ||| | | | |||||
Sbjct 526 TTCATATATTATTTAATAGGAAAATACATAAAAGTATGTTGCCACAAT 573
>seq1167
Length=987
Score = 199 bits (220), Expect = 2e-47
Identities = 292/408 (72%), Gaps = 5/408 (1%)
Strand=Plus/Minus
Query 2567 TGGTAATTATGTTAAAAATATTGTTTTACCACT-AGAATTAGTtaataataatcctcgta 2625
|||| ||||||||||||||| ||||||| | || || | | |||||| ||||
Sbjct 773 TGGTGCTTATGTTAAAAATATAATTTTACCTATGAGCGCTATATTA-AATAATAAACGTA 715
Query 2626 ataaaatgggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTC 2685
|| || | || |||||||| || | ||||||||||| || |||||| |||||
Sbjct 714 ATGAAGTTGGTATTAAAAATTTAGGTATTAATGATAAAAAGTTACTTAATAGTACTATTC 655
Query 2686 GCTCGCAAGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAA 2745
| | || || | || | ||||||| | | ||||||| |||| ||| |||||
Sbjct 654 GTACTAAAACAAGATTAATACATAAAGCATTTCATAATTTTTATAATTCAAAAGTTTTAA 595
Query 2746 GTTTTTTGACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATT 2805
||||| | |||||||||||||| | ||| ||||||| |||| ||| ||| |||||
Sbjct 594 GTTTTGTTACTTTAACTTATGCAGATAACATGAAAGATATTAATAAAGCAAAACATGATA 535
Query 2806 TAAAGTTATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATC 2865
| |||| ||||| | |||| ||||||||||| | |||| ||| ||||| ||
Sbjct 534 TTGCTATATTCTTTAAACGTTTAAAGCGTTGATGAAATGACCCTAAACGTGCTAAATAT- 476
Query 2866 ATAAAGGAATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACT 2925
|| ||| ||||||||||||||| ||| || ||||||||||| || || |||| |
Sbjct 475 TTAGGTGAA--TTAAAATATATGTATGTTTACGAATATCAAAAACGTGGTGCTATTCATT 418
Query 2926 TTCATATCATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAAT 2973
||||||| |||| ||| |||||||| ||| ||| | ||| |||||
Sbjct 417 TTCATATACTATTTAACAGAAAAATACATAAGAGTATGTTACCACAAT 370
>seq1075
Length=1389
Score = 150 bits (166), Expect = 8e-33
Identities = 287/421 (68%), Gaps = 9/421 (2%)
Strand=Plus/Plus
Query 2573 TTATGTTAAAAATATTGTTTTACCACTAGAATTAGTtaataataatcctcgtaataaaat 2632
||||||||||||| | |||||||| | || | ||||||| | | |||||||
Sbjct 117 TTATGTTAAAAATGTAGTTTTACCTATTTCTTTTTTAAATAATATTG---GAAATAAAAA 173
Query 2633 gggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCGCTCGCA 2692
|| |||| | || ||| | |||||||| | |||||| | ||||| | |
Sbjct 174 AGG---TAAATGTTATGTTGGTAATAAACAAAAATTGAGAAATAGTACTGTTCGCACTAA 230
Query 2693 AGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTT 2752
| |||| |||| || |||| | ||||||| ||| |||||| ||||||||| |
Sbjct 231 AACTAATTTAATTCAAAAGGCATTACATAATTTTTATAATAGTAAAATGTTAAGTTTTAT 290
Query 2753 GACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTT 2812
|||||||| ||| | |||| | |||||||||||||| ||||| ||| | ||
Sbjct 291 TACTTTAACATATAAAGATAATATGCAAGATGTTAAAAAAGCAAAAAAAGATATTGGTTT 350
