Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_030296.1 Length=5071 Score E Sequences producing significant alignments: (Bits) Value seq2827 746 0.0 >seq2827 Length=27228 Score = 746 bits (826), Expect = 0.0 Identities = 541/625 (87%), Gaps = 6/625 (1%) Strand=Plus/Plus Query 293 CTTCAGTATGGATTGTTCAGCGGACGGAAAATTTAAACGTTTGGATTGTTTGTGTTACTT 352 ||| |||||||| |||||||| | |||||||| ||||| | ||||| ||||||| || Sbjct 7552 CTTTAGTATGGACTGTTCAGCAGCGAGAAAATTTGAACGTCTTGATTGCGTGTGTTATTT 7611 Query 353 TTGTTTACTTCCAAAATTGCCAACACCAGTAGTGAGTATAGTTCCGACGA---TGAGTTC 409 |||| | | ||||||||||||||||||||||||| | |||||||||||| ||||||| Sbjct 7612 TTGTCTTTTACCAAAATTGCCAACACCAGTAGTGAATTTAGTTCCGACGAGGATGAGTTC 7671 Query 410 GAACGAGGATTCGTGTCAATCTCTAAACGGCGAGGATCCGTTGAGTTCGGCTCCAGCGAG 469 |||||||||||||||| || | | || |||||||| ||||||| ||||||||||| Sbjct 7672 CGACGAGGATTCGTGTCACTCGGTGATCGAGGAGGATCCTCTGAGTTCTGCTCCAGCGAG 7731 Query 470 TCCGGCGACGAGTCAACATGGGCACAATTTAAGCGATTCCGAGGAGACGAATTGTACCGT 529 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct 7732 TCCGGCGACGAGTCAACATGGTCACAACTTAAGCGATTCCGAGGAGACGAACTGTACCGT 7791 Query 530 CGTATTGGCACAGAATCCCCTGCCCGATACACAAGAAGTCGAGTCAATGTTCCAAGAGGA 589 ||| ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct 7792 CGTGTTGGCACAGAATCCCCTGCCCGACACACAAGAAGTCGAATCGATGTTTCAAGAAGA 7851 Query 590 TCACCGGAACGTGTCAGTACATTTCGCGGAAGAGACAGTGACTCCGGCTCGGAAGAAGAA 649 ||||| || |||||||||||||| || || | ||| || ||||||||||| Sbjct 7852 ---CCGGAGCGCATCAGTACATTTCGCAGACGATCCTCCGACGGGAGCCCGGAAGAAGAA 7908 Query 650 ATCTATACTGAAACGGACGATGAAAAAGAAAACAACTCCCAAAGTGACCACGGCGAAGAA 709 |||||| ||||||||| ||| |||||||||||| |||||||||| || ||| |||||||| Sbjct 7909 ATCTATTCTGAAACGGGCGACGAAAAAGAAAACGACTCCCAAAGCGAACACAGCGAAGAA 7968 Query 710 GATGTTGACACTGACTCATCAGCAACAGATATCAGTGTGGGAACGGCAAACCAACAACTT 769 |||| | || ||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 7969 GATGCTCACTCTGACTCCTCAGCAACAGACATCAGTGTGGGAACGGCAAACCAACAACTT 8028 Query 770 TATGGCGTTCCTGTTTCTCGTCTGGACTCCTATGCAGACCGTTCACCTTCTCCAGGACCT 829 |||||| ||| |||| ||||| || || || |||||||||||||||||||||||||||| Sbjct 8029 TATGGCATTCTTGTTCCTCGTTTGAACGCCCCTGCAGACCGTTCACCTTCTCCAGGACCT 8088 Query 830 TCTACTGCATATCGCTATTGTAGCGAGGAAAACCCAAAATGTGGACCTAAAAAAGCAGTG 889 |||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| Sbjct 8089 TCTACTGCATATCGCTATCGTGGCGAGGAAAACCCAAAATATGGACCTAAAAAAGCAGTG 8148 Query 890 CATCCGTTGGGGGGAAGGCTTGGCG 914 ||||||||||||||||||||| ||| Sbjct 8149 CATCCGTTGGGGGGAAGGCTTAGCG 8173 Score = 127 bits (140), Expect = 7e-26 Identities = 92/109 (84%), Gaps = 12/109 (11%) Strand=Plus/Plus Query 4963 CCTTCGGCCGGTGCACGGGAAAATCAAGGAAAATCTAGGTCTCATGCTGCTGTTGTCGGT 5022 ||||||||||||||||||||||||| ||||| || |||||||||| ||| Sbjct 14850 CCTTCGGCCGGTGCACGGGAAAATC------------GGTCTTATACTGCTGTTGTTGGT 14897 Query 5023 GCTGCATTCTAGAAAGAGTTTGGAGTGAAAGAACCACTCCAAAAGTACT 5071 ||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 14898 GCTGCATTCTATAAAGAGTTTGGAGTGAAAGGACCACTCCAAAAGTACT 14946 Score = 127 bits (140), Expect = 7e-26 Identities = 92/109 (84%), Gaps = 12/109 (11%) Strand=Plus/Minus Query 1 AGTACTTTTGGAGTGGTTCTTTCACTCCAAACTCTTTCTAGAATGCAGCACCGACAACAG 60 ||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct 14946 AGTACTTTTGGAGTGGTCCTTTCACTCCAAACTCTTTATAGAATGCAGCACCAACAACAG 14887 Query 61 CAGCATGAGACCTAGATTTTCCTTGATTTTCCCGTGCACCGGCCGAAGG 109 ||| || ||||| ||||||||||||||||||||||||| Sbjct 14886 CAGTATAAGACC------------GATTTTCCCGTGCACCGGCCGAAGG 14850 Score = 123 bits (136), Expect = 8e-25 Identities = 86/97 (89%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 129 GGAAAATCTAGGTCTCATGCTGCTGTTGTCGGTGCTGCATTCTAGAAAGAGTTTGGAGTG 188 |||||||| ||||| || |||||||||| |||||||||||||| ||||||||||||||| Sbjct 14867 GGAAAATC--GGTCTTATACTGCTGTTGTTGGTGCTGCATTCTATAAAGAGTTTGGAGTG 14924 Query 189 AAAGAACCACTCCAAAAGTACTTTGCGTGTTTATCTC 225 |||| ||||||||||||||||| ||||||||| || Sbjct 14925 AAAGGACCACTCCAAAAGTACTCCACGTGTTTATGTC 14961 Score = 123 bits (136), Expect = 8e-25 Identities = 83/92 (90%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 4852 AAATACATGGAGTACTTTTGGAGTGGTTCTTTCACTCCAAACTCTTTCTAGAATGCAGCA 4911 ||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 14956 AAACACGTGGAGTACTTTTGGAGTGGTCCTTTCACTCCAAACTCTTTATAGAATGCAGCA 14897 Query 4912 CCGACAACAGCAGCATGAGACCTAGATTTTCC 4943 || |||||||||| || ||||| |||||||| Sbjct 14896 CCAACAACAGCAGTATAAGACC--GATTTTCC 14867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16086647995120