Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_001954.1 Length=8454 Score E Sequences producing significant alignments: (Bits) Value SEQ45673 208 4e-50 >SEQ45673 Length=569 Score = 208 bits (230), Expect = 4e-50 Identities = 364/516 (71%), Gaps = 34/516 (7%) Strand=Plus/Plus Query 5548 GAGTTAACCAGTACCGAAAGCTGCACTGTTGGTGGGTATTCGATCAGCATGTGGACATCA 5607 ||| | ||||||||||| ||| |||| ||||| | ||| || ||||||||||| |||| | Sbjct 11 GAGGTCACCAGTACCGATAGCAGCACCGTTGGCGCGTACTCTATCAGCATGTGAACATGA 70 Query 5608 TCGTACGTCTCCGTTACTTTCTTTAAGTTCCTCGCCCCAAAATCACGGCAGCACTTCTGC 5667 || | ||||||| || ||||| |||||| || |||||||| | ||| || ||||| Sbjct 71 TCAGCC-TCTCCGTCACACTCTTTCAGTTCC--GCACCAAAATCTCTGCAA-ACCTCTGC 126 Query 5668 CTGCATACTGATGAAATGGCTGCACAGTGTAACTCTCCCAGTATC---TTTCGACGGTAT 5724 | ||| ||||| || || || || | || |||| |||| |||||| || Sbjct 127 C-GCACACTGACCGAA-GGAAGCGTGATGCAGATCCCCCAATATCGGCTTTCGA---TAC 181 Query 5725 TTTGTTACAAAGACGAAGATGAACATGCAAAAGGAAGGCAGCATGTCTTGAACGATTGAT 5784 || || | ||| || || ||| || ||||||| | |||| ||||| | ||| ||| || Sbjct 182 TTGGTGATAAACACCAA-ATGTACGTGCAAAACGTAGGCCGCATGGCGTGATTTATTAAT 240 Query 5785 TTTATATTTTTGCATTGAGG-------TTGGCCGTAAAAGCAGTAATATTGCAAGAAAAT 5837 |||| ||||||| | | || | ||| || |||| |||| || Sbjct 241 TTTAGTGAATTGCATTCTGTCACTCAATCGGGCTTAATAG-----ATATGGCAATAAT-- 293 Query 5838 CTAGCTACACACTGAATGATGA-TGCTAATCCTGAAAGCCTACAAATTCAGACTGGAACC 5896 |||||||||||| | | | ||| ||| |||||||||||||||||| |||| ||||| Sbjct 294 ---GCTACACACTGAGCGCTAAATGCAAATTCTGAAAGCCTACAAATTCCGACTCGAACC 350 Query 5897 AACGCCTGAACAGTCGCAGCGTTTGCGGCAGTTATGCGGTTGCGCCCGTTTTGTCTGGAA 5956 || | |||| |||| || |||| ||||| ||||||| || |||| ||||||||| Sbjct 351 GACAGCCCAACAAGCGCAACGCCTGCGCCAGTTGGGCGGTTGTGCTCGTTATGTCTGGAA 410 Query 5957 TTTAGGTCTTGCGGAGACAAAGCGCATACTTGACTCAGGCGAAAAGTTACCTTCGGCTTT 6016 | || || || || || || ||||| || || | |||||||| | ||||| || || Sbjct 411 TCACGGGCTGGCAGAAACCAAACGCATTCTGGATGCTGGCGAAAAACTGCCTTCTGCCTT 470 Query 6017 CGAGTTGAACCGGAGTGATTA-CAGTGTGGAAAAAA 6051 ||| ||||||||| || | | |||| ||||| ||| Sbjct 471 TGAGCTGAACCGGA-TGCTCACCAGT-TGGAAGAAA 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26923627971960