Query 2813 ATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGG 2872
|||||||| ||| |||| |||||||| | |||| |||| | || ||| ||
Sbjct 351 ATTTTTTATTAAATTAAAGAAATGATGAAATGACCCTAAACGTTTTGAA---CATTTGGG 407
Query 2873 AATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATAT 2932
| ||||||||| | ||| |||||| |||||| | || || || ||||| ||||||||
Sbjct 408 AGAATTAAAATATTTTTATGTTTATGAATATCAAGACCGTGGTGCGGTTCATTTTCATAT 467
Query 2933 CATATTAAACCAAAAAATACCTAACAGTGTTGTACAACAATACTGAAAACACGGTATTAA 2992
|| || || ||| |||| ||| ||| | | | ||| |||| || ||| ||||
Sbjct 468 AATTTTTAATAGAAAGATACATAAAAGTATGTTGGCAGAATGATGAACTCATGGTTTTAA 527
Query 2993 T 2993
|
Sbjct 528 T 528
>seq1257
Length=764
Score = 145 bits (160), Expect = 3e-31
Identities = 231/327 (71%), Gaps = 11/327 (3%)
Strand=Plus/Minus
Query 2712 GCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTTGACTTTAACTTATGCCGTT 2771
|| ||| | ||||||| || ||||| |||||||||| | |||||||||||||| |
Sbjct 724 GCTTATCATAATTTTTATGATAGTAAAGTTTTAAGTTTTGTTACTTTAACTTATGCTGAA 665
Query 2772 AATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTTATTTTTTAATAATATAAAT 2831
||| ||||||||||||| ||| || || | ||||||||||| | | ||
Sbjct 664 AATATGAAAGATGTTAAACTGGCAAAATATCATATTGCTTTATTTTTTAAACGTTTGAAA 605
Query 2832 CGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGGAATTTTAAAATATATGTAT 2891
|||||||| ||||||| ||| | ||||| || ||| ||||||||| | |||
Sbjct 604 AAGTGATGAAATAATCCTAAGCGTGC--AAAAT-ATTTAGGTGAGTTAAAATATCTTTAT 548
Query 2892 ACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATATCATATTAAACCAAAAAATA 2951
|||||||||||||||||| || |||||||| || ||||| | || || |||||||
Sbjct 547 GTTTATGAGTATCAAAAACGTGGTGCAGTTCATTTCCATATACTTTTTAATAGAAAAATA 488
Query 2952 CCTAACAGTGTTGTACAACAATACTGAAAACACGGTATTAATAAAAATATTAAAGTTCGT 3011
| ||| ||| | | | ||||| ||| | ||||||||| || | | |||| ||
Sbjct 487 CATAAAAGTATGTTGCCACAATGATGACCATTTGGTATTAAT---GATGTAAGAGTT-GT 432
Query 3012 GC----AGGTTCTAATGAAGATGTTGT 3034
| |||| |||||||| |||| ||
Sbjct 431 TCAAAAAGGTACTAATGAAAATGTAGT 405
>seq973
Length=1907
Score = 140 bits (154), Expect = 1e-29
Identities = 263/382 (69%), Gaps = 10/382 (3%)
Strand=Plus/Plus
Query 2573 TTATGTTAAAAATATTGTTTTACCACTAGAATTAGTtaataataatcctcgtaataaaat 2632
|||||||||||||||||||||||| | || |||| ||||| | | ||||| |
Sbjct 1152 TTATGTTAAAAATATTGTTTTACCTATTTCTTT--TTAA--ATAATATTGGAAATAAGAA 1207
Query 2633 gggagttaaaaatactggaaaaaatgataaaaaatTGTGGAATAGTCGTATTCGCTCGCA 2692
|| |||| | || ||| | | ||||| | |||| | | |||| | |
Sbjct 1208 AGG---TAAATGTTATGTTGGTAATAAGCAGAAATTAAGAAATAATACTGTTCGTACTAA 1264
Query 2693 AGGAAATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTT 2752
| |||| |||| ||||||| | ||||||| ||| |||| | ||| |||||| |
Sbjct 1265 AAATAATTTAATTCAAAAAGCATTGCATAATTTTTATAATAGTAATATTTTGAGTTTTGT 1324
Query 2753 GACTTTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTT 2812
|||||||||||| | ||| | ||||||||||| || ||||| || | ||
Sbjct 1325 TACTTTAACTTATAAAGAAAATATGCAAGATGTTAAACAAGCAAAAAAAGACATTCGTTT 1384
Query 2813 ATTTTTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGG 2872
||||||| ||| |||| |||||||| | |||| ||| || || || || |
Sbjct 1385 ATTTTTTCTTAAATTAAAGAAATGATGAAATGACCCTAAGCGTGCTGAATAT-ATGGGTG 1443
Query 2873 AATTTTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATAT 2932
|||| ||||||||||||| |||||| |||||| | || |||||||| || ||||||||
Sbjct 1444 AATT--AAAATATATGTATGTTTATGAATATCAAGACCGTGGAGCAGTACATTTTCATAT 1501
Query 2933 CATATTAAACCAAAAAATACCT 2954
|| || || ||||||||||
Sbjct 1502 AATTTTTAATAGAAAAATACCT 1523
>seq1217
Length=851
Score = 129 bits (142), Expect = 3e-26
Identities = 184/257 (72%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 2697 AATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTTGACT 2756
|||| |||| ||||||| | ||||||| ||| |||||| || |||||| | |||
Sbjct 111 AATTTAATTCAAAAAGCATTACATAATTTTTATAATAGTAAAATGTTGAGTTTTGTTACT 170
Query 2757 TTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTTATTT 2816
||||||||| | ||| | ||||||||||| ||| ||||| ||| | || |||
Sbjct 171 TTAACTTATAAAGAAAATATGCAAGATGTTAAACAATCAAAAAAAGATATTCGTTTGTTT 230
Query 2817 TTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGGAATT 2876
||| ||| |||| || ||||| | || | ||| ||||| || || |||
Sbjct 231 TTTCTTAAATTAAAAAAATGGTGAAATGACCCAAAGCGTGCTAAATAT-ATGGGTGAA-- 287
Query 2877 TTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATATCATA 2936
||||||||||||||| |||||| |||||| | || |||||||| || |||||||| ||
Sbjct 288 TTAAAATATATGTATGTTTATGAATATCAAGACCGTGGAGCAGTACATTTTCATATAATT 347
Query 2937 TTAAACCAAAAAATACC 2953
|| || ||| |||||
Sbjct 348 TTTAATAGAAAGATACC 364
>seq1112
Length=1225
Score = 123 bits (136), Expect = 1e-24
Identities = 169/234 (72%), Gaps = 3/234 (1%)
Strand=Plus/Plus
Query 2721 AATTTTTGAAATTGTAAAAATTTAAGTTTTTTGACTTTAACTTATGCCGTTAATGAGAAA 2780
||||||| ||| |||| | ||||||||| | |||||||||||||| | ||| | ||
Sbjct 383 AATTTTTATAATAGTAATATGTTAAGTTTTGTTACTTTAACTTATGCTGAAAATATGCAA 442
Query 2781 GATGTTAAAAAATGTAAAAATGATTTAAAGTTATTTTTTAATAATATAAATCGTTGATGA 2840
||||||||| || ||||| ||| | ||||||||| ||| |||| ||||||
Sbjct 443 GATGTTAAACAAGCAAAAAAAGATATTCGTTTATTTTTTCTTAAATTAAAGAAATGATGA 502
Query 2841 AACAATCCTATTCGTTCTAAAAATCATAAAGGAATTTTAAAATATATGTATACTTATGAG 2900
|| | |||| ||||||||| || || ||| || ||| || | ||| ||||||
Sbjct 503 AATGACCCTAAACGTTCTAAATAT-TTAGGTGAA--TTGAAACATTTTTATGTTTATGAA 559
Query 2901 TATCAAAAACGCGGAGCAGTTCACTTTCATATCATATTAAACCAAAAAATACCT 2954
|||||| | || || || ||||| |||||||| || || || ||| ||||||
Sbjct 560 TATCAAGACCGTGGTGCGGTTCATTTTCATATAATTTTTAATAGAAAGATACCT 613
>seq1244
Length=789
Score = 120 bits (132), Expect = 1e-23
Identities = 179/252 (71%), Gaps = 3/252 (1%)
Strand=Plus/Plus
Query 2709 AAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTTGACTTTAACTTATGCC 2768
||||||| | |||||||| || || ||| ||||||||| | ||||||||||||
Sbjct 143 AAAGCATTACATAATTTTTGTGATAGTCAAATGTTAAGTTTTCTTACTTTAACTTATAAA 202
Query 2769 GTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTTATTTTTTAATAATATA 2828
| |||| | ||||| ||| |||| ||||| ||| | ||||||||| ||| ||
Sbjct 203 GATAATATGCAAGATATTAGAAAAGCAAAAAAAGATATTCGTTTATTTTTTCTTAAATTA 262
Query 2829 AATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGGAATTTTAAAATATATG 2888
|| |||||||| | |||| ||||||||| || || ||| || ||| || |
Sbjct 263 AAGAAATGATGAAATGACCCTAAACGTTCTAAATAT-TTAGGTGAA--TTGAAACATTTT 319
Query 2889 TATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATATCATATTAAACCAAAAA 2948
||| |||||| |||||| | || || || ||| | ||||||||| | || || | |||
Sbjct 320 TATGTTTATGAATATCAAGACCGTGGTGCGGTTTATTTTCATATCTTGTTTAATCGTAAA 379
Query 2949 ATACCTAACAGT 2960
|||||| | |||
Sbjct 380 ATACCTTATAGT 391
>seq768
Length=3935
Score = 114 bits (126), Expect = 6e-22
Identities = 204/297 (69%), Gaps = 3/297 (1%)
Strand=Plus/Minus
Query 2697 AATTGTATTCGGAAAGCATATGAAAATTTTTGAAATTGTAAAAATTTAAGTTTTTTGACT 2756
|||| |||| ||||||| | ||||||| ||| |||| | || |||||| | |||
Sbjct 720 AATTTAATTCAAAAAGCATTACATAATTTTTATAATAGTAAGATGTTGAGTTTTGTTACT 661
Query 2757 TTAACTTATGCCGTTAATGAGAAAGATGTTAAAAAATGTAAAAATGATTTAAAGTTATTT 2816
||||||||| |||| | |||||||||||||| ||||| ||| | ||||||
Sbjct 660 TTAACTTATAGTAATAATATGCAAGATGTTAAAAAAGCAAAAAAAGATATTCGTTTATTT 601
Query 2817 TTTAATAATATAAATCGTTGATGAAACAATCCTATTCGTTCTAAAAATCATAAAGGAATT 2876
||| ||| |||| |||||||| | |||| |||| | ||| ||||
Sbjct 600 TTTCTTAAATTAAAGAAATGATGAAATGACCCTAAACGTTTT---TTGCATTTAGGAGAA 544
Query 2877 TTAAAATATATGTATACTTATGAGTATCAAAAACGCGGAGCAGTTCACTTTCATATCATA 2936
||||||||| | ||| ||||||||||||| || || || | || |||||||| ||
Sbjct 543 TTAAAATATTTTTATGTTTATGAGTATCAATCTCGTGGTGCTATACATTTTCATATAATT 484
Query 2937 TTAAACCAAAAAATACCTAACAGTGTTGTACAACAATACTGAAAACACGGTATTAAT 2993
|| || ||| |||| ||| ||| | || | ||| |||| || ||| |||||
Sbjct 483 TTTAATAGAAAGATACATAAAAGTATGTTAGCAGAATGATGAACTCATGGTTTTAAT 427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 21724433638404
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